Kevin Hugins research paper.
Meriam-Webster defines endocrinology as “a branch of medicine concerned with the structure, function, and disorders of the endocrine glands.” When considering the human endocrine system, most people think of endocrine glands such as the hypothalamus, pituitary, gonads, adrenals, and pancreas. No one would deny that hormones released from endocrine glands have a powerful effect on cell function throughout the human body. A relatively new field of study called Microbial Endocrinology suggests that the interactions and effects of the human endocrine system involve more organisms than just the human.
Power Point for research paper presentation by Kevin Hugins.
Through microbial endocrinology other treatments may be developed. As this paper has discussed, application of these techniques may one day provide a treatment for pathogens other than the traditional antibiotics. It may lead to techniques for dealing with auto-immune diseases. Considering the sheer numbers of microorganisms in our microbiota and all we have yet to learn on the molecular level, this field of research may answer questions we do not even know we have yet.
Science Cabaret by Dr. Rodney Dietert "How to train your super organism..via ...Kitty Gifford
Attendees (and their microbes) at this event enjoyed a lively discussion on how we might better interact with our environment to support a healthier life for ourselves and our children. Think with your microbes about why we have to suffer from ever-increasing numbers of debilitating chronic diseases (asthma, food allergies, diabetes, autoimmune conditions, obesity, heart disease and cancer).
with Dr. Rodney Dietert, Cornell University Professor, Department of Microbiology and Immunology
Dr. Rodney Dietert is an internationally-known author, lecturer, scientist, book series editor, and educator. He is the author of Strategies for Protecting Your Child’s Immune System, and Science Sifting: Tools for Innovation in Science and Technology.
Power Point for research paper presentation by Kevin Hugins.
Through microbial endocrinology other treatments may be developed. As this paper has discussed, application of these techniques may one day provide a treatment for pathogens other than the traditional antibiotics. It may lead to techniques for dealing with auto-immune diseases. Considering the sheer numbers of microorganisms in our microbiota and all we have yet to learn on the molecular level, this field of research may answer questions we do not even know we have yet.
Science Cabaret by Dr. Rodney Dietert "How to train your super organism..via ...Kitty Gifford
Attendees (and their microbes) at this event enjoyed a lively discussion on how we might better interact with our environment to support a healthier life for ourselves and our children. Think with your microbes about why we have to suffer from ever-increasing numbers of debilitating chronic diseases (asthma, food allergies, diabetes, autoimmune conditions, obesity, heart disease and cancer).
with Dr. Rodney Dietert, Cornell University Professor, Department of Microbiology and Immunology
Dr. Rodney Dietert is an internationally-known author, lecturer, scientist, book series editor, and educator. He is the author of Strategies for Protecting Your Child’s Immune System, and Science Sifting: Tools for Innovation in Science and Technology.
Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - SourcesDrBonnie360
Exciting talk bringing Big Data and autoimmunity together at the Cambridge HealthTech Institute's Bio-IT World Conference and Expo. April 21-23, Boston.
Content and Visual Design by Tiffany Simms
The Gut-Brain Connection: An Inside Look at DepressionAugustin Bralley
During a recent Metametrix sponsored breakfast at the IFM Symposium in Hollywood, Florida, Dr. Todd LePine gave a compelling presentation entitled The Gut-Brain Connection: An Inside Look at Depression.
VHIR Seminar led by Joel Doré. Research Director. Institut National de la Recherche Agronomique (INRA). Jouy-en-Josas, France.
Abstract: The human intestinal tract harbours a complex microbial ecosystem which plays a key role in nutrition and health. Interactions between food constituents, microbes and the host organism derive from a long co-evolution that resulted in a mutualistic association.
Current investigations into the human faecal metagenome are delivering an extensive gene repertoire representative of functional potentials of the human intestinal microbiota. The most redundant genomic traits of the human intestinal microbiota are identified and thereby its functional balance. These observation point towards the existence of enterotypes, i.e. microbiota sharing specific traits but yet independent of geographic origin, age, sex etc.. It also shows a unique segregation of the human population into individuals with low versus high gene-counts. In the end, it not only gives an unprecedented view of the intestinal microbiota, but it also significantly expands our ability to look for specificities of the microbiota associated with human diseases and to ultimately validate microbial signatures of prognostic and diagnostic value in immune mediated diseases.
Metagenomics of the human intestinal tract was applied to specifically compare obese versus lean individuals as well as to explore the dynamic changes associated with a severe calory-restricted diet. Microbiota structure differs with body-mass index and a limited set of marker species may be used as diagnostic model with a >85% predictive value. Among obese subjects; the overall phenotypic characteristics are worse in individuals with low gene counts microbiota, including a worse evolution of morphometric parameters over a period of 10 years, a low grade inflammatory context also associated with insulin-resistance, and the worst response to dietary constraints in terms of weight loss or improvement of biological and inflammatory characteristics. Low gene count microbiota is also associated with less favourable conditions in inflammatory bowel disease, such as higher relapse rate in ulcerative colitis patients.
Finally, microbiota transplantation has seen a regain of interest with applications expanding from Clostridium difficile infections to immune mediated and metabolic diseases.
The human intestinal microbiota should hence be regarded as a true organ, amenable to rationally designed modulation for human health.
Food allergy has been long recognized and well documented. Other adverse reactions to foods first referred to as “toxic idiopathies” by John Freeman, co inventor of immunotherapy, at the early part of the 1900s can be mediated by and have their impact on the nervous and endocrine systems. It can also be mediated by pharmacologic mechanisms and can also affect any part of the body. There’s a great clinical need to accurately identify triggers of adverse reactivity as they have now been linked with even the most serious of modern maladies and diseases. In fact, inflammation is the hallmark of metabolic syndrome. Given the multitude of pathogenic mechanisms underlying adverse reactions to foods and other environmental exposures it is necessary that a utilizable and cost effective technology be understood so that its application be utilized under the appropriate circumstances.
KEY LEARNING POINTS
• The natural ability of certain foods to initiate an inflammatory response and induce metabolic disruptions and counterbalancing mechanisms to prevent that
• How foods can trigger “danger signals” for the immune system
Pharmacologic vs. immunologic reactions to foods
• Is there a common final pathway of all these mechanisms that can reliably indicate triggers of clinical pathology?
• Cellular testing vs. serologic testing: The advantages of cellular testing
The Human Microbiome in Sports Performance and Healthctorgan
Because our knowledge of the human microbiome is moving so rapidly, we turned our presentation at this conference into a discussion session so experts in the audience could share their professional knowledge and personal experience. By the end of the session, it was clear that we had barely scratched the surface of the importance of our microscopic kin to our health, to sports performance, and to how we need to think about designing research studies. A list of recommended resources is available at: www.caroltorgan.com/microbiome-sports/. We welcome your input!
Mapping the Human Gut Microbiome in Health and Disease Using Sequencing, Supe...Larry Smarr
Invited Talk Delivered by Mehrdad Yazdani, Calit2 Ayasdi Sponsored Lunch & Learn American Society of Human Genetics (ASHG) San Diego Convention Center October 19, 2014
Evolution in the news (BIOL415) Spring 2014Kevin B Hugins
Mini presentation on current news stories for BIOL 415
This news article was about a journal article published in Nature Communications on April 15, 2014. The article is the result of research that was led by scientists from the Max Planck Institute for Evolutionary Anthropology. The purpose of the research was to study the co-evolution of humans and gut microbiota and examine adaptation that resulted in groups that had different diets. The primary group of interest was a hunter-gatherer group located in Tanzania known as Hadza. This is one of the few remaining true foraging populations in the world. The Hadza diet consists of baobab, game meat, honey, berries and tubers. Hadza do not consume any agricultural crops or livestock.
World-wide data exchange in metabolomics, Wageningen, October 2016Christoph Steinbeck
Talk given at the Netherlands Institute of Ecology in Wageningen, where I describe the development of the MetaboLights database and the value of data sharing in Metabolomics and molecular Biology in General
Biological diversity, or biodiversity, is the scientific term for the variety and variability of life on Earth. Biodiversity is the key indicator of the health of an ecosystem. Every living thing, including man, is involved in these complex networks of interdependent relationships, which are called ecosystems.
Like all healthy ecosystems, Richness of microbiota species characterizes the GI microbiome in healthy individuals. Conversely, a loss in species diversity is a common finding in several disease states. Microbiota Biodiversity helps us : 1- Combat aggressions from other microorganisms, 2- Maintaining the wholeness of the intestinal mucosa. 3- Plays an important role in the immune system, 4- Performing a barrier effect.5- A healthy and balanced gut microbiota is key to ensuring proper digestive functioning. A gut out of balance means a body out of balance which means illness including Inflammation, Allergies, Infections, Nutrient deficiencies, Weight Gain, Asthma-allergies – Autoimmunity
• Arthritis, Metabolic Bone disease, Skin problems e.g. eczema, rosacia, Mood disorders - Cognitive decline-Alzheimers and Cancer.
Bacterial antibiotic resistance is a topic that is causing increasing concern in the health community. Antibiotics are a necessary drug to help protect and heal us from pathogenic infections that our immune system is unable to successfully combat on its own. However, bacteria are very adept at utilizing evolutionary processes to develop antibiotic resistance in order to promote their own survival, reproduction and persistence. The development of antibiotic resistant bacteria is occurring at an alarming rate. Researchers are investigating the mechanisms that confer resistance on bacteria. With techniques for genomic sequencing now readily available, understanding of genetic mechanisms of resistance and evolution as a whole has been advancing rapidly. Researchers have found that bacteria are very adept at gene mutation and horizontal gene transfer. New insights regarding pleiotrophy and epistasis have been provided through these techniques. A possible result of this research will be the discovery of new antibiotic therapies. However, as the research is demonstrating, even if we develop new antibiotics, bacteria will develop resistance to them. Thus, important considerations to be taken from the research include finding ways to slow the development of resistance as we will most likely never be able to stop it entirely.
Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - SourcesDrBonnie360
Exciting talk bringing Big Data and autoimmunity together at the Cambridge HealthTech Institute's Bio-IT World Conference and Expo. April 21-23, Boston.
Content and Visual Design by Tiffany Simms
The Gut-Brain Connection: An Inside Look at DepressionAugustin Bralley
During a recent Metametrix sponsored breakfast at the IFM Symposium in Hollywood, Florida, Dr. Todd LePine gave a compelling presentation entitled The Gut-Brain Connection: An Inside Look at Depression.
VHIR Seminar led by Joel Doré. Research Director. Institut National de la Recherche Agronomique (INRA). Jouy-en-Josas, France.
Abstract: The human intestinal tract harbours a complex microbial ecosystem which plays a key role in nutrition and health. Interactions between food constituents, microbes and the host organism derive from a long co-evolution that resulted in a mutualistic association.
Current investigations into the human faecal metagenome are delivering an extensive gene repertoire representative of functional potentials of the human intestinal microbiota. The most redundant genomic traits of the human intestinal microbiota are identified and thereby its functional balance. These observation point towards the existence of enterotypes, i.e. microbiota sharing specific traits but yet independent of geographic origin, age, sex etc.. It also shows a unique segregation of the human population into individuals with low versus high gene-counts. In the end, it not only gives an unprecedented view of the intestinal microbiota, but it also significantly expands our ability to look for specificities of the microbiota associated with human diseases and to ultimately validate microbial signatures of prognostic and diagnostic value in immune mediated diseases.
Metagenomics of the human intestinal tract was applied to specifically compare obese versus lean individuals as well as to explore the dynamic changes associated with a severe calory-restricted diet. Microbiota structure differs with body-mass index and a limited set of marker species may be used as diagnostic model with a >85% predictive value. Among obese subjects; the overall phenotypic characteristics are worse in individuals with low gene counts microbiota, including a worse evolution of morphometric parameters over a period of 10 years, a low grade inflammatory context also associated with insulin-resistance, and the worst response to dietary constraints in terms of weight loss or improvement of biological and inflammatory characteristics. Low gene count microbiota is also associated with less favourable conditions in inflammatory bowel disease, such as higher relapse rate in ulcerative colitis patients.
Finally, microbiota transplantation has seen a regain of interest with applications expanding from Clostridium difficile infections to immune mediated and metabolic diseases.
The human intestinal microbiota should hence be regarded as a true organ, amenable to rationally designed modulation for human health.
Food allergy has been long recognized and well documented. Other adverse reactions to foods first referred to as “toxic idiopathies” by John Freeman, co inventor of immunotherapy, at the early part of the 1900s can be mediated by and have their impact on the nervous and endocrine systems. It can also be mediated by pharmacologic mechanisms and can also affect any part of the body. There’s a great clinical need to accurately identify triggers of adverse reactivity as they have now been linked with even the most serious of modern maladies and diseases. In fact, inflammation is the hallmark of metabolic syndrome. Given the multitude of pathogenic mechanisms underlying adverse reactions to foods and other environmental exposures it is necessary that a utilizable and cost effective technology be understood so that its application be utilized under the appropriate circumstances.
KEY LEARNING POINTS
• The natural ability of certain foods to initiate an inflammatory response and induce metabolic disruptions and counterbalancing mechanisms to prevent that
• How foods can trigger “danger signals” for the immune system
Pharmacologic vs. immunologic reactions to foods
• Is there a common final pathway of all these mechanisms that can reliably indicate triggers of clinical pathology?
• Cellular testing vs. serologic testing: The advantages of cellular testing
The Human Microbiome in Sports Performance and Healthctorgan
Because our knowledge of the human microbiome is moving so rapidly, we turned our presentation at this conference into a discussion session so experts in the audience could share their professional knowledge and personal experience. By the end of the session, it was clear that we had barely scratched the surface of the importance of our microscopic kin to our health, to sports performance, and to how we need to think about designing research studies. A list of recommended resources is available at: www.caroltorgan.com/microbiome-sports/. We welcome your input!
Mapping the Human Gut Microbiome in Health and Disease Using Sequencing, Supe...Larry Smarr
Invited Talk Delivered by Mehrdad Yazdani, Calit2 Ayasdi Sponsored Lunch & Learn American Society of Human Genetics (ASHG) San Diego Convention Center October 19, 2014
Evolution in the news (BIOL415) Spring 2014Kevin B Hugins
Mini presentation on current news stories for BIOL 415
This news article was about a journal article published in Nature Communications on April 15, 2014. The article is the result of research that was led by scientists from the Max Planck Institute for Evolutionary Anthropology. The purpose of the research was to study the co-evolution of humans and gut microbiota and examine adaptation that resulted in groups that had different diets. The primary group of interest was a hunter-gatherer group located in Tanzania known as Hadza. This is one of the few remaining true foraging populations in the world. The Hadza diet consists of baobab, game meat, honey, berries and tubers. Hadza do not consume any agricultural crops or livestock.
World-wide data exchange in metabolomics, Wageningen, October 2016Christoph Steinbeck
Talk given at the Netherlands Institute of Ecology in Wageningen, where I describe the development of the MetaboLights database and the value of data sharing in Metabolomics and molecular Biology in General
Biological diversity, or biodiversity, is the scientific term for the variety and variability of life on Earth. Biodiversity is the key indicator of the health of an ecosystem. Every living thing, including man, is involved in these complex networks of interdependent relationships, which are called ecosystems.
Like all healthy ecosystems, Richness of microbiota species characterizes the GI microbiome in healthy individuals. Conversely, a loss in species diversity is a common finding in several disease states. Microbiota Biodiversity helps us : 1- Combat aggressions from other microorganisms, 2- Maintaining the wholeness of the intestinal mucosa. 3- Plays an important role in the immune system, 4- Performing a barrier effect.5- A healthy and balanced gut microbiota is key to ensuring proper digestive functioning. A gut out of balance means a body out of balance which means illness including Inflammation, Allergies, Infections, Nutrient deficiencies, Weight Gain, Asthma-allergies – Autoimmunity
• Arthritis, Metabolic Bone disease, Skin problems e.g. eczema, rosacia, Mood disorders - Cognitive decline-Alzheimers and Cancer.
Bacterial antibiotic resistance is a topic that is causing increasing concern in the health community. Antibiotics are a necessary drug to help protect and heal us from pathogenic infections that our immune system is unable to successfully combat on its own. However, bacteria are very adept at utilizing evolutionary processes to develop antibiotic resistance in order to promote their own survival, reproduction and persistence. The development of antibiotic resistant bacteria is occurring at an alarming rate. Researchers are investigating the mechanisms that confer resistance on bacteria. With techniques for genomic sequencing now readily available, understanding of genetic mechanisms of resistance and evolution as a whole has been advancing rapidly. Researchers have found that bacteria are very adept at gene mutation and horizontal gene transfer. New insights regarding pleiotrophy and epistasis have been provided through these techniques. A possible result of this research will be the discovery of new antibiotic therapies. However, as the research is demonstrating, even if we develop new antibiotics, bacteria will develop resistance to them. Thus, important considerations to be taken from the research include finding ways to slow the development of resistance as we will most likely never be able to stop it entirely.
Epigenetics, the microbiome and the environmentfathi neana
An epigenome consists of a record of the chemical changes to the DNA and histone proteins of an organism. These changes can be passed down to an organism's offspring via transgenerational epigenetic inheritance. Epigenetics, Gut microbiome and the Environment interplay like a vicious triad.
1- The epigenome is highly sensitive to external environment
2- The epigenome is highly sensitive to internal environment (Microbiome)
3- The microbiome (internal environment) is affected by the external environment
Care of the microbiome seems to be a personal issue but as it is affected by the external environment the issue must be global and a worldwide campaign have to be started.
The Human Microbiome Project (HMP) was a United States National Institutes of Health (NIH) research initiative to improve understanding of the microbial flora involved in human health and disease.
Evolution in the pathogenesis of periodontal diseaseDrAtulKoundel
Periodontal disease (PD) is one of the most common chronic inflammatory diseases affecting humans. It is of multi-factorial origin where host, environment and bacterial factors interplay to initiate immune-inflammatory response that causes most of the soft and hard tissue destruction
this is a review about evolution of antibiotic resistance. I tried to answer how bacteria acquire new genes to resist, how they choose, what are people doing to prevent this increasing resistance levels.
Environmental stimulus effect our health more than genetics. Epigentics is the control above the genes that determines why one person reacts one way while another person reacts differently to environmental stimulus.
From gut dysbiosis to altered brain function and mental illness: mechanisms a...BARRY STANLEY 2 fasd
Abstract
The human body hosts an enormous abundance and diversity of microbes, which perform a range of essential and beneficial functions. Our appreciation of the importance of these microbial communities to many aspects of human physiology has grown dramatically in recent years. We know, for example, that animals raised in a germ-free environment exhibit substantially altered immune and metabolic function, while the disruption of commensal microbiota in humans is associated with the development of a growing number of diseases. Evidence is now emerging that, through interactions with the gut– brain axis, the bidirectional communication system between the central nervous system and the gastrointestinal tract, the gut microbiome can also influence neural development, cognition and behaviour, with recent evidence that changes in behaviour alter gut microbiota composition, while modifications of the microbiome can induce depressive-like behaviours. Although an association between enteropathy and certain psychiatric conditions has long been recognized, it now appears that
gut microbes represent direct mediators of psychopathology. Here, we examine roles of gut microbiome in shaping brain development and neurological function, and the mechanisms by which it can contribute to mental illness. Further, we discuss how the insight provided by this new and exciting field of research can inform care and provide a basis for the design of novel, microbiota-targeted, therapies.
PSA Poster: Antibiotic Resistant GonorrheaKevin B Hugins
This project was done in BIOL 453, Immunology. The CDC has classified antibiotic resistant gonorrhea as an "urgent threat" in its 2013 antibiotic resistance threat report. Education for at risk groups is essential to slow the threat of this disease.
Evolution in the news: Power point presentation (BIOL415) Spring 2014Kevin B Hugins
Mini presentation on current news stories for BIOL 415
This news article was about a journal article published in Nature Communications on April 15, 2014. The article is the result of research that was led by scientists from the Max Planck Institute for Evolutionary Anthropology. The purpose of the research was to study the co-evolution of humans and gut microbiota and examine adaptation that resulted in groups that had different diets. The primary group of interest was a hunter-gatherer group located in Tanzania known as Hadza. This is one of the few remaining true foraging populations in the world. The Hadza diet consists of baobab, game meat, honey, berries and tubers. Hadza do not consume any agricultural crops or livestock.
Cathinone (power-point to accompany report) Kevin B Hugins
Cathinone is a naturally occurring monoamine alkaloid found in the leaves of the Catha edulis tree. The ingestion of cathinone causes stimulation and euphoria. Use of Catha edulis, or “khat” by man can be traced back to ancient Egypt. Current use of khat is primarily in Africa and the Middle East. Cathinone exerts its effects by mimicking monoamine neurotransmitters. An entire class of substituted cathinones has been synthesized. The effect and reasons for use of these can be medicinal, recreational, or detrimental. This paper will address the biology of Catha edulis, its history and use by humans, and the biological activity cathinone exerts upon them. Next it will explain the biosynthesis of cathinone within Catha edulis followed by the chemical synthesis of cathinone and substituted cathinones in the lab. Finally it will discuss some of the chemical applications and consequences of the use of substituted cathinones in recent years.
Cathinone history, synthesis, and human applicationsKevin B Hugins
Cathinone is a naturally occurring monoamine alkaloid found in the leaves of the Catha edulis tree. The ingestion of cathinone causes stimulation and euphoria. Use of Catha edulis, or “khat” by man can be traced back to ancient Egypt. Current use of khat is primarily in Africa and the Middle East. Cathinone exerts its effects by mimicking monoamine neurotransmitters. An entire class of substituted cathinones has been synthesized. The effect and reasons for use of these can be medicinal, recreational, or detrimental. This paper will address the biology of Catha edulis, its history and use by humans, and the biological activity cathinone exerts upon them. Next it will explain the biosynthesis of cathinone within Catha edulis followed by the chemical synthesis of cathinone and substituted cathinones in the lab. Finally it will discuss some of the chemical applications and consequences of the use of substituted cathinones in recent years.
Chimeric Antigen Receptors (paper with corresponding power point)Kevin B Hugins
Gene therapy was first conceptualized to alter debilitating fates of genetic diseases. Gene therapy technology can help introduce new functional DNA to replace mutated genes. The idea first arose in 1972 when Friedmann and Roblin authored a paper, “Gene therapy for human genetic disease?”, demonstrating that exogenous DNA can be taken up by mammalian cells (1). They proposed that the same procedure could be done on humans to correct genetic defects by introducing therapeutic DNA. Currently, genetic modification of T lymphocytes has been the major area of research for treating malignant tumors. This technique seeks to create chimeric antigen receptor (CAR) in T cells by genetically modifying them in vitro and reintroduce them back into blood circulation. The T cells are unique to every patient and the chimeric antigen receptors are unique to the tumor that it is targeting.
It is believed that HERVs are the result of ancient viral infections. A number of HERVs have maintained some functionality and still contain intact open reading frames (ORF’s) which code for fully functional proteins. HERV-W is one of these endogenous retroviruses. Over the last few years several research projects have suggested that HERV-W may be involved with multiple sclerosis, bipolar disorder, schizophrenia, autism, and various tumors. The presence of HERV-W RNAs, proteins, and virions has been detected in association with these diseases. This power point presentation was created to be used in conjunction with the associated paper.
It is believed that HERVs are the result of ancient viral infections. A number of HERVs have maintained some functionality and still contain intact open reading frames (ORF’s) which code for fully functional proteins. HERV-W is one of these endogenous retroviruses. Over the last few years several research projects have suggested that HERV-W may be involved with multiple sclerosis, bipolar disorder, schizophrenia, autism, and various tumors. The presence of HERV-W RNAs, proteins, and virions has been detected in association with these diseases.
Final presentation for BIOL405, NSC, Spring 2014. Presented by Kevin Hugins and Duy-Khiem Chanh Pham. This presentation addressed the use of Chimeric Antigen Receptors for gene therapy for cancer. Gene therapy was first conceptualized to alter debilitating fates of genetic diseases. Gene therapy technology can help introduce new functional DNA to replace mutated genes. The idea first arose in 1972 when Friedmann and Roblin authored a paper, “Gene therapy for human genetic disease?”, demonstrating that exogenous DNA can be taken up by mammalian cells (1). They proposed that the same procedure could be done on humans to correct genetic defects by introducing therapeutic DNA. Currently, genetic modification of T lymphocytes has been the major area of research for treating malignant tumors. This technique seeks to create chimeric antigen receptor (CAR) in T cells by genetically modifying them in vitro and reintroduce them back into blood circulation. The T cells are unique to every patient and the chimeric antigen receptors are unique to the tumor that it is targeting.
- Video recording of this lecture in English language: https://youtu.be/lK81BzxMqdo
- Video recording of this lecture in Arabic language: https://youtu.be/Ve4P0COk9OI
- Link to download the book free: https://nephrotube.blogspot.com/p/nephrotube-nephrology-books.html
- Link to NephroTube website: www.NephroTube.com
- Link to NephroTube social media accounts: https://nephrotube.blogspot.com/p/join-nephrotube-on-social-media.html
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MANAGEMENT OF ATRIOVENTRICULAR CONDUCTION BLOCK.pdfJim Jacob Roy
Cardiac conduction defects can occur due to various causes.
Atrioventricular conduction blocks ( AV blocks ) are classified into 3 types.
This document describes the acute management of AV block.
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Flu Vaccine Alert in Bangalore Karnatakaaddon Scans
As flu season approaches, health officials in Bangalore, Karnataka, are urging residents to get their flu vaccinations. The seasonal flu, while common, can lead to severe health complications, particularly for vulnerable populations such as young children, the elderly, and those with underlying health conditions.
Dr. Vidisha Kumari, a leading epidemiologist in Bangalore, emphasizes the importance of getting vaccinated. "The flu vaccine is our best defense against the influenza virus. It not only protects individuals but also helps prevent the spread of the virus in our communities," he says.
This year, the flu season is expected to coincide with a potential increase in other respiratory illnesses. The Karnataka Health Department has launched an awareness campaign highlighting the significance of flu vaccinations. They have set up multiple vaccination centers across Bangalore, making it convenient for residents to receive their shots.
To encourage widespread vaccination, the government is also collaborating with local schools, workplaces, and community centers to facilitate vaccination drives. Special attention is being given to ensuring that the vaccine is accessible to all, including marginalized communities who may have limited access to healthcare.
Residents are reminded that the flu vaccine is safe and effective. Common side effects are mild and may include soreness at the injection site, mild fever, or muscle aches. These side effects are generally short-lived and far less severe than the flu itself.
Healthcare providers are also stressing the importance of continuing COVID-19 precautions. Wearing masks, practicing good hand hygiene, and maintaining social distancing are still crucial, especially in crowded places.
Protect yourself and your loved ones by getting vaccinated. Together, we can help keep Bangalore healthy and safe this flu season. For more information on vaccination centers and schedules, residents can visit the Karnataka Health Department’s official website or follow their social media pages.
Stay informed, stay safe, and get your flu shot today!
Title: Sense of Taste
Presenter: Dr. Faiza, Assistant Professor of Physiology
Qualifications:
MBBS (Best Graduate, AIMC Lahore)
FCPS Physiology
ICMT, CHPE, DHPE (STMU)
MPH (GC University, Faisalabad)
MBA (Virtual University of Pakistan)
Learning Objectives:
Describe the structure and function of taste buds.
Describe the relationship between the taste threshold and taste index of common substances.
Explain the chemical basis and signal transduction of taste perception for each type of primary taste sensation.
Recognize different abnormalities of taste perception and their causes.
Key Topics:
Significance of Taste Sensation:
Differentiation between pleasant and harmful food
Influence on behavior
Selection of food based on metabolic needs
Receptors of Taste:
Taste buds on the tongue
Influence of sense of smell, texture of food, and pain stimulation (e.g., by pepper)
Primary and Secondary Taste Sensations:
Primary taste sensations: Sweet, Sour, Salty, Bitter, Umami
Chemical basis and signal transduction mechanisms for each taste
Taste Threshold and Index:
Taste threshold values for Sweet (sucrose), Salty (NaCl), Sour (HCl), and Bitter (Quinine)
Taste index relationship: Inversely proportional to taste threshold
Taste Blindness:
Inability to taste certain substances, particularly thiourea compounds
Example: Phenylthiocarbamide
Structure and Function of Taste Buds:
Composition: Epithelial cells, Sustentacular/Supporting cells, Taste cells, Basal cells
Features: Taste pores, Taste hairs/microvilli, and Taste nerve fibers
Location of Taste Buds:
Found in papillae of the tongue (Fungiform, Circumvallate, Foliate)
Also present on the palate, tonsillar pillars, epiglottis, and proximal esophagus
Mechanism of Taste Stimulation:
Interaction of taste substances with receptors on microvilli
Signal transduction pathways for Umami, Sweet, Bitter, Sour, and Salty tastes
Taste Sensitivity and Adaptation:
Decrease in sensitivity with age
Rapid adaptation of taste sensation
Role of Saliva in Taste:
Dissolution of tastants to reach receptors
Washing away the stimulus
Taste Preferences and Aversions:
Mechanisms behind taste preference and aversion
Influence of receptors and neural pathways
Impact of Sensory Nerve Damage:
Degeneration of taste buds if the sensory nerve fiber is cut
Abnormalities of Taste Detection:
Conditions: Ageusia, Hypogeusia, Dysgeusia (parageusia)
Causes: Nerve damage, neurological disorders, infections, poor oral hygiene, adverse drug effects, deficiencies, aging, tobacco use, altered neurotransmitter levels
Neurotransmitters and Taste Threshold:
Effects of serotonin (5-HT) and norepinephrine (NE) on taste sensitivity
Supertasters:
25% of the population with heightened sensitivity to taste, especially bitterness
Increased number of fungiform papillae
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NYSORA Guideline
2 Case Reports of Gastric Ultrasound
These lecture slides, by Dr Sidra Arshad, offer a quick overview of physiological basis of a normal electrocardiogram.
Learning objectives:
1. Define an electrocardiogram (ECG) and electrocardiography
2. Describe how dipoles generated by the heart produce the waveforms of the ECG
3. Describe the components of a normal electrocardiogram of a typical bipolar leads (limb II)
4. Differentiate between intervals and segments
5. Enlist some common indications for obtaining an ECG
Study Resources:
1. Chapter 11, Guyton and Hall Textbook of Medical Physiology, 14th edition
2. Chapter 9, Human Physiology - From Cells to Systems, Lauralee Sherwood, 9th edition
3. Chapter 29, Ganong’s Review of Medical Physiology, 26th edition
4. Electrocardiogram, StatPearls - https://www.ncbi.nlm.nih.gov/books/NBK549803/
5. ECG in Medical Practice by ABM Abdullah, 4th edition
6. ECG Basics, http://www.nataliescasebook.com/tag/e-c-g-basics
Lung Cancer: Artificial Intelligence, Synergetics, Complex System Analysis, S...Oleg Kshivets
RESULTS: Overall life span (LS) was 2252.1±1742.5 days and cumulative 5-year survival (5YS) reached 73.2%, 10 years – 64.8%, 20 years – 42.5%. 513 LCP lived more than 5 years (LS=3124.6±1525.6 days), 148 LCP – more than 10 years (LS=5054.4±1504.1 days).199 LCP died because of LC (LS=562.7±374.5 days). 5YS of LCP after bi/lobectomies was significantly superior in comparison with LCP after pneumonectomies (78.1% vs.63.7%, P=0.00001 by log-rank test). AT significantly improved 5YS (66.3% vs. 34.8%) (P=0.00000 by log-rank test) only for LCP with N1-2. Cox modeling displayed that 5YS of LCP significantly depended on: phase transition (PT) early-invasive LC in terms of synergetics, PT N0—N12, cell ratio factors (ratio between cancer cells- CC and blood cells subpopulations), G1-3, histology, glucose, AT, blood cell circuit, prothrombin index, heparin tolerance, recalcification time (P=0.000-0.038). Neural networks, genetic algorithm selection and bootstrap simulation revealed relationships between 5YS and PT early-invasive LC (rank=1), PT N0—N12 (rank=2), thrombocytes/CC (3), erythrocytes/CC (4), eosinophils/CC (5), healthy cells/CC (6), lymphocytes/CC (7), segmented neutrophils/CC (8), stick neutrophils/CC (9), monocytes/CC (10); leucocytes/CC (11). Correct prediction of 5YS was 100% by neural networks computing (area under ROC curve=1.0; error=0.0).
CONCLUSIONS: 5YS of LCP after radical procedures significantly depended on: 1) PT early-invasive cancer; 2) PT N0--N12; 3) cell ratio factors; 4) blood cell circuit; 5) biochemical factors; 6) hemostasis system; 7) AT; 8) LC characteristics; 9) LC cell dynamics; 10) surgery type: lobectomy/pneumonectomy; 11) anthropometric data. Optimal diagnosis and treatment strategies for LC are: 1) screening and early detection of LC; 2) availability of experienced thoracic surgeons because of complexity of radical procedures; 3) aggressive en block surgery and adequate lymph node dissection for completeness; 4) precise prediction; 5) adjuvant chemoimmunoradiotherapy for LCP with unfavorable prognosis.
2. Hugins1
Abstract
In choosing a topic for this paper I first typed “endocrinology research paper topics” into
Google. As I browsed the topics, there was nothing that really excited me. Trying to brainstorm,
I asked myself what really interested me. Most of the research papers I have written have been
related to topics about viruses or bacteria. Pathogenic microorganisms seem to be the common
theme for me. The topics that have always caught my attention in classes have been about tiny
little critters that do amazingly big things. On a whim I changed my search to “endocrinology
and bacteria.” To my surprise I learned that there is something known as “Microbial
Endocrinology.” Microbial Endocrinology is defined as the study of the ability of
microorganisms to both produce and recognize neurochemicals that originate either within the
microorganisms themselves or within the host they inhabit. It seeks to understand how hosts and
microorganisms interact, leading to either health or disease. I knew I could count on those little
buggers. They seem to have their cilia in everything.
3. Hugins2
Meriam-Webster defines endocrinology as “a branch of medicine concerned with the
structure, function, and disorders of the endocrine glands.” When considering the human
endocrine system, most people think of endocrine glands such as the hypothalamus, pituitary,
gonads, adrenals, and pancreas. No one would deny that hormones released from endocrine
glands have a powerful effect on cell function throughout the human body. A relatively new
field of study called Microbial Endocrinology suggests that the interactions and effects of the
human endocrine system involve more organisms than just the human. Just over 20 years ago,
Mark Lyte gave a presentation at the 1992 American Society for Microbiology General Meeting
suggesting that bacteria recognize human stress hormones and can alter their behavior
accordingly. Two people attended Lyte’s presentation that day. Fifteen years later, at the 2007
ASM General Meeting, the auditorium was filled for Lyte’s presentation on the same topic (Lyte
2009). As research into this area has expanded, scientists have demonstrated that microbes can
not only just detect hormone signals from its human host, but can in some instances also send out
signals that human hormone receptors can detect and respond to as if the signals were from the
human’s own system. Researchers have found that some microorganisms can produce
neuroendocrine hormones such as GABA, serotonin, acetylcholine, catecholamines and
melatonin (Wang 2013). The interdisciplinary approach of Microbial Endocrinology now
combines the study of microbiology, neurobiology, and endocrinology. This area of study looks
at the ways microbes and their hosts interact and how those interactions can contribute to health
or disease.
Scientists have been aware that other living organisms contain hormones that we would
consider to be human. Some insects and protozoa, as well as plants such as potatoes, tomatoes,
and bananas contain the neuroendocrine hormones dopamine and norepinephrine. As research
4. Hugins3
methods became more advanced researchers recognized that microbes are able to interact with
their host in ways that are non-infectious, non-immune mediated. It is thought that interactions
can also involve hormone mediated signaling between the microbe and host. Considering the
size of the human microbiome this ability of interspecies signaling can have significant
ramifications.
The whole of the bacterial populations that are on or in a human is called the microbiota.
Currently, the most commonly suggested ratio between human cells and the bacterial cells that
are on and in the human is 10:1. For every cell that makes up our body, there are 10 bacterial
cells that are living on or in us. The majority of these bacteria reside in the gastrointestinal tract.
They are involved in processes that are vital for humans to maintain good health. These bacteria
have evolved a symbiotic relationship with humans and are involved in tasks such as aiding
digestion, synthesizing critical nutrients such as vitamins K and D, and preventing pathogenic
microorganisms from colonizing in our gut. It has been shown that anxiety and stress can affect
the microbiota within the human gut (Wang 2013). Studies in the 1990’s demonstrated that
neuroendocrine hormones could alter virulence of bacteria and stimulate growth (Lyte 2013).
Many of the gut bacteria are recognized as being hormone responsive. These include
Escherichia coli, Salmonella, Listeria, Campylobacter, and Yersinia (Sharaff 2011). Some
microorganisms that are responsible for respiratory infection have their growth stimulated by
stress hormones. Pseudomonas aeruginosa, Bordetella pertussis, Klebsiella pneumonia, and
Bordetella bronchiseptica all experience exponential cell growth when exposed to
catchecholamines.
Some fungi, protozoa and bacteria have insulin-like receptors and molecules on their cell
surface. Bacteria such as Burkholderia cepacia, B. pseudomallei, and some species of
5. Hugins4
Streptococcus have a large number of insulin binding proteins. If an immune response is
mounted to battle one of these bacteria it may result in the host developing insulin dependent
diabetes. If during the process of battling the infection, host immune cells interact with the
insulin-like epitopes on the bacteria, the resulting antigen receptors may then also end up
targeting human insulin receptor proteins. Autoimmunity ensues, resulting in Type I Diabetes
(Nisr 2012). In their study of insulin binding of 45 different microbial species, Nisr et al. found
that Aeromonas salmonicida, Burkholderia cenocepacia, and Burkholderia multivorans all
showed a high affinity for insulin. It is their conclusion that infections by these microorganisms
may contribute to an autoimmune response that leads to the development of insulin dependent
diabetes.
Sex steroids also have interactions with bacterial receptors. When they are in a host,
accelerated growth and antibiotic insensitivity can result from exposure to steroid hormones and
glucocorticoids (Plotkin 2003). In their study, Plotkin et al. found that increasing exposure to
testosterone and dihydrotestosterone (DHT) caused considerable acceleration in cell division in
E. coli. As levels of the corticosteroid dexamethasone were increased in S. aureus and E.
faecalis, the speed of cell division was significantly increased. When exposed to testosterone
and DHT, Pseudomonas aeruginosa demonstrated up to an eight fold increase in resistance to
the antimicrobial agent Cefepime. Enterococcus faecalis insensitivity to Meropenem resulted
from testosterone and resistance to Norfloxacin was shown as a result of exposure to DHT.
Due to hormonal differences, the gut microbiota of males and females has different
microorganisms and show different responses to stressors. This difference is influenced by
androgens. The microbiota between sexes stays relatively the same from birth until puberty. As
hormonal levels change during puberty, the gut microbiota changes between the sexes. This
6. Hugins5
development can be reversed however with castration. Upon castration, the male stops
producing the androgens that affect the microbiota and the changes in his microbiota reverse and
become more like a female again (Yurkovetskiy 2013). By sequencing 16S rRNA genes of gut
microbiota of mice, Yurkovetskiy et al. found that prepubescent males and females have similar
microbiota. After puberty, the adult female microbiota remained fairly similar to that of the
juveniles but the male’s became significantly less diverse. If the male was then castrated, his
microbiome changed again and became more like that of the juveniles and females.
A study by Markle et al. (2013), demonstrated a correlation between testosterone levels
and certain microbe associated auto immune diseases. Noting that there was a strong female bias
toward some autoimmune diseases, Markle set out to see if it was hormonally related. In some
autoimmune diseases such as multiple sclerosis and rheumatoid arthritis, women are more
commonly afflicted then men at younger ages. This gap begins to close as the men reach an
older age and testosterone production declines. Markle studied non-obese diabetic mice that had
insulin dependent diabetes. This autoimmune disease is more prevalent in females than males.
Markle found that castration of male mice led to increased incidence of non-obese type-1
diabetes. If females were treated with androgen, their incidence of the disease decreased (Markle
2013).
As researchers gain deeper understanding of microbial endocrinology and the
relationships between humans and their microbiota, new strategies for maintaining health and
fighting disease will be developed. One example of real world application of microbial
endocrinology can be found regarding coagulase-negative staphylococci (CoNS). CoNS is
present on our skin. It typically shows low pathogenicity. However, CoNS infections are
common in intensive care patients. CoNS biofilms form on intravenous catheters of the patients.
7. Hugins6
Catecholamines have an exponential effect on the development of staphylococcal biofilms. The
effect is so strong that staphylococci that appear dead due to antibiotics can recover when
exposed to catecholamines. In medical settings, catecholamines are administered to patients
through intravenous catheters (Sharaff 2011). These persistent infections were actually being
caused by the heath care that was administered to the patient.
Through microbial endocrinology other treatments may be developed. As this paper has
discussed, application of these techniques may one day provide a treatment for pathogens other
than the traditional antibiotics. It may lead to techniques for dealing with auto-immune diseases.
Considering the sheer numbers of microorganisms in our microbiota and all we have yet to learn
on the molecular level, this field of research may answer questions we do not even know we
have yet. In conclusion, the next time you hear a researcher’s novel idea that seems a little bit
odd; remember Mark Lyte and the ASM General Meeting of 1992. You might just want to buy a
little stock in the company. You might be hearing the next new big idea.
8. Hugins7
References
Chung, S., Liu, S., Lin, H., & Wang, L. (2014). Increased Risk of Pneumonia in Patients
Receiving Gonadotropin-Releasing Hormone Agonists for Prostate Cancer. PLoS One,
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4(4), 169-175. Retrieved from
http://www.microbemagazine.org/index.php?option=com_content&view=article&id=
281:microbial-endocrinology-comes-of-age&Itemid=263
Lyte, M. (2013). Microbial Endocrinology in the Microbiome-Gut-Brain Axis: How Bacterial
Production and Utilization of Neurochemicals Influence Behavior (V. Miller, Ed.).
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Nisr, R. B., Moody, A. J., & Gilpin, M. L. (2012). Screening microorganisms for insulin binding
reveals binding by Burkholderia multivorans and Burkholderia cenocepacia and novel
attachment of insulin to Aeromonas salmonicida via the A-layer. FEMS Microbiology
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Plotkin, B. J., Roose, R. J., Erikson, Q., & Viselli, S. M. (2003). Effect of Androgens and
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Wang, Y., & Kasper, L. H. (2013). The role of microbiome in central nervous system disorders.
Brain, Behavior, and Immunity, 38, 1-12. doi: 10.1016/j.bbi.2013.12.015
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