Will likely be turning this into a YouTube talk at some point, but gives resources, breakdowns of parts of a scientific paper, and tips to avoid plagiarism.
First part of a workshop looking at industry case studies in natural language processing for From Theory to Practice Workshop (AIMS, Kigali, March 2022).
Study on Bibliography and Reference
Bibliography a science of the transmission of literary document
A bibliography is an orderly list of resources on a particular subject
A bibliography provides the full reference information for all the sources which you may have consulted in preparing a particular project
Referencing
Referencing is “ the process of acknowledging the sources you have used in writing your report. It allows the reader to access your source documents as quickly and easily as possible in order to verify, if necessary, the validity of your arguments and the evidence on which they are based.”
Pears, R. and Shields, G. (2020) Cite them right: the essential referencing guide.9th edn. Basingstoke: Palgrave Macmillan.
A guide to writing a professional report which can then easily be formatted for a research journal. Tips on spelling and language errors are also give. Very useful, must go through once..
First part of a workshop looking at industry case studies in natural language processing for From Theory to Practice Workshop (AIMS, Kigali, March 2022).
Study on Bibliography and Reference
Bibliography a science of the transmission of literary document
A bibliography is an orderly list of resources on a particular subject
A bibliography provides the full reference information for all the sources which you may have consulted in preparing a particular project
Referencing
Referencing is “ the process of acknowledging the sources you have used in writing your report. It allows the reader to access your source documents as quickly and easily as possible in order to verify, if necessary, the validity of your arguments and the evidence on which they are based.”
Pears, R. and Shields, G. (2020) Cite them right: the essential referencing guide.9th edn. Basingstoke: Palgrave Macmillan.
A guide to writing a professional report which can then easily be formatted for a research journal. Tips on spelling and language errors are also give. Very useful, must go through once..
Literature Review
A literature review surveys books, scholarly articles, and any other sources relevant to a particular issue, area of research, or theory, and by so doing, provides a description, summary, and critical evaluation of these works in relation to the research problem being investigated.
Types of literature review
On the purpose of research there are 5 main types of literature review:
Narrative Literature Review
Argumentative Literature Review
Theoretical Literature Review
Integrative Literature Review
Systematic Literature Review
It is a tutorial for report writing or thesis writing. This tutorial consists of the font style, pagination format, table format, figure format, reference and bibliography format for academic writing.
How to make a project report for schools, colleges, universities, researchers...Payaamvohra1
This ppt gives you an idea about frequently made project report. Do checkout my other ppt based on research proposal, review paper, internship report etc.
Composed of discussions of facts and principles to which the present study is related
They may be classified as:
Local, if the inquiry was conducted in the Philippines; and
Foreign, if conducted in foreign lands RELATED STUDIES
Importance, Purposes, and Functions of Related Literature and Studies
A survey or review of related literature and studies is very important because such reviewed literature and studies serve as a foundation of the proposed study. This is because related literature and studies guide the researcher in pursuing his research venture. Importance, Purposes, and Functions of Related Literature and Studies
Research methodology - Research Report Preparation, Bibliography & Annexure i...The Stockker
Process of Report Writing, Types of Research Reports, Precautions in preparing the Research Report, Significance of Bibliography, Suggestions & Recommendations
These slides are related to our last event at the Sapienza University of Rome for the graduate students. Please follow our website: https://www.facebook.com/psa.sapienza
Literature Review
A literature review surveys books, scholarly articles, and any other sources relevant to a particular issue, area of research, or theory, and by so doing, provides a description, summary, and critical evaluation of these works in relation to the research problem being investigated.
Types of literature review
On the purpose of research there are 5 main types of literature review:
Narrative Literature Review
Argumentative Literature Review
Theoretical Literature Review
Integrative Literature Review
Systematic Literature Review
It is a tutorial for report writing or thesis writing. This tutorial consists of the font style, pagination format, table format, figure format, reference and bibliography format for academic writing.
How to make a project report for schools, colleges, universities, researchers...Payaamvohra1
This ppt gives you an idea about frequently made project report. Do checkout my other ppt based on research proposal, review paper, internship report etc.
Composed of discussions of facts and principles to which the present study is related
They may be classified as:
Local, if the inquiry was conducted in the Philippines; and
Foreign, if conducted in foreign lands RELATED STUDIES
Importance, Purposes, and Functions of Related Literature and Studies
A survey or review of related literature and studies is very important because such reviewed literature and studies serve as a foundation of the proposed study. This is because related literature and studies guide the researcher in pursuing his research venture. Importance, Purposes, and Functions of Related Literature and Studies
Research methodology - Research Report Preparation, Bibliography & Annexure i...The Stockker
Process of Report Writing, Types of Research Reports, Precautions in preparing the Research Report, Significance of Bibliography, Suggestions & Recommendations
These slides are related to our last event at the Sapienza University of Rome for the graduate students. Please follow our website: https://www.facebook.com/psa.sapienza
II. Formatting Guidelines
Margins
All copies of a thesis or dissertation must have the following uniform margins throughout the entire document:
Left: 1″ (or 1 1/4" to ensure sufficient room for binding the work if desired)
Right: 1″
Bottom: 1″ (with allowances for page numbers; see section on Pagination)
Top: 1″
Exceptions: The first page of each chapter (including the introduction, if any) begins 2″ from the top of the page. Also, the headings on the title page, abstract, first page of the dedication/ acknowledgements/preface (if any), and first page of the table of contents begin 2″ from the top of the page.
Non-Traditional Formats
Non-traditional theses or dissertations such as whole works comprised of digital, artistic, video, or performance materials (i.e., no written text, chapters, or articles) are acceptable if approved by your committee and graduate program. A PDF document with a title page, copyright page, and abstract at minimum are required to be submitted along with any relevant supplemental files.
Font Type and Size
To ensure clear and legible text for all copies, choose a TrueType font recommended by ProQuest Dissertation Publishing. A list of recommended fonts can be found on ProQuest's sitepdf icon.
Fonts must be 10, 11, or 12 points in size. Superscripts and subscripts (e.g., formulas, or footnote or endnote numbers) should be no more than 2 points smaller than the font size used for the body of the text.
Spacing and Indentation
Space and indent your thesis or dissertation following these guidelines:
Spacing and Indentation with mesaurements described in surrounding text
The text must appear in a single column on each page and be double-spaced throughout the document. Do not arrange chapter text in multiple columns.
New paragraphs must be indicated by a consistent tab indentation throughout the entire document.
The document text must be left-justified, not centered or right-justified.
For blocked quotations, indent the entire text of the quotation consistently from the left margin.
Ensure headings are not left hanging alone on the bottom of a prior page. The text following should be moved up or the heading should be moved down. This is something to check near the end of formatting, as other adjustments to text and spacing may change where headings appear on the page.
Exceptions: Blocked quotations, notes, captions, legends, and long headings must be single-spaced throughout the document and double-spaced between items.
Pagination
Paginate your thesis or dissertation following these guidelines:
Use lower case Roman numerals (ii, iii, iv, etc.) on all pages preceding the first page of chapter one. The title page counts as page i, but the number does not appear. Therefore, the first page showing a number will be the copyright page with ii at the bottom.
Arabic numerals (beginning with 1, 2, 3, 4, etc.) start at chapter one or the introduction, if applicable. Arabic numbers must be included on all pages of the text, illustr
How to write a research paper for an international peerreviewed journalvijay kumar
This PowerPoint is on writing a research article for an International Peer-reviewed Journal. The talk was delivered at an International Virtual workshop. All videos related to research conferences can be viewed at
https://www.youtube.com/channel/UCNEUKBUIaQG3wr05Sj38oDA/featured
Writing the winning thesis or dissertation, a step by step guide. Slides have been prepared from the book of the same name authored by Randy L. Joyner, William A. Rouse and Allan A. Glatthorn.
A slide show about questions and issues that a writer needs to take into account when writing the text that accompanies papers. The show is designed for PhD students that are undertaking a PhD by publication.
Generative AI for Social Good at Open Data Science East 2024Colleen Farrelly
A brief overview of generative AI technologies and their use for social good initiatives, including cultural training, medical image generation, drug design, and public health.
PyData Global 2023 talk overviewing case studies in network science, including stock market crash prediction, food price pattern mining, and stopping the spread of epidemics.
Overview of mathematical and machine learning models related to climate risk modeling, climate change simulations, and change point detection. Includes a hands-on session with geometry-based systems analysis of food prices related to climate change and geopolitical factors.
WiDS Workshop on natural language processing and generative AI. Details common methods that tie into coding examples. Ends with ethics discussion regarding these technologies and potential for misuse.
Link to talk YouTube: https://www.youtube.com/watch?v=byGzKm0H1-8&list=PLHAk3jHXWpxI7fHw8m5PhrpSRpR3NIjQo&index=3
ODSC-East 2023 presentation covering topics related to my book, The Shape of Data, including how geometry plays a role in text/image embeddings, network science problems, survey data analytics, image analytics, and epidemic wrangling.
This talk overviews my background as a female data scientist, introduces many types of generative AI, discusses potential use cases, highlights the need for representation in generative AI, and showcases a few tools that currently exist.
Emerging Technologies for Public Health in Remote Locations.pptxColleen Farrelly
The tools possible to leverage for public health interventions has changed significantly in the past decades. Tools from geometry, natural language processing, and generative AI allow for a quick design and implementation of interventions, even in very rural parts of the world. Case studies involve HIV, Ebola, and COVID interventions.
WoComToQC workshop lecture on Forman-Ricci curvature for applications in industry (social networks, disaster logistics, spatial data, and spatiotemporal goods pricing data).
PyData Global talk covering tools from geometry/topology and their uses in public health, public policy, and social good initiatives. Examples include food price prediction, COVID policies, public health interventions, and fair AI.
Data Science Dojo Talk on comparing time series using persistent homology. Short overview of time series data. A bit of topology. Code available. Example includes stock exchange data.
Statistical and topological algorithm piece of an Applied Machine Learning Days Morocco talk. Covers ARIMA models, SSA models, GEE models, and persistent homology. Applications include pricing data, stock data, development data, and healthcare data. Datasets and full presentation can be found on GitHub: https://github.com/gabayae/Time-Series-Applications_AMLD2022
An introduction to quantum machine learning.pptxColleen Farrelly
Very basic introduction to quantum computing given at Indaba Malawi 2022. Overviews some basic hardware in classical and quantum computing, as well as a few quantum machine learning algorithms in use today. Resources for self-study provided.
Indaba Malawi workshop on basic approaches to time series data, including ARIMA models and SSA models. Example in R includes an agricultural example from historical Malawi data with Rssa package and base ARIMA models.
NLP: Challenges and Opportunities in Underserved AreasColleen Farrelly
This talk highlights the challenges and opportunities that exist in linguistically underserved areas. It highlights NLP initiatives in Sub-Saharan Africa, as well as financial opportunities in technology if areas neglected linguistically can produce tools in their local languages. Ethics, ownership, and other concerns are highlighted to guide development initiatives.
Geometry, Data, and One Path Into Data Science.pptxColleen Farrelly
Women in Data Science (Alexandria, Egypt) keynote address. Topics cover my journey into data science/machine learning, an overview of data science as a profession, and some case studies on topology/geometry in analytics. Example case studies include insurance, natural language processing, social network analysis, and psychometrics.
WiDS Alexandria, Egypt workshop in topological data analysis (Python and R code available on request), covering persistent homology, the Mapper algorithm, and discrete Ricci curvature. Examples include text data and social network data.
SAS Global 2021 Introduction to Natural Language Processing Colleen Farrelly
Overview of text data, processing of text data, integration of text data with structured databases, and uses of text data in analytics across a variety of fields. Here's the talk link: https://www.youtube.com/watch?v=wS0X1bSsuUU
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
2. Meet Your Instructor
• Data scientist with multiple publications during graduate school and as
an industry researcher
– Peer-reviewed publications in statistics, psychology, medicine, and computing
– Many college term papers in the humanities
• Course geared towards
– College students who need help writing a scientific paper
– Graduate students who are writing for peer-review the first time
– Researchers in industry who are hoping to publish in a conference journal
4. Finding a Journal, Part 1
• Important considerations
– Subject matter (organic chemistry vs. physical chemistry)
– Journal scope (only immigrant population health, only experimental papers…)
– Impact factor (high, low, somewhere in between)
– Time-to-decision (1-week turn-around vs. 3-month turn-around)
– Time-to-publication (important when competitors exist)
– Pre-print regulations (arXiv as publication?)
5. Finding a Journal, Part 2
• How to find journals
– Elsevier journal insights/journal finder tools (https://journalfinder.elsevier.com/)
– Field experts (collaborators, mentors…)
6. Finding a Journal, Part 3
• Pre-prints (arXiv and related websites)
– Feedback
– Credit for work
7. Plagiarism
• Global (passing off someone else’s whole paper as yours)
• Paraphrasing (using idea without citation)
• Verbatim (copying lines of text without citation)
• Mosaic (combining sources without citations)
• Self (re-using your own work in another work)
• Incorrect (misapplying someone else’s work/conclusions)
• More here: https://www.scribbr.com/plagiarism/types-of-plagiarism/
8. Writing Resources
• Many resources for students and university researchers whose native
language is not English
– University writing centers
– Freelance writers to help with grammar/spelling/structure
– Prior papers in a journal as a style guide
– Online citation services and tutorials
9. Anatomy of a Scientific Paper
• Title
• Abstract
• Introduction
• Methods
• Results
• Conclusions
• References
10. Title and Abstract
• Descriptive title
• Abstract
– Summary of your paper
– Limits on number of words
– Varies in structure by journal
11. Introduction
• Overview of problem
– Relevant prior research
– Gaps that exist in knowledge/populations…
– Positioning paper within that gap
– Relevant hypotheses/proof structure
• Should be complete but as short as possible (not a full field literature
review)
12. Methods
• Data collection
• Data description
• Techniques to analyze data/critically examine the
problem/mathematical proofs…
• Include relevant software with proper citation
13. Results
• Usually separate from methods but may be combined in some journals
• Includes:
– Results of methods
– Graphs
– Tables
– Statistical details
– Other visualizations or metrics
14. Conclusions
• Short section noting:
– Relevance of results
– Limitations of the study
– Future directions given results
15. References
• List of all previous research
• Conforms to journal’s required citation style
– APA
– MLA
• Tools to help with citation style
– Google Scholar
– Endnote
– BibTeX
– RefWorks