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Variability in Rhizoctonia solani from
different host crops
Submitted By :
KAMAL SINGH PATEL
Roll No. 6375
Deptt. of Plant Pathology, College of Agriculture, Rewa
JAWAHARLAL NEHRU KRISHI VISHWA
VIDYALAYAJABALPUR (M.P.)
Credit Seminar
on
Introduction
 Rhizoctonia solani is the most widely known
and most studied species of genus
Rhizoctonia.
 R. solaniis soilborne Basidiomycete occurring
world-wide, with complex biology. Its highly
destructive lifestyle as a non-obligate
parasite causes necrosis and damping-off on
numerous host plant species. Because of the
lack of conidia and the scarcity of the sexual
spores, R. solani exists as vegetative hyphae
and sclerotia in nature.
 Sclerotia are an encapsulated, tight hyphal
clump that protects and preserves the fungus
over non-optimal times.
 The fungus is dispersed mainly via sclerotia,
contaminated plant material or soil spread by
wind, water or during agricultural practices
such as tillage and seed transportation. The
fungus can stay in the soil as a saprophyte for
long periods.
 The host range of R. solani is wide and it
causes various diseases on important crop
plants of the world (Table) including species
in the Solanaceae, Fabaceae, Poaceae etc.
 Disease symptoms include leaf blights, leaf
spots, damping-off, rots on roots, shoots
and fruits, canker lesions on sprouts and
stolons, and sclerotial diseases.
Rhizoctonia solani J.G. Kühn has a
significant economic impact in the
development and production of a wide
variety of crops. It is considered a
complex species because its
physiological and pathogenic variability.
Disease symptoms and
host range of different
anastomosis (AG) groups
of Rhizoctonia solani.
Table 1. Disease symptoms and host range of different anastomosis (AG) groups of Rhizoctonia
solani.Anastomosis
group
Symptomsa Host Reference
AG1
AG2
sheath blight
web blight
bud rot
root rot
stem canker
sheath blight
leaf blight
damping-off
Rice
common bean
soybean
sugarbeet
Potato
rice
sugarbeet
soybean
Sayler and
Yang 2007
Muyolo et al.
1993
Hwang et al.
1996
Herr 1996
Chand and
Logan 1983
Hashiba and
Kobayashi
1996
Herr 1996
Nelson et al.
1996
Anastomosis
group
Symptomsa Host Reference
AG4
AG5
stem canker
fruit rot
root rot
root rot
root rot
root rot
root rot
stem canker
root rot
root rot
potato
tomato
soybean
wheat
pea
common bean
cotton
potato
soybean
barley
Anguiz and
Martin 1989
Strahnov et al.
1985
Liu and Sinclair
1991
Rush et al. 1994
Hwang et al.
2007
Muyolo et al.
1993
Rothrock 1996
Bandy et al. 1984
Nelson et al.
1996
Rush et al. 1994
Anastomosis
group
Symptomsa Host Reference
AG6
AG7
AG8
AG9
AG10
AG11
AG12
AG13
Mycorrhizal
root canker
bare patch
minor
pathogen
minor
pathogen
not pathogenic
mycorrhizal
minor
pathogen
Cotton
cereals
potato
Lupin
cotton
Carling et al.
1999
Baird and
Carling 1997
Mazzola et al.
1996
Carling et al.
1994
MacNish et al.
1995
Eken and
Demirci 2004
Carling et al.
1999
Carling et al.
2002a
Culture and physiological variability in
Rhizoctonia solani
Rhizoctonia solani isolated from soybean growing in tarai
regions of Uttarakhand. Six isolates of R. solani has been
characterized on the basis of cultural and physiological
nature such as colony diameter, growth, colour and sclerotia
formation were recorded.
Potato Dextrose Agar (PDA) was found best for growth and
development. Two isolates covered the whole plates (90
mm) in 48 hrs. However, maximum number of sclerotia and
weight was recorded on Czapek Dox agar medium. Overall
radial growth supporting is recorded Corn Meal Agar
Medium.
Varied range of temperatures i.e. 10, 15, 25, 30, 35 and 400C
was tested and found better growth of different isolates of R.
solani at 10 - 400C, with an optimum growth temperature at
300C.
Isolates were grown on five broth media (Asthana &
Hawkers, Potato Dextrose Agar, Czapek’s Dox Agar,
Corn Meal Agar and Richards Agar) for fresh, dry
weight and oat meal broth culture filtrates of all
isolates was used in phytotoxic effects. It recorded
that maximum fresh and dry weight was observed on
corn meal agar medium.
The maximum reduction in radical and plumule
length of germinating seeds were recorded in
Haldichaur isolate.
Morphological characterization
 Isolates of R. solani were subcultured on
PDA poured Petri dishes in triplicate and
incubated at 25oC for 3-5 days. Mycelial and
sclerotial parameters were recorded for
each isolate. as virulent; 30-49%, as
moderately virulent and 10-29% as least
virulent.
Rhizoctonia Damping-Off and Stem Rot of Soybeans
 Rhizoctonia damage may occur at any time during the
growing season, but it is more severe on young
seedlings.
 Rhizoctonia solani can cause seed rot, root rot, and
lesions on hypocotyls. Damping-off occurs when
germinating seedlings are infected prior to or just after
emergence.
 On hypocotyls, lesions are reddish-brown and sunken.
Diseased seedlings collapse from the firm, dry canker
that girdles the hypocotyl.
 Diseased older plants become chlorotic, resembling
plants with nitrogen deficiency.

variability in Symptoms
Symptoms on older plants, or on those plants that
survive seedling infections, include the
characteristic sunken, reddish-brown cankers on
the lower stem near the soil surface.
Disease losses result from stand reduction in
newly planted fields and premature death of
diseased plants that produce undersized seed.
Rhizoctonia stem rot—yellowed,
stunted, infected plants in the field.
Premature yellowing caused by
Rhizoctonia solani, stem rot.
 Damage caused by Rhizoctonia is
frequently confused with diseases caused
by other seedling pathogens. It is very
difficult to identify the pathogen that
causes preemergence damping-off.
 The symptoms are very similar for
Pythium, Phytophthora, and Rhizoctonia.
 Rhizoctonia infected plants typically have
characteristic and distinct reddish-brown,
sunken cankers on the lower stem or
hypocotyl.
 Older plants with Phytophthora stem rot
have chocolate brown lesions that extend
up the stem several nodes on older plants.
Characteristic reddish-brown
sunken cankers on the hypocotyl
caused by Rhizoctonia solani.
 The most common symptom is wilting of the leaves, starting with the
oldest leaves, and is likely a consequence of damage to the vascular
system (Figures 1 and 3).
 Leaves may or may not become yellow. In some instances, the petioles
may blacken where they are attached to the crown (Figure 2).
 Crown rot infection probably is initiated when infected soil is thrown into
crowns during cultivation, by rain splash of infected soil into the crowns or
where the petiole attachment to the crown is covered with infected soil
(Figure 2).
Rhizoctonia Root and Crown Rot of
Sugarbeet
Figure 1. Wilting of oldest leaves fi rst and
yellowing of plants infected with R. solani.
Figure 2. Blackening of petioles and infection at
the soil level.
 Root rot infection typically starts at or just below the soil line
(Figure 3), and sometimes lower on the tap root (Figure 4).
 Root symptoms may range from scattered brown to
black lesions on the root surface to complete rotting of the root.
Initially, the disease may occur in a few patches in a fi eld. If signifi
cant inoculum is present, often as a result of continuous planting
of susceptible hosts, entire sugarbeet fi elds may be lost to the
disease when conditions are favorable for disease development.
Figure 3. Rhizoctonia root rot-infected plant
with yellow leaves showing infection
starting on the root just below the soil line.
Figure 4. Rhizoctonia solani-infected
plant with rot symptoms on the lower
part of the tap root.
 Genetic variability of R. solani on potato
Rhizoctonia disease symptoms on potato by
isolating field strains from important potato
growing areas. The majority of the samples
were taken from areas practicing intensive
potato cultivation and production of high
quality seed tubers.
In Rhizoctonia samples associated
with potato were isolated, of which 52.7%
originated from canker lesions on stems and
roots . Almost as many isolates were
assembled from sclerotia (42.7%) either from
tubers or from roots .
Genetic variability of Sheath blight of rice
Variability in 35 isolates of Rhizoctonia solani Kuhn causing
sheath blight of rice and weeds, was examined by
polymerase chain reaction-random amplified polymorphic
DNA (PCR - RAPD) analysis in conjunction with morphology
and pathogenicity studies.
 Studies on morphological characterization of R.
solani isolates showed that isolates were highly variable
both in mycelial and sclerotial parameters, with no
consistent characters related to virulence, origin, production
system or geographic origin. Pathogenicity of R. solani was
also evaluated and based on their virulence, isolates were
classified into different virulent groups.
 The similarity values of RAPD profiles ranged from
0.37 to 0.85 with an average of 0.61 among all the isolates.
The percentage polymorphism detected per primer varied
from 76.9 to 100% which suggested their utility in DNA
finger printing of the sheath blight isolates.
Conclusion
Rhizoctonia Solani is a multiphagous
pathogen and posses a great threat to
plants. It survives in soil through
formation of sclerotia which are hard
resting structures of the pathogen.
Sclerotia formation is not
formed in all diseases but present in
most of the crops. It can be effectively
manged using biological and chemical
control measures.
Variability in  rhizoctonia solani from different host crops

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Variability in rhizoctonia solani from different host crops

  • 1.
  • 2. Variability in Rhizoctonia solani from different host crops Submitted By : KAMAL SINGH PATEL Roll No. 6375 Deptt. of Plant Pathology, College of Agriculture, Rewa JAWAHARLAL NEHRU KRISHI VISHWA VIDYALAYAJABALPUR (M.P.) Credit Seminar on
  • 3. Introduction  Rhizoctonia solani is the most widely known and most studied species of genus Rhizoctonia.  R. solaniis soilborne Basidiomycete occurring world-wide, with complex biology. Its highly destructive lifestyle as a non-obligate parasite causes necrosis and damping-off on numerous host plant species. Because of the lack of conidia and the scarcity of the sexual spores, R. solani exists as vegetative hyphae and sclerotia in nature.  Sclerotia are an encapsulated, tight hyphal clump that protects and preserves the fungus over non-optimal times.
  • 4.  The fungus is dispersed mainly via sclerotia, contaminated plant material or soil spread by wind, water or during agricultural practices such as tillage and seed transportation. The fungus can stay in the soil as a saprophyte for long periods.  The host range of R. solani is wide and it causes various diseases on important crop plants of the world (Table) including species in the Solanaceae, Fabaceae, Poaceae etc.  Disease symptoms include leaf blights, leaf spots, damping-off, rots on roots, shoots and fruits, canker lesions on sprouts and stolons, and sclerotial diseases.
  • 5. Rhizoctonia solani J.G. Kühn has a significant economic impact in the development and production of a wide variety of crops. It is considered a complex species because its physiological and pathogenic variability.
  • 6. Disease symptoms and host range of different anastomosis (AG) groups of Rhizoctonia solani.
  • 7. Table 1. Disease symptoms and host range of different anastomosis (AG) groups of Rhizoctonia solani.Anastomosis group Symptomsa Host Reference AG1 AG2 sheath blight web blight bud rot root rot stem canker sheath blight leaf blight damping-off Rice common bean soybean sugarbeet Potato rice sugarbeet soybean Sayler and Yang 2007 Muyolo et al. 1993 Hwang et al. 1996 Herr 1996 Chand and Logan 1983 Hashiba and Kobayashi 1996 Herr 1996 Nelson et al. 1996
  • 8. Anastomosis group Symptomsa Host Reference AG4 AG5 stem canker fruit rot root rot root rot root rot root rot root rot stem canker root rot root rot potato tomato soybean wheat pea common bean cotton potato soybean barley Anguiz and Martin 1989 Strahnov et al. 1985 Liu and Sinclair 1991 Rush et al. 1994 Hwang et al. 2007 Muyolo et al. 1993 Rothrock 1996 Bandy et al. 1984 Nelson et al. 1996 Rush et al. 1994
  • 9. Anastomosis group Symptomsa Host Reference AG6 AG7 AG8 AG9 AG10 AG11 AG12 AG13 Mycorrhizal root canker bare patch minor pathogen minor pathogen not pathogenic mycorrhizal minor pathogen Cotton cereals potato Lupin cotton Carling et al. 1999 Baird and Carling 1997 Mazzola et al. 1996 Carling et al. 1994 MacNish et al. 1995 Eken and Demirci 2004 Carling et al. 1999 Carling et al. 2002a
  • 10. Culture and physiological variability in Rhizoctonia solani Rhizoctonia solani isolated from soybean growing in tarai regions of Uttarakhand. Six isolates of R. solani has been characterized on the basis of cultural and physiological nature such as colony diameter, growth, colour and sclerotia formation were recorded. Potato Dextrose Agar (PDA) was found best for growth and development. Two isolates covered the whole plates (90 mm) in 48 hrs. However, maximum number of sclerotia and weight was recorded on Czapek Dox agar medium. Overall radial growth supporting is recorded Corn Meal Agar Medium. Varied range of temperatures i.e. 10, 15, 25, 30, 35 and 400C was tested and found better growth of different isolates of R. solani at 10 - 400C, with an optimum growth temperature at 300C.
  • 11. Isolates were grown on five broth media (Asthana & Hawkers, Potato Dextrose Agar, Czapek’s Dox Agar, Corn Meal Agar and Richards Agar) for fresh, dry weight and oat meal broth culture filtrates of all isolates was used in phytotoxic effects. It recorded that maximum fresh and dry weight was observed on corn meal agar medium. The maximum reduction in radical and plumule length of germinating seeds were recorded in Haldichaur isolate.
  • 12. Morphological characterization  Isolates of R. solani were subcultured on PDA poured Petri dishes in triplicate and incubated at 25oC for 3-5 days. Mycelial and sclerotial parameters were recorded for each isolate. as virulent; 30-49%, as moderately virulent and 10-29% as least virulent.
  • 13. Rhizoctonia Damping-Off and Stem Rot of Soybeans  Rhizoctonia damage may occur at any time during the growing season, but it is more severe on young seedlings.  Rhizoctonia solani can cause seed rot, root rot, and lesions on hypocotyls. Damping-off occurs when germinating seedlings are infected prior to or just after emergence.  On hypocotyls, lesions are reddish-brown and sunken. Diseased seedlings collapse from the firm, dry canker that girdles the hypocotyl.  Diseased older plants become chlorotic, resembling plants with nitrogen deficiency.  variability in Symptoms
  • 14. Symptoms on older plants, or on those plants that survive seedling infections, include the characteristic sunken, reddish-brown cankers on the lower stem near the soil surface. Disease losses result from stand reduction in newly planted fields and premature death of diseased plants that produce undersized seed. Rhizoctonia stem rot—yellowed, stunted, infected plants in the field. Premature yellowing caused by Rhizoctonia solani, stem rot.
  • 15.  Damage caused by Rhizoctonia is frequently confused with diseases caused by other seedling pathogens. It is very difficult to identify the pathogen that causes preemergence damping-off.  The symptoms are very similar for Pythium, Phytophthora, and Rhizoctonia.  Rhizoctonia infected plants typically have characteristic and distinct reddish-brown, sunken cankers on the lower stem or hypocotyl.  Older plants with Phytophthora stem rot have chocolate brown lesions that extend up the stem several nodes on older plants. Characteristic reddish-brown sunken cankers on the hypocotyl caused by Rhizoctonia solani.
  • 16.  The most common symptom is wilting of the leaves, starting with the oldest leaves, and is likely a consequence of damage to the vascular system (Figures 1 and 3).  Leaves may or may not become yellow. In some instances, the petioles may blacken where they are attached to the crown (Figure 2).  Crown rot infection probably is initiated when infected soil is thrown into crowns during cultivation, by rain splash of infected soil into the crowns or where the petiole attachment to the crown is covered with infected soil (Figure 2). Rhizoctonia Root and Crown Rot of Sugarbeet Figure 1. Wilting of oldest leaves fi rst and yellowing of plants infected with R. solani. Figure 2. Blackening of petioles and infection at the soil level.
  • 17.  Root rot infection typically starts at or just below the soil line (Figure 3), and sometimes lower on the tap root (Figure 4).  Root symptoms may range from scattered brown to black lesions on the root surface to complete rotting of the root. Initially, the disease may occur in a few patches in a fi eld. If signifi cant inoculum is present, often as a result of continuous planting of susceptible hosts, entire sugarbeet fi elds may be lost to the disease when conditions are favorable for disease development. Figure 3. Rhizoctonia root rot-infected plant with yellow leaves showing infection starting on the root just below the soil line. Figure 4. Rhizoctonia solani-infected plant with rot symptoms on the lower part of the tap root.
  • 18.  Genetic variability of R. solani on potato Rhizoctonia disease symptoms on potato by isolating field strains from important potato growing areas. The majority of the samples were taken from areas practicing intensive potato cultivation and production of high quality seed tubers. In Rhizoctonia samples associated with potato were isolated, of which 52.7% originated from canker lesions on stems and roots . Almost as many isolates were assembled from sclerotia (42.7%) either from tubers or from roots .
  • 19. Genetic variability of Sheath blight of rice Variability in 35 isolates of Rhizoctonia solani Kuhn causing sheath blight of rice and weeds, was examined by polymerase chain reaction-random amplified polymorphic DNA (PCR - RAPD) analysis in conjunction with morphology and pathogenicity studies.  Studies on morphological characterization of R. solani isolates showed that isolates were highly variable both in mycelial and sclerotial parameters, with no consistent characters related to virulence, origin, production system or geographic origin. Pathogenicity of R. solani was also evaluated and based on their virulence, isolates were classified into different virulent groups.  The similarity values of RAPD profiles ranged from 0.37 to 0.85 with an average of 0.61 among all the isolates. The percentage polymorphism detected per primer varied from 76.9 to 100% which suggested their utility in DNA finger printing of the sheath blight isolates.
  • 20. Conclusion Rhizoctonia Solani is a multiphagous pathogen and posses a great threat to plants. It survives in soil through formation of sclerotia which are hard resting structures of the pathogen. Sclerotia formation is not formed in all diseases but present in most of the crops. It can be effectively manged using biological and chemical control measures.