GENOMICS:
Karyotypes &
Mutations
Seamon
Karyotype-
• an organized profile
of chromosomes
• arranged and
numbered by size
from largest to
smallest
HUMAN KARYOTYPE
• 23 PAIRS of
chromosomes
called
homologous
chromosomes
• 1 chromosome
from each parent
• That makes 46 total
chromosomes
HUMAN KARYOTYPE
• autosomes-
chromosomes 1-22
• sex chromosomes
• chromosome 23
• X = female
• Y = male
Karyotypes show us…
• sex of the individual
• genetic disorders caused by too few or too
many of a chromosome
Nondisjuction
too many or too few chromosomes are caused
by a mistake in meiosis
Trisomy-21
• three of #21
• likelihood of
Downs Syndrome
increases with
mother’s age
DOWNS SYNDROME
• delayed physical
and mental
development
• flattened face &
eyes slanted
upward
Female with a
single X
• ovaries do not
develop
• do not mature
sexually
TURNER SYNDROME
Male with an extra X
• less facial hair and
muscles
• no sperm
KLINFELTER SYNDROME
Mutations-
• a change in the DNA
• causes changes in genetic code
• can be…
• an entire chromosome
• in any cell
• harmless, beneficial or harmful
• lead to genetic variation
• EXAMPLE: PTC tasters/non-tasters
PTC tasters & non-
tasters
• some people can
taste this bitter
chemical while
others cannot
• it’s genetic
• tasters & non-tasters
have slightly different
receptors (proteins)
on taste buds for
bitter taste
CCG and CCG
GTA and CCG
GTA and GTA
Tasters
Medium Tasters
Non-Tasters
A change in DNA causes
• change in the protein
• which causes a change in function
Gene Mutations
• may involve large areas of DNA or a single
nucleotide
• Point Mutation (of a single nucleotide)
• substitution
• duplication
• deletion
• mutation can code for the wrong amino acid,
leading to difference in function
What is the mRNA codon that would pair with a
DNA sequence of CTC?
The paired mRNA codon is GAG
What is the amino acid that it receives?
glutamic acid
THIS IS WHAT HAPPENS IN A NORMAL CELL
SICKLE CELL ANEMIA
TAKE OUT YOUR CODON CHART
In sickle Cell anemia, in CTC the T gets substituted
with an A resulting in CAC
What is the mutated mRNA codon?
The paired mRNA codon is GUG
What is the mutated amino acid that it receives?
For a mutated (substituted) DNA sequence, the
paired mRNA codon is Valine WRONG AMINO ACID
makes the wrong protein
SICKLE CELL ANEMIA
Frame shift mutation
• point mutation
• a nucleotide is deleted or inserted
• all codons after that are affected… the frame
shifts
• subsequent reading gives a nonsense
sequence of amino acids
ACTIVITY
• THE OLD RED DOG WAS TOO BIG FOR HIS BED
• Deletion that would delete the D in OLD…
• THE OLR EDD OGW AST OOB IGF ORH ISB ED
• Inversion of the word DOG...
• THE OLD RED GOD WAS TOO BIG FOR HIS BED
19
FRAME SHIFT- confuses the
whole message: bad mutation
less of a problem
Chromosome Mutations
MEIOSIS-
• crossing over- pieces of chromosomes are
exchanged
• another source of genetic variation
• new combinations of genes
Translocation
• chromosome
mutation
• fragments trade
with the wrong
chromosome
• not always a
problem
Deletion
• fragment is lost
(often in
translocation)
• Cri du Chat-
deletion in
chromosome 5;
infants have the
‘cry’ of a cat
Inversion
• fragment is lost
flips around
• not always a
problem
Duplication
• sometimes a
piece is repeated
• chromosome #4
has CAG repeated
10 to 30 times
• Gene has too
many repeats of
CAG
• Forms a protein
that clumps in
the brain and
kills nerve cells
• protein formed
does not work
properly
HUNTINGTON’S DISEASE (40 or more repeats)
Huntington’s Disease (HD)
• Early symptoms are forgetfulness and
irritability in 30’s or 40’s
• Progressive deterioration of the nervous
system
• Leads to loss of muscle control and eventually
death
• Because of late onset, it is passed on
unknowingly.
• traits found on the sex chromosomes (X & Y)
• carrier- “carries” the gene but does not have
the disease (often on X chromosome)
X-linked: genes on the X chromosome.
Y-linked: genes on the Y chromosome.
Most are recessive traits
Sex-Linked Traits
EXAMPLES
• baldness
• hemophilia
• muscular dystrophy
• red-green color
blindness
Sex-Linked Traits
red-green color blindness
Color-blindness is recessive.
B = normal
b = colorblind
Father is colorblind. His wife is not.
Father’s genotype is _____
Mother’s genotype is _____
What is the likelihood of them having a
colorblind son? Colorblind daughter?
XbY
XBXB
• X-Linked Trait
• blood does not clot
properly
• Any one of several
mutations on
genes for clotting
factors
• Treatment involves
replacing defective
clotting factor
HEMOPHILIA

Human Genomics1: Karyotypes and Mutations

  • 1.
  • 2.
    Karyotype- • an organizedprofile of chromosomes • arranged and numbered by size from largest to smallest
  • 3.
    HUMAN KARYOTYPE • 23PAIRS of chromosomes called homologous chromosomes • 1 chromosome from each parent • That makes 46 total chromosomes
  • 4.
    HUMAN KARYOTYPE • autosomes- chromosomes1-22 • sex chromosomes • chromosome 23 • X = female • Y = male
  • 5.
    Karyotypes show us… •sex of the individual • genetic disorders caused by too few or too many of a chromosome
  • 6.
    Nondisjuction too many ortoo few chromosomes are caused by a mistake in meiosis
  • 7.
    Trisomy-21 • three of#21 • likelihood of Downs Syndrome increases with mother’s age DOWNS SYNDROME
  • 8.
    • delayed physical andmental development • flattened face & eyes slanted upward
  • 9.
    Female with a singleX • ovaries do not develop • do not mature sexually TURNER SYNDROME
  • 10.
    Male with anextra X • less facial hair and muscles • no sperm KLINFELTER SYNDROME
  • 11.
    Mutations- • a changein the DNA • causes changes in genetic code • can be… • an entire chromosome • in any cell • harmless, beneficial or harmful • lead to genetic variation • EXAMPLE: PTC tasters/non-tasters
  • 12.
    PTC tasters &non- tasters • some people can taste this bitter chemical while others cannot • it’s genetic • tasters & non-tasters have slightly different receptors (proteins) on taste buds for bitter taste
  • 13.
    CCG and CCG GTAand CCG GTA and GTA Tasters Medium Tasters Non-Tasters A change in DNA causes • change in the protein • which causes a change in function
  • 14.
    Gene Mutations • mayinvolve large areas of DNA or a single nucleotide • Point Mutation (of a single nucleotide) • substitution • duplication • deletion • mutation can code for the wrong amino acid, leading to difference in function
  • 15.
    What is themRNA codon that would pair with a DNA sequence of CTC? The paired mRNA codon is GAG What is the amino acid that it receives? glutamic acid THIS IS WHAT HAPPENS IN A NORMAL CELL SICKLE CELL ANEMIA TAKE OUT YOUR CODON CHART
  • 16.
    In sickle Cellanemia, in CTC the T gets substituted with an A resulting in CAC What is the mutated mRNA codon? The paired mRNA codon is GUG What is the mutated amino acid that it receives? For a mutated (substituted) DNA sequence, the paired mRNA codon is Valine WRONG AMINO ACID makes the wrong protein SICKLE CELL ANEMIA
  • 18.
    Frame shift mutation •point mutation • a nucleotide is deleted or inserted • all codons after that are affected… the frame shifts • subsequent reading gives a nonsense sequence of amino acids
  • 19.
    ACTIVITY • THE OLDRED DOG WAS TOO BIG FOR HIS BED • Deletion that would delete the D in OLD… • THE OLR EDD OGW AST OOB IGF ORH ISB ED • Inversion of the word DOG... • THE OLD RED GOD WAS TOO BIG FOR HIS BED 19 FRAME SHIFT- confuses the whole message: bad mutation less of a problem
  • 20.
    Chromosome Mutations MEIOSIS- • crossingover- pieces of chromosomes are exchanged • another source of genetic variation • new combinations of genes
  • 21.
    Translocation • chromosome mutation • fragmentstrade with the wrong chromosome • not always a problem
  • 22.
    Deletion • fragment islost (often in translocation) • Cri du Chat- deletion in chromosome 5; infants have the ‘cry’ of a cat
  • 23.
    Inversion • fragment islost flips around • not always a problem
  • 24.
    Duplication • sometimes a pieceis repeated • chromosome #4 has CAG repeated 10 to 30 times
  • 25.
    • Gene hastoo many repeats of CAG • Forms a protein that clumps in the brain and kills nerve cells • protein formed does not work properly HUNTINGTON’S DISEASE (40 or more repeats)
  • 26.
    Huntington’s Disease (HD) •Early symptoms are forgetfulness and irritability in 30’s or 40’s • Progressive deterioration of the nervous system • Leads to loss of muscle control and eventually death • Because of late onset, it is passed on unknowingly.
  • 27.
    • traits foundon the sex chromosomes (X & Y) • carrier- “carries” the gene but does not have the disease (often on X chromosome) X-linked: genes on the X chromosome. Y-linked: genes on the Y chromosome. Most are recessive traits Sex-Linked Traits
  • 28.
    EXAMPLES • baldness • hemophilia •muscular dystrophy • red-green color blindness Sex-Linked Traits red-green color blindness
  • 29.
    Color-blindness is recessive. B= normal b = colorblind Father is colorblind. His wife is not. Father’s genotype is _____ Mother’s genotype is _____ What is the likelihood of them having a colorblind son? Colorblind daughter? XbY XBXB
  • 30.
    • X-Linked Trait •blood does not clot properly • Any one of several mutations on genes for clotting factors • Treatment involves replacing defective clotting factor HEMOPHILIA