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INTRODUCTION TO PLANT VIRUSES
Virus:
Virus is set of one or more nucleic acid template molecules normally
encased in coats of protein or lip-protein and organize its own
replication only within specific host cells
Virion:
A complete mature viral particle is called virion
Prion:
Smaller infectious protein particles encoded by a chromosomal gene
of the host cells
Viroids: Small, low-molecular-weight ribonucleic acids (RNAs) that
can infect plant cells, replicate themselves and cause disease. OR
Naked, single-stranded circular molecule of infectious RNA called
viroid
Virusoids:
The extra-small circular RNA component of some isometric RNA
viruses
Importance of Plant Viruses
➢ Plant viruses are viruses that multiply by using
the material synthesized by the host to
manufacture new virus particles and cause
infection
➢ Beneficial Aspects:
➢ Used as color breaking agent in ornamental
plants. Ornamental plants become attractive e.g.
Tulip mosaic virus
➢ Used as a vector in genetic engineering, CuMV
➢ Viruses used as a cross protection
Harmful Aspects
➢ Causes harmful diseases in humans, animals,
and plants
➢ Cause reduction in the growth of the plants.
➢ Reduction in yield and ultimately failure of the
crop
➢ Affect the quality and quantity of the production
➢ Make the plants more vulnerable to other
organisms (Insects) e.g. TMV, SCMV, CLCuV,
CTV
COTTON LEAF CURL DISEASE
CLCuV, ssDNA
Genus: Begomovirus, Family: Geminiviridae
➢ Occurrence & Importance:
➢ First reported in Nigeria in 1912
➢ In 1959 from Philippines
➢ In 1967 in Pakistan near Multan
➢ Epidemic form in 1993-95 in Pakistan
➢ Most serious disease of cotton
➢ Cause losses from 22.38-68.50%
Symptoms
➢ Thickening of veins
➢ Color of infected plants become dark
green
➢ Upward or downward curling of leaves
➢ Leaf enation
➢ Twisted leaf petioles
➢ Stunting of plants
Symptoms
Symptoms
Disease Cycle
➢ Not seed or soil-borne
➢ Over winter on alternate hosts (tomato,
tobacco, beans, lehli, okra, datura etc
➢ Transmitted by whitefly (Bemisia tabaci)
➢ 30 Min. feeding on infected plants
➢ 24 hours latent period
➢ 30 Min. inoculation feeding period
➢ Retention period: through out life of
whitefly
Epidemiology
➢ Minimum temp. 27-28 0C
➢ Maximum temp. 38-40 0C
➢ Relative humidity: 56-60%
➢ Susceptible host on large area
➢ Less rainfall or no rainfall
➢ Abundance of whitefly population
Management
➢ Tolerant varieties like Allah Din One (A-
One), MNH-886 and FH-142
➢ Destruction of alternate hosts
➢ Uproot & burry first observed infected
plants
➢ Control insect vector (Imidacloprid, polo)
➢ Use of nutrients also help to reduce the
disease incidence
BANANA BUNCHY TOP DISEASE
(BBTV), ssDNA VIRUS
(Genus Babuvirus, Family Nanoviridae)
➢ Most important disease of banana crop
➢ Occur in all banana producing countries
(Fiji, Indonesia, Malaysia, Australia, Sri-
lanka, Pakistan, India)
➢ Infected plants produce no fruits
Symptoms
➢ Dark green streaks seen on petioles &
veins of new leaves looking against light
➢ Leaves arise in clusters
➢ Margins of leaves become chlorotic &
rolled upward
➢ Top of plant become narrow, upright &
closer appearing bunchy
➢ Plants show stunted growth
➢ Inflorescence fails to emerge
Disease cycle
➢ Vector: Black banana aphid (Pentalonia
nigronervosa)
➢ Also transmitted through propagative
materials (rhizomes, suckers, tissue-
cultured meristem)
➢ Aphid feed 17 hrs to become infective
➢ Maxi. Vector concentration at base of stem
Disease cycle
Epidemiology
➢ 18-20 0C temperature
➢ 41-84% Relative Humidity
Management
➢ Quarantine measures
➢ Use of virus free propagative material
➢ Locating new plantation away from old
➢ Destroying all volunteer banana plants
➢ Uprooting & burning of infected plants
➢ Control vector with insecticidal soap water spray
or insecticides (Prentox Diazinon AG500)
➢ Cultivate resistant varieties (Gross Michel)
Potato Leaf Roll Disease
(PLRV), ssRNA
Genus: Polerovirus, Family: Luteoviridae
➢ Occur world wide
➢ Most destructive virus of potato
➢ Yield losses more than 50%
Symptoms
➢ Appear mostly on lower leaves
➢ Leaflets roll upwards
➢ Margins & tips of leaves become yellow
➢ Leaves become leathery & brittle
➢ Plants stunted & have upright growth
➢ No. of tubers/plant & size is reduced
➢ Phloem necrosis occur in tubers
Disease cycle
➢ More than 10 species of aphid act as
vector (Myzus persicae)
➢ Infected tubers are primary source of
infection
➢ Aphid feed for several hrs (48-54 hrs)
➢ Alternate hosts are Datura stramonium
Epidemiology
➢ 15-20 0C temperature
➢ 40-65% Relative Humidity
Management
➢ Obtain certified seed
➢ Plant early in the season
➢ Pulled out sick plants as soon as located
➢ Detop plants in last week of December
➢ Apply systemic insecticides (aldicarb,
carbofuran)
Tobacco Mosaic Virus
(TMV) ss-RNA
Genus: Tobamovirus, Family: Virgaviridae
➢ First virus ever discovered in history
➢ Known to occur in all the tobacco growing
countries of the world
➢ 55% reduction in yield has been reported
➢ Sub stranded produce fetch low price in
the market
Symptoms
➢ Leaves show mild veins clearing
➢ Mottle and mosaic pattern
➢ Light discoloration along the veins of
young leaves
➢ Wrinkling, crinkling, twisting margins and
narrowing of leaf lets
➢ Dwarfing of entire plant
Disease cycle and epidemiology
➢ Survive in herbaceous and woody plants
➢ Tomato, Potato, pepper grown indoor are source
of infection
➢ Virus present in plant debris, soil, cloths and
even manufactured tobacco cigarette and cigar
➢ Contact with the wounded plants
➢ No insect vector, Mechanical transmission
➢ Wide host range of 500 species of flowering
plants
➢ Temp. 28-32 ºC, RH 44-56%
Management
➢ Use clean and healthy seed in the nursery
➢ All workers should disinfect their hands
➢ Avoid chewing of tobacco in the field
➢ Rouging out infected plants
➢ Crop rotation with maize and wheat, avoiding
tomato and pepper
➢ Healthy leaves harvest first than infected one
➢ Field sanitation practices
Sugarcane Mosaic Virus Disease
(SCMV) ss-RNA
Family: Potyviridae Genus: Potyvirus
➢ First recorded in Java in 1892, in Punjab in
1926-27
➢ Occur in every sugarcane growing
country
➢ Estimated yield losses vary greatly upon
cultivar and environmental conditions
SYMPTOMS
➢ Contrasting shades of green, islands of normal
green or yellowish chlorotic areas on the leaf
blade
➢ leaf reddening or necrosis
➢ Chlorotic areas most evident at base of the leaf
➢ Chlorotic areas may also be present on the leaf
sheath, but rarely on the stalk
➢ Young, rapidly growing plants are more
susceptible to infection
Disease cycle and epidemiology
➢ There are three principal modes of spread
of SCMV:
➢ (1) by aphid vectors,
➢ (2) by infected seed cane and
➢ (3) by mechanical inoculation.
➢ Only aphid vectors and infected seed cane
are important in the field.
➢ Temp. 35-38 ºC, RH 68-78%
Management
➢ Resistant varieties (CPF 242, HSF 240, SPF
234) is the most effective method to control
➢ Use disease free seed canes
➢ Management practices targeting insect vectors
➢ Control of mosaic through heat treatment only
practical in quarantine situations
➢ Some plants recover from mosaic by nutritional
application
Citrus Tristeza Virus (CTV)
or Quick decline, ss-RNA
Family: Closteroviridae Genus: Closterovirus
➢ Biggest threats to citrus production in globe
➢ More than 30 virus, virus-like diseases of citrus
known in the world, of which CTV is the most
destructive.
➢ The first tristeza disaster was reported in 1930's
in Argentina, where 90% of the citrus was
planted on sour orange rootstock
Symptoms
➢ Yellowing of leaves
➢ Dieback of the phloem in the sour orange
rootstock below the bud union
➢ Rootstock being girdled
➢ 'Slow decline' where trees decline in a period of
years
➢ Stunting where the virus does not kill the tree,
but the tree does not grow
➢ Deep pits are present under depressed areas of
the bark
Disease cycle
➢ Vectors of CTV are black or brown citrus aphid
(Toxoptera citricida)
➢ Due to the aphid introduction, CTV rate of
spread has increased dramatically
➢ Additionally, growers have aided in the spread of
the virus with the propagation of trees using
infected bud-wood.
➢ Temperature, 20-27 0C RH, 55-70%
Management
➢ Exclude any introduction of severe strains
➢ Need for mild strain protection in the future
➢ Strict control by quarantine must be continued
➢ Rootstocks that offer resistance to tristeza
decline include the citranges (C-35, Carrizo,
Troyer), Citrumelos (Swingle), mandarins
THANKS
Dr. Safdar Ali
Dr. Luqman Amrao

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INTRODUCTION TO PLANT VIRUSES

  • 1. INTRODUCTION TO PLANT VIRUSES Virus: Virus is set of one or more nucleic acid template molecules normally encased in coats of protein or lip-protein and organize its own replication only within specific host cells Virion: A complete mature viral particle is called virion Prion: Smaller infectious protein particles encoded by a chromosomal gene of the host cells Viroids: Small, low-molecular-weight ribonucleic acids (RNAs) that can infect plant cells, replicate themselves and cause disease. OR Naked, single-stranded circular molecule of infectious RNA called viroid Virusoids: The extra-small circular RNA component of some isometric RNA viruses
  • 2. Importance of Plant Viruses ➢ Plant viruses are viruses that multiply by using the material synthesized by the host to manufacture new virus particles and cause infection ➢ Beneficial Aspects: ➢ Used as color breaking agent in ornamental plants. Ornamental plants become attractive e.g. Tulip mosaic virus ➢ Used as a vector in genetic engineering, CuMV ➢ Viruses used as a cross protection
  • 3. Harmful Aspects ➢ Causes harmful diseases in humans, animals, and plants ➢ Cause reduction in the growth of the plants. ➢ Reduction in yield and ultimately failure of the crop ➢ Affect the quality and quantity of the production ➢ Make the plants more vulnerable to other organisms (Insects) e.g. TMV, SCMV, CLCuV, CTV
  • 4. COTTON LEAF CURL DISEASE CLCuV, ssDNA Genus: Begomovirus, Family: Geminiviridae ➢ Occurrence & Importance: ➢ First reported in Nigeria in 1912 ➢ In 1959 from Philippines ➢ In 1967 in Pakistan near Multan ➢ Epidemic form in 1993-95 in Pakistan ➢ Most serious disease of cotton ➢ Cause losses from 22.38-68.50%
  • 5. Symptoms ➢ Thickening of veins ➢ Color of infected plants become dark green ➢ Upward or downward curling of leaves ➢ Leaf enation ➢ Twisted leaf petioles ➢ Stunting of plants
  • 8.
  • 9.
  • 10. Disease Cycle ➢ Not seed or soil-borne ➢ Over winter on alternate hosts (tomato, tobacco, beans, lehli, okra, datura etc ➢ Transmitted by whitefly (Bemisia tabaci) ➢ 30 Min. feeding on infected plants ➢ 24 hours latent period ➢ 30 Min. inoculation feeding period ➢ Retention period: through out life of whitefly
  • 11.
  • 12. Epidemiology ➢ Minimum temp. 27-28 0C ➢ Maximum temp. 38-40 0C ➢ Relative humidity: 56-60% ➢ Susceptible host on large area ➢ Less rainfall or no rainfall ➢ Abundance of whitefly population
  • 13. Management ➢ Tolerant varieties like Allah Din One (A- One), MNH-886 and FH-142 ➢ Destruction of alternate hosts ➢ Uproot & burry first observed infected plants ➢ Control insect vector (Imidacloprid, polo) ➢ Use of nutrients also help to reduce the disease incidence
  • 14. BANANA BUNCHY TOP DISEASE (BBTV), ssDNA VIRUS (Genus Babuvirus, Family Nanoviridae) ➢ Most important disease of banana crop ➢ Occur in all banana producing countries (Fiji, Indonesia, Malaysia, Australia, Sri- lanka, Pakistan, India) ➢ Infected plants produce no fruits
  • 15. Symptoms ➢ Dark green streaks seen on petioles & veins of new leaves looking against light ➢ Leaves arise in clusters ➢ Margins of leaves become chlorotic & rolled upward ➢ Top of plant become narrow, upright & closer appearing bunchy ➢ Plants show stunted growth ➢ Inflorescence fails to emerge
  • 16.
  • 17. Disease cycle ➢ Vector: Black banana aphid (Pentalonia nigronervosa) ➢ Also transmitted through propagative materials (rhizomes, suckers, tissue- cultured meristem) ➢ Aphid feed 17 hrs to become infective ➢ Maxi. Vector concentration at base of stem
  • 19. Epidemiology ➢ 18-20 0C temperature ➢ 41-84% Relative Humidity
  • 20. Management ➢ Quarantine measures ➢ Use of virus free propagative material ➢ Locating new plantation away from old ➢ Destroying all volunteer banana plants ➢ Uprooting & burning of infected plants ➢ Control vector with insecticidal soap water spray or insecticides (Prentox Diazinon AG500) ➢ Cultivate resistant varieties (Gross Michel)
  • 21. Potato Leaf Roll Disease (PLRV), ssRNA Genus: Polerovirus, Family: Luteoviridae ➢ Occur world wide ➢ Most destructive virus of potato ➢ Yield losses more than 50%
  • 22. Symptoms ➢ Appear mostly on lower leaves ➢ Leaflets roll upwards ➢ Margins & tips of leaves become yellow ➢ Leaves become leathery & brittle ➢ Plants stunted & have upright growth ➢ No. of tubers/plant & size is reduced ➢ Phloem necrosis occur in tubers
  • 23.
  • 24.
  • 25. Disease cycle ➢ More than 10 species of aphid act as vector (Myzus persicae) ➢ Infected tubers are primary source of infection ➢ Aphid feed for several hrs (48-54 hrs) ➢ Alternate hosts are Datura stramonium
  • 26. Epidemiology ➢ 15-20 0C temperature ➢ 40-65% Relative Humidity
  • 27. Management ➢ Obtain certified seed ➢ Plant early in the season ➢ Pulled out sick plants as soon as located ➢ Detop plants in last week of December ➢ Apply systemic insecticides (aldicarb, carbofuran)
  • 28. Tobacco Mosaic Virus (TMV) ss-RNA Genus: Tobamovirus, Family: Virgaviridae ➢ First virus ever discovered in history ➢ Known to occur in all the tobacco growing countries of the world ➢ 55% reduction in yield has been reported ➢ Sub stranded produce fetch low price in the market
  • 29. Symptoms ➢ Leaves show mild veins clearing ➢ Mottle and mosaic pattern ➢ Light discoloration along the veins of young leaves ➢ Wrinkling, crinkling, twisting margins and narrowing of leaf lets ➢ Dwarfing of entire plant
  • 30.
  • 31. Disease cycle and epidemiology ➢ Survive in herbaceous and woody plants ➢ Tomato, Potato, pepper grown indoor are source of infection ➢ Virus present in plant debris, soil, cloths and even manufactured tobacco cigarette and cigar ➢ Contact with the wounded plants ➢ No insect vector, Mechanical transmission ➢ Wide host range of 500 species of flowering plants ➢ Temp. 28-32 ºC, RH 44-56%
  • 32. Management ➢ Use clean and healthy seed in the nursery ➢ All workers should disinfect their hands ➢ Avoid chewing of tobacco in the field ➢ Rouging out infected plants ➢ Crop rotation with maize and wheat, avoiding tomato and pepper ➢ Healthy leaves harvest first than infected one ➢ Field sanitation practices
  • 33. Sugarcane Mosaic Virus Disease (SCMV) ss-RNA Family: Potyviridae Genus: Potyvirus ➢ First recorded in Java in 1892, in Punjab in 1926-27 ➢ Occur in every sugarcane growing country ➢ Estimated yield losses vary greatly upon cultivar and environmental conditions
  • 34. SYMPTOMS ➢ Contrasting shades of green, islands of normal green or yellowish chlorotic areas on the leaf blade ➢ leaf reddening or necrosis ➢ Chlorotic areas most evident at base of the leaf ➢ Chlorotic areas may also be present on the leaf sheath, but rarely on the stalk ➢ Young, rapidly growing plants are more susceptible to infection
  • 35.
  • 36. Disease cycle and epidemiology ➢ There are three principal modes of spread of SCMV: ➢ (1) by aphid vectors, ➢ (2) by infected seed cane and ➢ (3) by mechanical inoculation. ➢ Only aphid vectors and infected seed cane are important in the field. ➢ Temp. 35-38 ºC, RH 68-78%
  • 37. Management ➢ Resistant varieties (CPF 242, HSF 240, SPF 234) is the most effective method to control ➢ Use disease free seed canes ➢ Management practices targeting insect vectors ➢ Control of mosaic through heat treatment only practical in quarantine situations ➢ Some plants recover from mosaic by nutritional application
  • 38. Citrus Tristeza Virus (CTV) or Quick decline, ss-RNA Family: Closteroviridae Genus: Closterovirus ➢ Biggest threats to citrus production in globe ➢ More than 30 virus, virus-like diseases of citrus known in the world, of which CTV is the most destructive. ➢ The first tristeza disaster was reported in 1930's in Argentina, where 90% of the citrus was planted on sour orange rootstock
  • 39. Symptoms ➢ Yellowing of leaves ➢ Dieback of the phloem in the sour orange rootstock below the bud union ➢ Rootstock being girdled ➢ 'Slow decline' where trees decline in a period of years ➢ Stunting where the virus does not kill the tree, but the tree does not grow ➢ Deep pits are present under depressed areas of the bark
  • 40.
  • 41. Disease cycle ➢ Vectors of CTV are black or brown citrus aphid (Toxoptera citricida) ➢ Due to the aphid introduction, CTV rate of spread has increased dramatically ➢ Additionally, growers have aided in the spread of the virus with the propagation of trees using infected bud-wood. ➢ Temperature, 20-27 0C RH, 55-70%
  • 42. Management ➢ Exclude any introduction of severe strains ➢ Need for mild strain protection in the future ➢ Strict control by quarantine must be continued ➢ Rootstocks that offer resistance to tristeza decline include the citranges (C-35, Carrizo, Troyer), Citrumelos (Swingle), mandarins