DESIGNING
ORGANIC
SYNTHESIS
Content
Retro synthesis of:
• Acyclicsaturated systems
• Acyclicunsaturated systems
• Monocyclic compound
• Bicycliccompound
• Aromatic compounds
Retrosynthetic analysis is a problem-solving technique for transforming
the structure of a synthetic target (TGT) molecule to a sequence of
progressively simpler structures along a pathway which ultimately
leads to simple or commercially available starting materials for a
chemicalsynthesis.
Criteria for a good disconnection
• A good mechanism
• Greatest simplification
• Recognisable starting material
Disconnection of alcohols
Analysis
Synthesis
Cyanide is agood anionand cation is stabilised by the lone pair of electron on
oxygen
The acetelyne anion is the most stable anion
Analysis
Synthesis
Ph OH
Me CH
The reactions mentioned in previous slides doesn’t gives us stable anion
Et-Synthon
synthetic equivalent of Et– the grignard reagent (Et-MgBr) or the alkyllithium(Et-
Li).
Analysis
Synthesis
Route a) gives another target to be made
Route b) gives to equal simplified pieces – acetone and cyclohexyl bromide
Disconnection of tertiary alcohol with two group same
Analysis
Removing both the group at single disconnection getting anester and two
grignard’s reagents
Synthesis
Double bond in six membered ring with an electron withdrawing group, we use
diels-alder disconnection
Analysis
Disconnection of an alcohol with one group as a
hydrogen
Synthon - H-
Synthetic equivalents -sodium borohydride and lithium aluminiumhydride
The disconnection involving H- does not alter thecarbon skeleton;they
are not disconnections but functionalgroup interconversion (FGI).
Analysis
Sodium boromohydride onlyreduces the aldehyde and lithium aluminium
hydride reduces almost allcarbonyl compounds neither reagents reduces the
double bond
Analysis
One or both the hydrogen can be removed and either starting materialscan be
made by diels-alder reactions.
Synthesis
Synthesis of most compounds is often best by first going back to alcohols by a
straightforward FGI and disconnections
List of compounds you can make alcohols from FGI.
Analysis
Synthesis
Disconnection of halide
Reagentfor Synthon A is an epoxide. Works wellwithmono-substituted
epoxides
Analysis
Synthesis
It is a poor tactic to chop off carbon at once, also this route gives us only 40% yeild
asthe benzyl grignard reagents easily gives radicalsand polymerises.
Disconnection of alkenes
Designing an alkenesynthesis is to add water across the double bond thus on
dehydration A willgive cyclohexanone but B willgive another Alkene
Analysis
Analysis
Synthesis
Dehydration of A gives C (another alkene)but dehydration of B gives
only thetarget molecule and notless substitutedD
Alternate route for disconnection of olefins is from the double bond. Corresponds
to wittig reactions
Analysis
The halide in route B is easilyrecognisable and the aldehyde can be
synthesised usingthe diels-alder reaction
The route A can also be used butthe startingmaterials are not so readily
available.
Analysis
Synthesis
Disconnection of ketones
Disconnectionof bond joining aromatic ring and aliphaticrind is carried
out by friedel-crafts reaction usingacetyl chloride and aluminium
chloride
Analysis
Routea is better as it will give us an acyl rather thanalkyl halideand an
activated benzenering
Analysis
Routeb disconnection is notpossible as nitro group is metadirecting
and also a nitrobenzene will not react under friedel-crafts
Routea is fine as MeO is ortho-directing.
Analysis
Analysis
Disconnections of acids
An acid is an hydroxyl compound and hence canbe disconnected as alcohols
Analysis
Acid derivatives are made directly from acids or conversion of other acid
derivatives depending on their stability.
Analysis
Synthesis
Disconnection of saturated
hydrocarbons
Compounds with no functional groups are made by hydrogenation of a double
bond
Analysis
Synthesis
Analysis
Synthesis
Controlling disconnections
Protection and activation
The grignard reagent might attack ketone giving wrong product
To avoidthis, protect the ketone by reversible FGI. A common method is to make a
cyclicketal
Any functional group can be a protecting group providing
•It can be added easily
•It can be easily removed
•It should not react with the reagent
This reactions gives a poor yield
The product is as reactive asthe starting material and further reaction occurs
So we activateone position of carbonyl group by adding CO2Et group using ester
Now removing the activated group just asthe protecting group. Here, by
hydrolysis anddecarboxylation.
Analysis
Synthesis
Analysis
Synthesis
Application of disconnections
In 1936, robinson carried out thisreaction to get thealcohol A
He got an alcohol B
Even with modern spectroscopic method the quickest way to identify a compound
is to synthesise and compare the N.M.R, Fingerprint and I.R. region.
Analysis
Synthesis
References
• Stuart Warren.Organicsynthesis:thedisconnectionapproach. Wiley
India Pvt. Ltd, Publishers.
• Stuart Warren. Designing organicsyntheses:Aprogrammed
introductiontothesynthonapproach. Wiley India Pvt. Ltd, Publishers.
• E. J. Corey. Thelogicofchemicalsynthesis.Jon Wiley and Sons,
Publishers
"Long multistep syntheses
of 20 or more steps could
be undertaken with
confidence despite
the Damocles sword of
synthesis - only one step
need fail for the entire
project to meet sudden
death.“
- E. J. Corey. The logic of
chemical synthesis. Jon
Wiley and Sons, Publishers

Retrosynthesis

  • 1.
  • 2.
    Content Retro synthesis of: •Acyclicsaturated systems • Acyclicunsaturated systems • Monocyclic compound • Bicycliccompound • Aromatic compounds
  • 3.
    Retrosynthetic analysis isa problem-solving technique for transforming the structure of a synthetic target (TGT) molecule to a sequence of progressively simpler structures along a pathway which ultimately leads to simple or commercially available starting materials for a chemicalsynthesis.
  • 4.
    Criteria for agood disconnection • A good mechanism • Greatest simplification • Recognisable starting material
  • 5.
  • 6.
    Analysis Synthesis Cyanide is agoodanionand cation is stabilised by the lone pair of electron on oxygen
  • 7.
    The acetelyne anionis the most stable anion Analysis Synthesis Ph OH Me CH
  • 8.
    The reactions mentionedin previous slides doesn’t gives us stable anion Et-Synthon synthetic equivalent of Et– the grignard reagent (Et-MgBr) or the alkyllithium(Et- Li). Analysis Synthesis
  • 9.
    Route a) givesanother target to be made Route b) gives to equal simplified pieces – acetone and cyclohexyl bromide
  • 10.
    Disconnection of tertiaryalcohol with two group same Analysis Removing both the group at single disconnection getting anester and two grignard’s reagents Synthesis
  • 11.
    Double bond insix membered ring with an electron withdrawing group, we use diels-alder disconnection Analysis
  • 12.
    Disconnection of analcohol with one group as a hydrogen Synthon - H- Synthetic equivalents -sodium borohydride and lithium aluminiumhydride The disconnection involving H- does not alter thecarbon skeleton;they are not disconnections but functionalgroup interconversion (FGI). Analysis
  • 13.
    Sodium boromohydride onlyreducesthe aldehyde and lithium aluminium hydride reduces almost allcarbonyl compounds neither reagents reduces the double bond Analysis One or both the hydrogen can be removed and either starting materialscan be made by diels-alder reactions. Synthesis
  • 14.
    Synthesis of mostcompounds is often best by first going back to alcohols by a straightforward FGI and disconnections List of compounds you can make alcohols from FGI.
  • 16.
  • 17.
  • 18.
    Reagentfor Synthon Ais an epoxide. Works wellwithmono-substituted epoxides Analysis Synthesis It is a poor tactic to chop off carbon at once, also this route gives us only 40% yeild asthe benzyl grignard reagents easily gives radicalsand polymerises.
  • 19.
  • 20.
    Designing an alkenesynthesisis to add water across the double bond thus on dehydration A willgive cyclohexanone but B willgive another Alkene Analysis
  • 21.
    Analysis Synthesis Dehydration of Agives C (another alkene)but dehydration of B gives only thetarget molecule and notless substitutedD
  • 22.
    Alternate route fordisconnection of olefins is from the double bond. Corresponds to wittig reactions Analysis
  • 23.
    The halide inroute B is easilyrecognisable and the aldehyde can be synthesised usingthe diels-alder reaction The route A can also be used butthe startingmaterials are not so readily available. Analysis Synthesis
  • 24.
  • 25.
    Disconnectionof bond joiningaromatic ring and aliphaticrind is carried out by friedel-crafts reaction usingacetyl chloride and aluminium chloride Analysis
  • 26.
    Routea is betteras it will give us an acyl rather thanalkyl halideand an activated benzenering Analysis
  • 27.
    Routeb disconnection isnotpossible as nitro group is metadirecting and also a nitrobenzene will not react under friedel-crafts Routea is fine as MeO is ortho-directing. Analysis
  • 28.
  • 29.
  • 30.
    An acid isan hydroxyl compound and hence canbe disconnected as alcohols Analysis Acid derivatives are made directly from acids or conversion of other acid derivatives depending on their stability.
  • 31.
  • 32.
  • 33.
    Compounds with nofunctional groups are made by hydrogenation of a double bond
  • 34.
  • 35.
  • 36.
  • 37.
    The grignard reagentmight attack ketone giving wrong product To avoidthis, protect the ketone by reversible FGI. A common method is to make a cyclicketal Any functional group can be a protecting group providing •It can be added easily •It can be easily removed •It should not react with the reagent
  • 38.
    This reactions givesa poor yield The product is as reactive asthe starting material and further reaction occurs
  • 39.
    So we activateoneposition of carbonyl group by adding CO2Et group using ester Now removing the activated group just asthe protecting group. Here, by hydrolysis anddecarboxylation.
  • 40.
  • 41.
  • 42.
    Application of disconnections In1936, robinson carried out thisreaction to get thealcohol A He got an alcohol B Even with modern spectroscopic method the quickest way to identify a compound is to synthesise and compare the N.M.R, Fingerprint and I.R. region. Analysis Synthesis
  • 43.
    References • Stuart Warren.Organicsynthesis:thedisconnectionapproach.Wiley India Pvt. Ltd, Publishers. • Stuart Warren. Designing organicsyntheses:Aprogrammed introductiontothesynthonapproach. Wiley India Pvt. Ltd, Publishers. • E. J. Corey. Thelogicofchemicalsynthesis.Jon Wiley and Sons, Publishers
  • 44.
    "Long multistep syntheses of20 or more steps could be undertaken with confidence despite the Damocles sword of synthesis - only one step need fail for the entire project to meet sudden death.“ - E. J. Corey. The logic of chemical synthesis. Jon Wiley and Sons, Publishers