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The Public Library of Science (PLoS)  Why it is a Model to be Emulated Philip E. Bourne University of California San Diego [email_address] www.sdsc.edu/pb
My Two Lectures ,[object Object],[object Object]
The promise  - Open Access, Open Science with particular reference to PLoS ,[object Object],[object Object],[object Object],[object Object],[object Object]
My Perspective ,[object Object],[object Object],[object Object],[object Object]
Scholarly Communication Group ,[object Object],[object Object]
What is Open Access? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Why is Open Access Important? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
The journals crisis Journal  prices CPI/inflation Journals purchased Source: Association of Research Libraries
Examples of International Support for Open Access ,[object Object],[object Object],[object Object],[object Object],[object Object]
Sources of Funding Publishing is the final step in a research project Researcher Publisher Reader £ Public Digital Library Gov Funders Charity Business Institutions £
The Human Face of Open Access
Josh Sommer – A Remarkable Young Man Co-founder & Executive Director the Chordoma Foundation http://sagecongress.org/Presentations/Sommer.pdf
Chordoma ,[object Object],[object Object],[object Object],http://upload.wikimedia.org/wikipedia/commons/2/2b/Chordoma.JPG
http://sagecongress.org/Presentations/Sommer.pdf
http://sagecongress.org/Presentations/Sommer.pdf
http://sagecongress.org/Presentations/Sommer.pdf
Adapted: http://sagecongress.org/Presentations/Sommer.pdf Isaac If I have seen further it is only by  standing on the shoulders of giants Isaac Newton From Josh’s point of view the climb  up just takes too long > 15 years and > $850M to be  more precise
http://sagecongress.org/Presentations/Sommer.pdf
http://sagecongress.org/Presentations/Sommer.pdf
http://fora.tv/2010/04/23/Sage_Commons_Josh_Sommer_Chordoma_Foundation
Committed to making the world ’ s scientific and medical literature  a public resource
PLoS Represents the Purest Form of Open Science – CC-BY
Some PLoS History…
PLoS Founding Board of Directors Harold Varmus PLoS Co-founder  Nobel Laureate, Director NCI  Patrick O. Brown PLoS Co-founder Howard Hughes Medical Institute  & Stanford University School of Medicine Michael B. Eisen PLoS Co-founder Lawrence Berkeley National Laboratory  & University of California at Berkeley
What is the Public Library of Science? ,[object Object],[object Object],[object Object],A nonprofit organization of scientists committed to making the world ’ s scientific and medical literature a public resource
PLoS – A Brief History ,[object Object],[object Object],[object Object],[object Object],[object Object]
PLoS Biology October, 2003 PLoS Medicine October, 2004 PLoS Community Journals June-September, 2005 & October, 2007 (NTDs) PLoS ONE December, 2006 “ a very large compendium of papers that have been vetted for scientific quality, but which will not be confined in terms of their likely importance."    Harold Varmus, Oct 2005 on PLoS ONE IF ~12 $$$ IF 5-10 $$ IF ~4  $
PLoS ONE is the first so-called “ mega journal ”
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Some of the Features of PLoS ONE
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],The  ‘ full ’  PLoS ONE Model
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Quality Output
 
What is PLoS Doing With Its Open Access Content? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
 
Article Level Metrics
The PLoS/PMC Corpus – Under the Hood ,[object Object],[object Object],[object Object]
What is PLoS Computational Biology Doing Specifically? ,[object Object],[object Object],[object Object],[object Object]
The Wikipedia Experiment – Topic Pages ,[object Object],[object Object],[object Object],[object Object],[object Object]
PLoS Comp Biol Software ,[object Object],[object Object],[object Object],Motivation: S.Veretnik, J.L.Fink, and P.E. Bourne 2008  Computational Biology Resources Lack Persistence and Usability.  PLoS Comp. Biol.  . 4(7): e1000136
PLoS Comp Biol Software Guess What We Don’ t Have Many Papers So Far!
PLoS Comp Biol – Lessons Learned ,[object Object],[object Object],[object Object],[object Object]
What About the Future?
[object Object],uzar.wordpress.com  The Future – Requires a different kind of publisher than we have today
My Wish… ,[object Object],What I want from a Publisher of the Future PLoS Comp Biol 2010  6(5): e1000787 UKSG 2011
What Does That Mean?  The “Publisher” becomes Part of the Scientific Workflow Scientist Idea Experiment Data Conclusions Publish Laboratory Publisher Maybe The Line is Somewhere Else? UKSG 2011 uzar.wordpress.com
Maybe The Line is Somewhere Else? Scientist Idea Experiment Data Conclusions Publish Laboratory Publisher Institution? Lab Notebook UKSG 2011 ?
Maybe The Line is Somewhere Else? Scientist Idea Experiment Data Conclusions Publish Laboratory Publisher Institution? Lab Notebook UKSG 2011 ?
If All This is Realized What Could the Future Hold? ,[object Object],[object Object]
Questions? [email_address]

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PLoS - Why It is a Model to be Emulated

Editor's Notes

  1. Specifically, our aim is to achieve open access to the literature, whereby journal articles are freely available immediately upon publication their use is unrestricted, so that readers can download, print off, reanalyse, extract data and so on authors retain the copyright, and specifically the right to be appropriately cited papers are also deposited separately from the publisher in a public online archive (PMC)
  2. This illustrates one aspect of the frustration with the existing system From 1986- 2002 journals increased in price over 200%, and library purchasing has been struggling just to maintain the status quo. Commercially STM pubishing is a huge success story. But many commentators have now asserted that this commercial success has been achieved at the expense of the scientific community, and only those in rich institutions can afford access. And that this position is unsustainable - we are heading for a meltdown.
  3. In my penulimate slide I ’d just like to emphasize that the RCUK proposal resonates with many other related initiatives that are supporting open access internationally. In Europe there is the Berlin Declaration, which has been signed by major funders such as the DFG in Germany, INSERM, CNRS in France. Amongst other things the signatories support the kind of licensing that I mentioned in the previous slide. Redistribution for any purpose subject only to the condition of proper attribution The NIH has a proposal to increase access to the literature, and has invested a great deal in the establishment of PubMed Central, which provides powerful full text searching across published literature, and is committed to long term archiving, interoperability with other repositories, and public access. We strongly encourage the initiative to develop a similar full text archive in collaboration with the BL. Finally, more broadly still the UN ’s World Summit on the Information Society strongly endorses open access publishing.
  4. As you know, the way in which OA journals are financed is by a publication fee, paid for by the same organizations that currently fund subscription journals. As stated in the RCUK draft policy, the costs of communication and dissemination are an integral part of the costs of research itself the challenge is to reroute the funds that currently support publishing towards researchers, so that they are able to pay publication fees.
  5. Harold Varmus, Pat Brown and Mike Eisen established the Public Library of Science, initially as a sort of pressure group whose aim was to force publishers to change their ways.
  6. Initially, they circulated an open letter urging publishers to deposit research literature in freely accessible databases, 6 months after publication. In many people ’s eyes this was seen as a naïve proposal, but it generated massive support in the community. The upshot was that some publishers did alter their policies - notably the society and non profit publishers - but the vast bulk of the literature remained accessible only to subscribers. The reason was simply that researchers had nowhere else to go with their papers - but the level of support indicated that it was the right time to launch journals based on a new business model - open access. And in December last year, Harold, Pat and Mike secured funding from the Moore foundation to the tune of 9 million dollars.