Automation in microbiology, changing concept and defeating challengesAyman Allam
A presentation about the automation in microbiology presented in 24th conference of the Egyptian Society of Medical Microbiology and immunology, 4/2017.
Infection Control Guidelines for Prevention of Catheter Associated Urinary Tract Infection
Dr. NAHLA ABDEL KADERوMD, PhD.
INFECTION CONTROL CONSULTANT, MOH
INFECTION CONTROL CBAHI SURVEYOR
Infection Control Director, KKH.
Antibiotic policy and trends in antibiotic policy,
References
Infection control: Basic concepts and practices, 2nd edn.
www.cdc.org
Antibiotics guide: choices for common infections
Chennai Declaration
Automation in microbiology, changing concept and defeating challengesAyman Allam
A presentation about the automation in microbiology presented in 24th conference of the Egyptian Society of Medical Microbiology and immunology, 4/2017.
Infection Control Guidelines for Prevention of Catheter Associated Urinary Tract Infection
Dr. NAHLA ABDEL KADERوMD, PhD.
INFECTION CONTROL CONSULTANT, MOH
INFECTION CONTROL CBAHI SURVEYOR
Infection Control Director, KKH.
Antibiotic policy and trends in antibiotic policy,
References
Infection control: Basic concepts and practices, 2nd edn.
www.cdc.org
Antibiotics guide: choices for common infections
Chennai Declaration
INFECTION CONTROL TRENDS newsletter
Volume 1 | Issue 2 | January 2019 Circulation: Quarterly | All-India | e-Copy format
ACCREDITATION & QUALITY IN INFECTION CONTROL
CHIEF EDITOR Dr. Ranga Reddy
EDITOR Dr. T V Rao
EDITOR & CONCEPT Dr. Dhruv Mamtora
TEAM MEMBER Sister Solbymol
ACCREDITATION & QUALITY IN INFECTION CONTROL
HEALTH IS THE SINGLE MOST IMPORTANT ISSUE IN THE HUMAN RACE TODAY.TB IS A MAJOR PROBLEM FACING MANKIND AND SO THIS NEW W.H.O TEST IS A MAJOR BOOST TOWARDS THE FIGHT AGAINST TB
INFECTION CONTROL TRENDS newsletter
Volume 1 | Issue 2 | January 2019 Circulation: Quarterly | All-India | e-Copy format
ACCREDITATION & QUALITY IN INFECTION CONTROL
CHIEF EDITOR Dr. Ranga Reddy
EDITOR Dr. T V Rao
EDITOR & CONCEPT Dr. Dhruv Mamtora
TEAM MEMBER Sister Solbymol
ACCREDITATION & QUALITY IN INFECTION CONTROL
HEALTH IS THE SINGLE MOST IMPORTANT ISSUE IN THE HUMAN RACE TODAY.TB IS A MAJOR PROBLEM FACING MANKIND AND SO THIS NEW W.H.O TEST IS A MAJOR BOOST TOWARDS THE FIGHT AGAINST TB
AMH JOURNALS UK Publishes STERILIZATION OF OPERATING THEATRES by Dr.T.V.Rao MD
Methods to replace fumigation By Dr.T.V.Rao MD is a Professor and Head of the Department of Microbiology at Travancore Medical College in Kollam, India
Dr T V Rao is also a content provider on Medical Microbiology and Infectious Diseases for numerous international websites.
Translated into 91 global languages for benefit many in the remote corners in the Developing countries
Dr.T.V.Rao MD
Conventional and hazardous air sterilization techniques like fumigation and ozonators are inefficient in handling sterility of air, which is the most important aspect. Most of the cross-infection occur through air as all microorganisms travel through air borne particles. Fumigation technique has a very momentary effect as far as sterilization of air is concerned.
Prevention of Surgical Site Infection- SSI [compatibility mode]drnahla
Infection Control Guidelines for Prevention of Surgical Site Infection- SSI
Dr. NAHLA ABDEL KADERوMD, PhD.
INFECTION CONTROL CONSULTANT, MOH
INFECTION CONTROL CBAHI SURVEYOR
Infection Control Director, KKH.
Biosafety is the precautionary measure that reduce laboratory risk to exposure of microbe . This power point by Lamria Agnes Meilani base on WHO standard .
White paper 2020: G-CON's Transmissible Disease Defense UnitsBrittany Berryman
This white paper discusses the use of flexible, mobile biocontainment and test units to prevent the spread of transmissible diseases. Transmissible diseases are no longer scarce and geographically limited to a location, but are becoming a more frequent occurrence, spreading rapidly due to rising populations and modern travel capability. Additionally, infectious diseases are now thriving in regions previously unsuitable for spread due to unfavorable climate and environmental conditions. Both types of diseases, therefore, have become a real threat for the entire global population.
Ethanol (CH3CH2OH), or beverage alcohol, is a two-carbon alcohol
that is rapidly distributed in the body and brain. Ethanol alters many
neurochemical systems and has rewarding and addictive properties. It
is the oldest recreational drug and likely contributes to more morbidity,
mortality, and public health costs than all illicit drugs combined. The
5th edition of the Diagnostic and Statistical Manual of Mental Disorders
(DSM-5) integrates alcohol abuse and alcohol dependence into a single
disorder called alcohol use disorder (AUD), with mild, moderate,
and severe subclassifications (American Psychiatric Association, 2013).
In the DSM-5, all types of substance abuse and dependence have been
combined into a single substance use disorder (SUD) on a continuum
from mild to severe. A diagnosis of AUD requires that at least two of
the 11 DSM-5 behaviors be present within a 12-month period (mild
AUD: 2–3 criteria; moderate AUD: 4–5 criteria; severe AUD: 6–11 criteria).
The four main behavioral effects of AUD are impaired control over
drinking, negative social consequences, risky use, and altered physiological
effects (tolerance, withdrawal). This chapter presents an overview
of the prevalence and harmful consequences of AUD in the U.S.,
the systemic nature of the disease, neurocircuitry and stages of AUD,
comorbidities, fetal alcohol spectrum disorders, genetic risk factors, and
pharmacotherapies for AUD.
- Video recording of this lecture in English language: https://youtu.be/lK81BzxMqdo
- Video recording of this lecture in Arabic language: https://youtu.be/Ve4P0COk9OI
- Link to download the book free: https://nephrotube.blogspot.com/p/nephrotube-nephrology-books.html
- Link to NephroTube website: www.NephroTube.com
- Link to NephroTube social media accounts: https://nephrotube.blogspot.com/p/join-nephrotube-on-social-media.html
Flu Vaccine Alert in Bangalore Karnatakaaddon Scans
As flu season approaches, health officials in Bangalore, Karnataka, are urging residents to get their flu vaccinations. The seasonal flu, while common, can lead to severe health complications, particularly for vulnerable populations such as young children, the elderly, and those with underlying health conditions.
Dr. Vidisha Kumari, a leading epidemiologist in Bangalore, emphasizes the importance of getting vaccinated. "The flu vaccine is our best defense against the influenza virus. It not only protects individuals but also helps prevent the spread of the virus in our communities," he says.
This year, the flu season is expected to coincide with a potential increase in other respiratory illnesses. The Karnataka Health Department has launched an awareness campaign highlighting the significance of flu vaccinations. They have set up multiple vaccination centers across Bangalore, making it convenient for residents to receive their shots.
To encourage widespread vaccination, the government is also collaborating with local schools, workplaces, and community centers to facilitate vaccination drives. Special attention is being given to ensuring that the vaccine is accessible to all, including marginalized communities who may have limited access to healthcare.
Residents are reminded that the flu vaccine is safe and effective. Common side effects are mild and may include soreness at the injection site, mild fever, or muscle aches. These side effects are generally short-lived and far less severe than the flu itself.
Healthcare providers are also stressing the importance of continuing COVID-19 precautions. Wearing masks, practicing good hand hygiene, and maintaining social distancing are still crucial, especially in crowded places.
Protect yourself and your loved ones by getting vaccinated. Together, we can help keep Bangalore healthy and safe this flu season. For more information on vaccination centers and schedules, residents can visit the Karnataka Health Department’s official website or follow their social media pages.
Stay informed, stay safe, and get your flu shot today!
Explore natural remedies for syphilis treatment in Singapore. Discover alternative therapies, herbal remedies, and lifestyle changes that may complement conventional treatments. Learn about holistic approaches to managing syphilis symptoms and supporting overall health.
Prix Galien International 2024 Forum ProgramLevi Shapiro
June 20, 2024, Prix Galien International and Jerusalem Ethics Forum in ROME. Detailed agenda including panels:
- ADVANCES IN CARDIOLOGY: A NEW PARADIGM IS COMING
- WOMEN’S HEALTH: FERTILITY PRESERVATION
- WHAT’S NEW IN THE TREATMENT OF INFECTIOUS,
ONCOLOGICAL AND INFLAMMATORY SKIN DISEASES?
- ARTIFICIAL INTELLIGENCE AND ETHICS
- GENE THERAPY
- BEYOND BORDERS: GLOBAL INITIATIVES FOR DEMOCRATIZING LIFE SCIENCE TECHNOLOGIES AND PROMOTING ACCESS TO HEALTHCARE
- ETHICAL CHALLENGES IN LIFE SCIENCES
- Prix Galien International Awards Ceremony
Lung Cancer: Artificial Intelligence, Synergetics, Complex System Analysis, S...Oleg Kshivets
RESULTS: Overall life span (LS) was 2252.1±1742.5 days and cumulative 5-year survival (5YS) reached 73.2%, 10 years – 64.8%, 20 years – 42.5%. 513 LCP lived more than 5 years (LS=3124.6±1525.6 days), 148 LCP – more than 10 years (LS=5054.4±1504.1 days).199 LCP died because of LC (LS=562.7±374.5 days). 5YS of LCP after bi/lobectomies was significantly superior in comparison with LCP after pneumonectomies (78.1% vs.63.7%, P=0.00001 by log-rank test). AT significantly improved 5YS (66.3% vs. 34.8%) (P=0.00000 by log-rank test) only for LCP with N1-2. Cox modeling displayed that 5YS of LCP significantly depended on: phase transition (PT) early-invasive LC in terms of synergetics, PT N0—N12, cell ratio factors (ratio between cancer cells- CC and blood cells subpopulations), G1-3, histology, glucose, AT, blood cell circuit, prothrombin index, heparin tolerance, recalcification time (P=0.000-0.038). Neural networks, genetic algorithm selection and bootstrap simulation revealed relationships between 5YS and PT early-invasive LC (rank=1), PT N0—N12 (rank=2), thrombocytes/CC (3), erythrocytes/CC (4), eosinophils/CC (5), healthy cells/CC (6), lymphocytes/CC (7), segmented neutrophils/CC (8), stick neutrophils/CC (9), monocytes/CC (10); leucocytes/CC (11). Correct prediction of 5YS was 100% by neural networks computing (area under ROC curve=1.0; error=0.0).
CONCLUSIONS: 5YS of LCP after radical procedures significantly depended on: 1) PT early-invasive cancer; 2) PT N0--N12; 3) cell ratio factors; 4) blood cell circuit; 5) biochemical factors; 6) hemostasis system; 7) AT; 8) LC characteristics; 9) LC cell dynamics; 10) surgery type: lobectomy/pneumonectomy; 11) anthropometric data. Optimal diagnosis and treatment strategies for LC are: 1) screening and early detection of LC; 2) availability of experienced thoracic surgeons because of complexity of radical procedures; 3) aggressive en block surgery and adequate lymph node dissection for completeness; 4) precise prediction; 5) adjuvant chemoimmunoradiotherapy for LCP with unfavorable prognosis.
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These lecture slides, by Dr Sidra Arshad, offer a quick overview of physiological basis of a normal electrocardiogram.
Learning objectives:
1. Define an electrocardiogram (ECG) and electrocardiography
2. Describe how dipoles generated by the heart produce the waveforms of the ECG
3. Describe the components of a normal electrocardiogram of a typical bipolar leads (limb II)
4. Differentiate between intervals and segments
5. Enlist some common indications for obtaining an ECG
Study Resources:
1. Chapter 11, Guyton and Hall Textbook of Medical Physiology, 14th edition
2. Chapter 9, Human Physiology - From Cells to Systems, Lauralee Sherwood, 9th edition
3. Chapter 29, Ganong’s Review of Medical Physiology, 26th edition
4. Electrocardiogram, StatPearls - https://www.ncbi.nlm.nih.gov/books/NBK549803/
5. ECG in Medical Practice by ABM Abdullah, 4th edition
6. ECG Basics, http://www.nataliescasebook.com/tag/e-c-g-basics
Couples presenting to the infertility clinic- Do they really have infertility...Sujoy Dasgupta
Dr Sujoy Dasgupta presented the study on "Couples presenting to the infertility clinic- Do they really have infertility? – The unexplored stories of non-consummation" in the 13th Congress of the Asia Pacific Initiative on Reproduction (ASPIRE 2024) at Manila on 24 May, 2024.
Anti ulcer drugs and their Advance pharmacology ||
Anti-ulcer drugs are medications used to prevent and treat ulcers in the stomach and upper part of the small intestine (duodenal ulcers). These ulcers are often caused by an imbalance between stomach acid and the mucosal lining, which protects the stomach lining.
||Scope: Overview of various classes of anti-ulcer drugs, their mechanisms of action, indications, side effects, and clinical considerations.
These simplified slides by Dr. Sidra Arshad present an overview of the non-respiratory functions of the respiratory tract.
Learning objectives:
1. Enlist the non-respiratory functions of the respiratory tract
2. Briefly explain how these functions are carried out
3. Discuss the significance of dead space
4. Differentiate between minute ventilation and alveolar ventilation
5. Describe the cough and sneeze reflexes
Study Resources:
1. Chapter 39, Guyton and Hall Textbook of Medical Physiology, 14th edition
2. Chapter 34, Ganong’s Review of Medical Physiology, 26th edition
3. Chapter 17, Human Physiology by Lauralee Sherwood, 9th edition
4. Non-respiratory functions of the lungs https://academic.oup.com/bjaed/article/13/3/98/278874
1. Review article:
OT surveillance: Air sampling or Conventional swabbing?!
ABSTRACT
Surgical site infections (SSIs) are the second to third most common site of health care
associated infections. These complications of surgical procedures cause considerable
morbidity, if these occur deep at the site of the procedure, can carry mortality as high as
77 %[1]. There is considerable evidence available to indicate that the surgical site infections are
a significant health risk to hospital patients. Sources of infection may be either endogenous
(from the patient himself) or exogenous from the theatre environment. A large body of
information is available which indicates that prevention of post operative infection is
dependent on several factors including effective theatre design, sterilisation and disinfection
procedures, good surgical technique, bacterial contamination of theatre air, discipline which
includes restricting the movement of staff[2]. Many of debates are extended over on this topic
including the frequency of microbiological surveillance for operation theatres.
Key words: Air sampling, three bucket system, slit sampler, colony forming units
INTRODUCTION & SITUATION ANALYSIS
Even today most of the surgeons are worrying about the OT associated infections with
anaerobes like clostridium tetani in most of the instances. Infections with Cl. tetani are
associated with very bad surgical procedures which includes the over jealous manipulations of
the tissues of surgical site and leaving the dead tissue in the surgical site at the end of the
procedure and also heavy dust in the operation theatre environment. Surveillance for clostridial
spores is an age old concept of OT surveillance and lost its importance with the available and
applicable OT sterilization and disinfection awareness programmes and practices.
Routine testing for clostridial spores is not mandatory except during certain situations like
new constructions or structural alterations are made to the theatre. But pyogenic infections
mostly with S.aureus and S.epidermidis are possible even with technically qualitative surgical
procedures[3]. Healthy carriers have been found to shed staphylococci which is responsible for
inevitable airborne contamination. While there is evidence to indicate that most outbreaks are
caused by heavy dispersers[4], every attempt should be made to minimize airborne transmission
within operating theatres. Studies in a number of operating theatres have suggested that there is
1
2. a general relationship between total air count and risk of infection. Counts in the range of
700-1800/m 3 were related to significant risk of infection and when they were under 180/m 3 the
risk was slight[6].
So prevention of airborne microbial contamination will prevent the surgical site infections.
To achieve this basic strategy we should follow the certain guidelines. Which would include,
proper and continuing education to staff to prevent shedding of microbes and restrict the
unnecessary movements of OT staff within and outside the OT environment.
MEASURES TO REDUCE MICROBIAL LOAD IN OT:
Fumigation alone cannot sterilize or make the OT environment safe. Failure to provide
adequate operation theatre ventilation is associated with risk of postoperative infections.
Theatre ventilation has been found to be a critical factor in prosthetic and joint surgery[6].
While maintaining the proper ventilation ,we have to be careful about the microbial load in the
OT environment .Filtration of OT air by fitting the HEPA filters are mandatory to fulfill the
above criteria. Since the operation theater environments are the dynamic, good equipment and
arrangements are only not safe since it becomes unsafe because of human activities. Culture
swabs from unnecessary surfaces of OT environment (roof, upper parts of wall) may causes
confusion during the interpretation of the results[4]. Dust should be removed with cloth wetted
with clean water Chemical and disinfectants should not be used as habit.. Chemical agents or
disinfectants or detergents should be used when OT floor and surfaces are contaminated with
blood and body fluids.Swabbing the surfaces with suitable commercially available disinfectant
Bacillocid (Mixture of dihydroxy formaldehyde, glutaraldehyde and bezalkonium chloride) by
using the three bucket system will remove the majority of the microbes.
• 1st Bucket with water: Dirty mop is rinsed
• 2nd Bucket with fresh water for rinsing: Mop rinsed again in this water
• 3rdBucket with suitable disinfectant: Mop is immersed in the solution and floor
should be mopped liberally. Wash the used mop with disinfectant after use and dry.
STANDARD GUIDELINES AND PLANNING FOR AIR SAMPLING:
There are no nationally agreed standards for any country or place regarding when to
undertake microbiological sampling in the operating theatre and on the interpretation of
sampling results[5]. However, there is sufficient evidence to support the undertaking of
microbiological air sampling in the operation theatre as part of the vigilance & safety of an
operating theatre, after any major structural replacements (not including High Efficiency
Particulate (HEPA) filter changes and as deemed necessary by the hospital infection control
committee. Health care workers should follow certain guidelines before air sampling. Prior to
air sampling, obtain the suitable air sampling equipment from a laboratory, establish laboratory
2
3. time-lines for sample collection, processing and provision of results and should not ignore to
consult the hospital microbiologist or infection control unit.
HOW TO DO THE AIR SAMPLING?.
Bacterial counts in operation theaters are influenced by the number of individuals present,
ventilation and air flow methods. Air sampling should be done after the all new or replacement
work has completed. The ventilation system should run continuously for 24 hours before
sampling and the theatre surfaces and fixed equipment, ducting and air diffuser plates have to
be cleaned.
Settle plate method by using blood agar is being practiced in basic hospitals to detect all
kinds of bacteria in hospital air. Settle plate method with blood agar where the plates have to
keep at 2 ½ feet height on the four corners of room and results are obtained based on the mean
colony number on the all culture plates after a prescribed time. Because of recent advances in
certain surgical procedures and bacterial counts settle plate method is replaced with Slit
sampler and Air centrifuge equipment through which we can calculate the safe levels of
colony counts. There are several different types of air samplers available and the
manufacturer’s instructions for use must be followed. If affordable, the preferred method is to
use a sampler with timer and remote control.
RECOMMENDED METHOD FOR AIR SAMPLING [6]:
1. A single sample should be collected from each operating theatre.
2. The air sampler should be checked for cleanliness before use by following the
manufacturer’s instructions.
3. The theatre being sampled should have been left vacant for a minimum of 15
minutes, preferably one hour. To avoid false-positive results the theatre doors
must be kept closed prior to and during the sampling period .
4. Staff should wear theatre attire and a surgical mask, with proper hands wash
and surgical gloves.
5. Place the agar strips or plate into the sampler under aseptic precautions and
set up the equipment.
6. The air sampler should be placed in the middle of the theatre table at the height
of 2.5 feet and to be secured on a trolley.
7. The air sampler should then be switched on either by remote control or manually,
before leaving the room.
8. The sampling equipment will determine the volume of air sampled. Sampling
volume needs to be more than 0.25 m3 (250 L) and optimally around 1m3 (1000 L).
9. Once sampling is completed, remove the test strips/agar plate aseptically and
3
4. label it clearly and send it the processing environment.
RESULTS AND INTERPRETATION:
Culture plates should be incubated under optimum conditions in the microbiology
laboratory. Early culture reports hardly available until after 24 hours of incubation. Aerobic
cultures on non-selective medium (preferably Blood agar) should not exceed 35 colony –
forming units of bacteria and fungi per cubic meter of air for a conventional theatre and 1cfu
for an ultra clean theatre to perform joint replacement and cardiac surgeries[1]. These counts
are not rigid standards and are intended as a guideline only. Even though the swabs are taken
for OT surveillance to isolate and identify the clostridial spores, air sampling is must to
measure the safer load of microbes. In some of the hospitals OT sampling is done by swabbing
and plating on the blood agar and results are being announced after 24-48 hours of aerobic
incubation. By the above mentioned method quantitative estimation of the microbial load is not
possible. Literature which is supporting for this kind of practice is not available from various
sources. Moreover, this type of cultures on non-selective medium will create unnecessary
confusion while detecting OT sterilization status and which should be abandoned.
REFERENCES:
1. Davis N., Curry A, Gambhir AK, Panigrahi H, Walker CR, Wilkins EG, Worsley MA
and Kay PR Intraoperative bacterial contamination in operations for joint replacement. J
Bone Joint Surg Br 1999; 81-B:886-9.
2.Colquun J, Partridge L. Computational Fluid Dynamics Applications in Hospital
Ventilation Design. The Austrilian Hospital Engineer 2003 ; 26 (1) 35-40.
3.Guidelines to standards for operating rooms. located at. http://www.health.wa.gov.
4.Geeta Mehta. Microbiological surveillance of operation theatre – 2005.
http://www.orthoteers.org.
5.Dharan S, Pittet D. Environmental controls in operating theatres. J Hosp infect 2002;
51(2) 79-84.
6.Department of Health, Western Australia . Private Hospital Guidelines, 3rd edition.
1998. http://www.health.wa.gov.
4