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International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072
© 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7027
Diagnosis of Diabetic Retinopathy using Machine Learning algorithms
M.Rajkumar1 , P.Charulatha2 , P.Hima Bindu3 , A.V.Kiruthika4
1Associate Professor, Department of Computer Science and Engineering, R.M.D Engineering College,
Gummidipoondi
2Student, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi
3Student, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi
4Student, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi
---------------------------------------------------------------------***---------------------------------------------------------------------
Abstract - Diabetic retinopathy is a prevalent eye
disease in diabetic patients and is the most common cause
of visual impairment/blindness among the diabetic
patients. Diabetic retinopathy requires early detection in
order to prevent the patients from losing their vision. Thus,
this paper focuses on decision about the presence of
disease by applying ensemble of machine learning
classifying algorithms on features extracted from output of
different retinal image processing algorithms, like
diameter of optic disk, lesion specific (microaneurysms,
exudates), image level (prescreening, AM/FM, quality
assessment). Decision making for predicting the presence
of diabetic retinopathy was performed using machine
learning algorithms. The main motive is to automatically
classify the grade of non-proliferative diabetic retinopathy
in any retinal image. In order to do that, an initial image
processing stage isolates the necessary features from the
blood vessels (microaneurysms, hard-exudates) that can
be used by a support vector machine to figure out the
retinopathy grade of each retinal image and it is depicted
in a graphical format. The next stage is to detect the level
of accuracy using stochastic gradient descent algorithm
and it was found that 91% of accuracy level was achieved
in our proposed method.
Key Words: Diabetic retinopathy, Support Vector Machine,
Stochastic Gradient Descent Algorithm Optic disk, Lesion
Specific Image.
1.INTRODUCTION
Diabetic retinopathy is a dreadful and a very predominant
eye disease. It is the most common cause of vision lossin the
working-age population of developed countries of an
estimated 285 million people with diabetes mellitus
worldwide, approximately one third have signs of DR and of
these, a further one third of DR is vision-threatening DR. In
addition to vision loss, DR has also been showntocontribute
to the development of other diabetes-related complications
including nephropathy, peripheral neuropathy and
cardiovascular events. Diabetic retinopathy is caused when
diabetes damages the blood vessels insidetheretina,leaking
blood and fluids into the surrounding tissue. This fluid
leakage produces microaneurysms, hemorrhages, hard
exudates, and cotton wool spots (a.k.a., soft exudates).
Diabetic retinopathy is a silent disease and may only be
recognized by patients when changes in the retina have
progressed to a level where treatment becomes difficult or
even impossible. Automaticdetectionofdiabeticretinopathy
will lead to a large amount of savings of time and effort.
Thus, Wu et al proposed a method for automaticdetection of
microaneurysms in retinal fundus images. Several image
pre-processing techniques have alsobeenproposedinorder
to detect diabetic retinopathy. However, despite all these
previous works, automated detectionofdiabeticretinopathy
still remains a field for improvement . Thus, this paper
proposes a new computer assisted diagnosis based on the
digital processing of retinal images in order to help people
detecting diabetic retinopathy in advance. The main goal is
to automatically classify the non-proliferative diabetic
retinopathy grade and the level of advancement of the
disease in any retinal image. In order to do that, an initial
image processing stage isolates blood vessels,
microaneurysms and hard exudates in order to extract
features that can be used by a supportvectormachine(SVM)
to figure out the retinopathy grade of each retinal image. A
decision tree classifier is also implemented to contrast the
results obtained with our SVM classifier. Our proposal has
been tested on a database of hundreds of retinal images.The
level of advancement of the disease(benign or malignant)
has been depicted in a graphical format( Scatter plot,bar
graph) which is easier to understand and interpret the level
of advancement of the disease among the patients. The next
step involves the accuracy detection of the classification
using stochastic gradient descent and the accuracy was
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072
© 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7028
found to be 84% and SVM was also used which also
produced an accuracy level of 63%.
.
Fig -1: Advancement of disease among patients
1. EXISTING METHODS
In previous methods,they deployed supervised learning
where,the segmented image is compared with a reference
image.The main drawback here is that it cannot checks all
characteristics of the disease,insteadcomparesonlywith the
characteristics of the fed image.There are also othertypes of
detection methods like kernel PCA,Guassian
DD,PCA,Rotation symmetric method,Lesion segmentation
algorithm, Wavelet transforms,Probablistic neural
networks,Rational homography are used.
Algorithms like Kernel PCA,PCA DD and Guassian DD lacks
accuracy and fails to correct backgrounds estimationerrors.
In Lesion transformation and Wavelet transformation the
results are with high noise, these noises deviates theresults.
Fig -2: Image Processing in existing methods
In all existing methods neural networks are used ,which
requires high technical knowledge and involves more
complex algorithms.
2. PROPOSED METHODS
“Support Vector Machine” (SVM) is a supervised machine
learning algorithm which can be used for both classification
or regression challenges. However, it is mostly used in
classification problems. In this algorithm, we plot each data
item as a point in n-dimensional space(wherenisnumberof
features you have) with the value of each feature being the
value of a particular coordinate. Then, we perform
classification by finding the hyper-plane that differentiate
the two classes very well. Support Vectors are simplythe co-
ordinates of individual observation.SupportVectorMachine
is a frontier which best segregates the two classes.
Fig -3: Support Vectors
Fig -4: Image Processing
Identify the right hyper-plane (Scenario-1): Here, we have
three hyper-planes (A, B and C). Now, identify the right
hyper-plane to classify star and circle.
You need to remember a thumb rule to identify the right
hyper-plane: “Select the hyper-plane which segregates the
two classes better”. In this scenario, hyper-plane “B” has
excellently performed this job.
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072
© 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7029
Identify the right hyper-plane (Scenario-2): Here, we have
three hyper-planes (A, B and C) and all are segregating the
classes well.Margin for hyper-plane C is high as comparedto
both A and B. Hence, we name the right hyper-plane as C.
Another lightning reason for selecting the hyper-plane with
higher margin is robustness. If we select a hyper-plane
having low margin then there is high chance of miss-
classification.Identify the right hyper-plane (Scenario-
3):Hint: Use the rules as discussed in previous section to
identify the right hyper-plane
Implementing SVM in Python and R?
In Python, scikit-learn is a widely used library for
implementing machine learning algorithms, SVM is also
available in scikit-learnlibraryandfollowthesamestructure
(Import library, object creation, fitting model and
prediction). The e1071 package in R is used to create
Support Vector Machines with ease. It has helper functions
as well as code for the Naive Bayes Classifier. The creation of
a support vector machine in R and Python follow similar
approaches.
How to tune Parameters of SVM?
Tuning parameters value for machine learning algorithms
effectively improvesthemodel performance.Let’slook atthe
list of parameters available with SVM.
3. CONCLUSIONS
There are many difficulties we faced while working. First of
all, there’s a lot more to do before an algorithm like this can
be used widely. For example, as a classifier algorithm KNN
and NNET was remarkable in percentagebut wehadto work
more on binary classification. Secondly, if we could manage
more of our training data we could train our algorithmmore
to achieve more accuracy. Furthermore, we also faced some
problems while choosing algorithms.It wasquitedifficult for
us to choose some specific machine learning algorithmsthat
would give accurate classification of the disease. In addition
we used simple techniques for feature selection and scaling
and possibly we could arrive at better results byintroducing
more complex techniques for selecting and generating
features. We looked at small subspaces for model
parameters. Possibility there beotherparameterspacesthat
would yield better performingmodels.Forthesefewamount
of data in our dataset we faced difficulties in implementing
the classification.
REFERENCES
[1] Gandhi M. and Dhanasekaran R. (2013). Diagnosis of
Diabetic Retinopathy Using Morphological Process andSVM
Classifier, IEEE International conference on Communication
and Signal Processing, India pp: 873-877
[2] Li T, Meindert N, Reinhardt JM, Garvin MK, Abramoff MD
(2013) Splat Feature Classification with Application to
Retinal Hemorrhage Detection in Fundus Images, IEEE
Transactions on Medical Imaging, 32: 364-375
[3] Yau JW, Rogers SL, Kawasaki R, Lamoureux EL, Kowalski
JW, Bek T, et al. Global prevalence and major risk factors of
diabetic retinopathy. Diabetes Care. 2012;35:556–64
[4] BoserB ,Guyon I.G,Vapnik V., "A Training Algorithm for
Optimal Margin Classifiers", Proc. Fifth Ann. Workshop
Computational Learning Theory,pp. 144-152, 1992.
[5] Mitchell, T. (1997). Machine Learning, McGrawHill.ISBN
0-07-042807-7., McGrawHill, Inc. New York, NY, USA.
Published on March 1, 1997
[6] Alex C, Boston A. (2016).Artificial Intelligence, Deep
Learning, and Neural Networks, Explained (16:n37)
[7] Saimadhu P. How the RandomForestAlgorithmWorksin
Machine Learning. Published on May 22, 2017
[8] Boulesteix, A.-L., Janitza, S., Kruppa, J., & König, I. R.
(2012). Overview of random forest methodology and
practical guidance with emphasis on computational biology
and bioinformatics. Wiley Interdisciplinary Reviews: Data
Mining and Knowledge Discovery, 2(6), 493–507.
[9] Jason B, Boinee P.“Machine Learning Algorithms”2(3),
138–147. Published on 15, 2016.
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056
Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072
© 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7030
[10] Boser B. E, Guyon I. M.,Vapnik V. N. (1992). “A training
algorithm for optimal margin classiers”.Proceedings of the
5th Annual Workshop on Computational Learning Theory
COLT'92, 152 Pittsburgh, PA, USA. ACM Press, July 1992. On
Page(s): 144-152
[11]Wikipedia.http://en.wikipedia.org/wiki/Support_vector
_machine.
[12] Ben-Hur.A, Weston.J (2009) ."A User's Guide toSupport
Vector Machines". Data Mining Techniques for the Life
Science.Humana Press. On Page(s): 223-239.

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IRJET- Diagnosis of Diabetic Retinopathy using Machine Learning Algorithms

  • 1. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072 © 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7027 Diagnosis of Diabetic Retinopathy using Machine Learning algorithms M.Rajkumar1 , P.Charulatha2 , P.Hima Bindu3 , A.V.Kiruthika4 1Associate Professor, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi 2Student, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi 3Student, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi 4Student, Department of Computer Science and Engineering, R.M.D Engineering College, Gummidipoondi ---------------------------------------------------------------------***--------------------------------------------------------------------- Abstract - Diabetic retinopathy is a prevalent eye disease in diabetic patients and is the most common cause of visual impairment/blindness among the diabetic patients. Diabetic retinopathy requires early detection in order to prevent the patients from losing their vision. Thus, this paper focuses on decision about the presence of disease by applying ensemble of machine learning classifying algorithms on features extracted from output of different retinal image processing algorithms, like diameter of optic disk, lesion specific (microaneurysms, exudates), image level (prescreening, AM/FM, quality assessment). Decision making for predicting the presence of diabetic retinopathy was performed using machine learning algorithms. The main motive is to automatically classify the grade of non-proliferative diabetic retinopathy in any retinal image. In order to do that, an initial image processing stage isolates the necessary features from the blood vessels (microaneurysms, hard-exudates) that can be used by a support vector machine to figure out the retinopathy grade of each retinal image and it is depicted in a graphical format. The next stage is to detect the level of accuracy using stochastic gradient descent algorithm and it was found that 91% of accuracy level was achieved in our proposed method. Key Words: Diabetic retinopathy, Support Vector Machine, Stochastic Gradient Descent Algorithm Optic disk, Lesion Specific Image. 1.INTRODUCTION Diabetic retinopathy is a dreadful and a very predominant eye disease. It is the most common cause of vision lossin the working-age population of developed countries of an estimated 285 million people with diabetes mellitus worldwide, approximately one third have signs of DR and of these, a further one third of DR is vision-threatening DR. In addition to vision loss, DR has also been showntocontribute to the development of other diabetes-related complications including nephropathy, peripheral neuropathy and cardiovascular events. Diabetic retinopathy is caused when diabetes damages the blood vessels insidetheretina,leaking blood and fluids into the surrounding tissue. This fluid leakage produces microaneurysms, hemorrhages, hard exudates, and cotton wool spots (a.k.a., soft exudates). Diabetic retinopathy is a silent disease and may only be recognized by patients when changes in the retina have progressed to a level where treatment becomes difficult or even impossible. Automaticdetectionofdiabeticretinopathy will lead to a large amount of savings of time and effort. Thus, Wu et al proposed a method for automaticdetection of microaneurysms in retinal fundus images. Several image pre-processing techniques have alsobeenproposedinorder to detect diabetic retinopathy. However, despite all these previous works, automated detectionofdiabeticretinopathy still remains a field for improvement . Thus, this paper proposes a new computer assisted diagnosis based on the digital processing of retinal images in order to help people detecting diabetic retinopathy in advance. The main goal is to automatically classify the non-proliferative diabetic retinopathy grade and the level of advancement of the disease in any retinal image. In order to do that, an initial image processing stage isolates blood vessels, microaneurysms and hard exudates in order to extract features that can be used by a supportvectormachine(SVM) to figure out the retinopathy grade of each retinal image. A decision tree classifier is also implemented to contrast the results obtained with our SVM classifier. Our proposal has been tested on a database of hundreds of retinal images.The level of advancement of the disease(benign or malignant) has been depicted in a graphical format( Scatter plot,bar graph) which is easier to understand and interpret the level of advancement of the disease among the patients. The next step involves the accuracy detection of the classification using stochastic gradient descent and the accuracy was
  • 2. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072 © 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7028 found to be 84% and SVM was also used which also produced an accuracy level of 63%. . Fig -1: Advancement of disease among patients 1. EXISTING METHODS In previous methods,they deployed supervised learning where,the segmented image is compared with a reference image.The main drawback here is that it cannot checks all characteristics of the disease,insteadcomparesonlywith the characteristics of the fed image.There are also othertypes of detection methods like kernel PCA,Guassian DD,PCA,Rotation symmetric method,Lesion segmentation algorithm, Wavelet transforms,Probablistic neural networks,Rational homography are used. Algorithms like Kernel PCA,PCA DD and Guassian DD lacks accuracy and fails to correct backgrounds estimationerrors. In Lesion transformation and Wavelet transformation the results are with high noise, these noises deviates theresults. Fig -2: Image Processing in existing methods In all existing methods neural networks are used ,which requires high technical knowledge and involves more complex algorithms. 2. PROPOSED METHODS “Support Vector Machine” (SVM) is a supervised machine learning algorithm which can be used for both classification or regression challenges. However, it is mostly used in classification problems. In this algorithm, we plot each data item as a point in n-dimensional space(wherenisnumberof features you have) with the value of each feature being the value of a particular coordinate. Then, we perform classification by finding the hyper-plane that differentiate the two classes very well. Support Vectors are simplythe co- ordinates of individual observation.SupportVectorMachine is a frontier which best segregates the two classes. Fig -3: Support Vectors Fig -4: Image Processing Identify the right hyper-plane (Scenario-1): Here, we have three hyper-planes (A, B and C). Now, identify the right hyper-plane to classify star and circle. You need to remember a thumb rule to identify the right hyper-plane: “Select the hyper-plane which segregates the two classes better”. In this scenario, hyper-plane “B” has excellently performed this job.
  • 3. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072 © 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7029 Identify the right hyper-plane (Scenario-2): Here, we have three hyper-planes (A, B and C) and all are segregating the classes well.Margin for hyper-plane C is high as comparedto both A and B. Hence, we name the right hyper-plane as C. Another lightning reason for selecting the hyper-plane with higher margin is robustness. If we select a hyper-plane having low margin then there is high chance of miss- classification.Identify the right hyper-plane (Scenario- 3):Hint: Use the rules as discussed in previous section to identify the right hyper-plane Implementing SVM in Python and R? In Python, scikit-learn is a widely used library for implementing machine learning algorithms, SVM is also available in scikit-learnlibraryandfollowthesamestructure (Import library, object creation, fitting model and prediction). The e1071 package in R is used to create Support Vector Machines with ease. It has helper functions as well as code for the Naive Bayes Classifier. The creation of a support vector machine in R and Python follow similar approaches. How to tune Parameters of SVM? Tuning parameters value for machine learning algorithms effectively improvesthemodel performance.Let’slook atthe list of parameters available with SVM. 3. CONCLUSIONS There are many difficulties we faced while working. First of all, there’s a lot more to do before an algorithm like this can be used widely. For example, as a classifier algorithm KNN and NNET was remarkable in percentagebut wehadto work more on binary classification. Secondly, if we could manage more of our training data we could train our algorithmmore to achieve more accuracy. Furthermore, we also faced some problems while choosing algorithms.It wasquitedifficult for us to choose some specific machine learning algorithmsthat would give accurate classification of the disease. In addition we used simple techniques for feature selection and scaling and possibly we could arrive at better results byintroducing more complex techniques for selecting and generating features. We looked at small subspaces for model parameters. Possibility there beotherparameterspacesthat would yield better performingmodels.Forthesefewamount of data in our dataset we faced difficulties in implementing the classification. REFERENCES [1] Gandhi M. and Dhanasekaran R. (2013). Diagnosis of Diabetic Retinopathy Using Morphological Process andSVM Classifier, IEEE International conference on Communication and Signal Processing, India pp: 873-877 [2] Li T, Meindert N, Reinhardt JM, Garvin MK, Abramoff MD (2013) Splat Feature Classification with Application to Retinal Hemorrhage Detection in Fundus Images, IEEE Transactions on Medical Imaging, 32: 364-375 [3] Yau JW, Rogers SL, Kawasaki R, Lamoureux EL, Kowalski JW, Bek T, et al. Global prevalence and major risk factors of diabetic retinopathy. Diabetes Care. 2012;35:556–64 [4] BoserB ,Guyon I.G,Vapnik V., "A Training Algorithm for Optimal Margin Classifiers", Proc. Fifth Ann. Workshop Computational Learning Theory,pp. 144-152, 1992. [5] Mitchell, T. (1997). Machine Learning, McGrawHill.ISBN 0-07-042807-7., McGrawHill, Inc. New York, NY, USA. Published on March 1, 1997 [6] Alex C, Boston A. (2016).Artificial Intelligence, Deep Learning, and Neural Networks, Explained (16:n37) [7] Saimadhu P. How the RandomForestAlgorithmWorksin Machine Learning. Published on May 22, 2017 [8] Boulesteix, A.-L., Janitza, S., Kruppa, J., & König, I. R. (2012). Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics. Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery, 2(6), 493–507. [9] Jason B, Boinee P.“Machine Learning Algorithms”2(3), 138–147. Published on 15, 2016.
  • 4. International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 06 Issue: 03 | Mar 2019 www.irjet.net p-ISSN: 2395-0072 © 2019, IRJET | Impact Factor value: 7.211 | ISO 9001:2008 Certified Journal | Page 7030 [10] Boser B. E, Guyon I. M.,Vapnik V. N. (1992). “A training algorithm for optimal margin classiers”.Proceedings of the 5th Annual Workshop on Computational Learning Theory COLT'92, 152 Pittsburgh, PA, USA. ACM Press, July 1992. On Page(s): 144-152 [11]Wikipedia.http://en.wikipedia.org/wiki/Support_vector _machine. [12] Ben-Hur.A, Weston.J (2009) ."A User's Guide toSupport Vector Machines". Data Mining Techniques for the Life Science.Humana Press. On Page(s): 223-239.