Glyco- & lipo- proteins structure & function
1
By
KAUSHAL KUMAR SAHU
Assistant Professor (Ad Hoc)
Department of Biotechnology
Govt. Digvijay Autonomous P. G. College
Raj-Nandgaon ( C. G. )
SYNOPSIS for Glycoproteins
• INTRODUCTION
• DEFINITION
• STRUCTURE
• TYPES OF BONDS
• N-LINKED GLYCOSYLATION
• O-LINKED GLYCOSYLATION
• AMOUNT OF CARBOHYDRATES PRESENT IN GLYCOPROTEIN
• BIOLOGICAL SIGNIFICANCE AND
• FUNCTION
• BIOLOGICAL ADVANTAGE OF ADDING OLIGOSACCHARIDES TO PROTEIN
INTRODUCTION
Glycoprotein have been defined as conjugated proteins
which contains one or more saccharides lacking a serial repeat
unit and are bound covalently to a protein.
Glycoproteins are resultant from the covalent attachment
of carbohydrate chains both linear and branched in structure to
various sites on the polypeptide backbone of a protein.
Glycoproteins are conjugated proteins which are
biologically active molecules. In Glycoprotein the prosthetic part
is carbohydrate.
DEFINITION OF GLYCOPROTEIN
Glycoprotein's are proteins with covalent or non covalent
attachment of carbohydrates with variable carbohydrate content.
STRUCTURE
• Covalent linkage of a sugar to the proteins is a central part of
Glycoprotein structure.
• Among the several different classes of conjugated proteins
Glycoprotein's are one of them which represent a large group
of conjugated proteins with their biological significance.
• Carbohydrates are linked to proteins by N or O – linkage or N
– or O – glycosyl bonds.
1. N - Glycosyl linkage to asparagine.
2. O – Glycosyl linkage to serine.
 N-linked glycosylation is important for the folding of some
eukaryotic proteins.
•The N-linked glycosylation process occurs in eukaryotes and
widely in archaea, but very rarely in bacteria.
• For N-linked oligosaccharides, a 14-sugar precursor is first
added to the asparagines in the polypeptide chain of the target
protein.
•The structure of this precursor is common to most eukaryotes,
and contains 3 glucose, 9 mannose, and 2 N-acetylglucosamine
molecules.
N-linked Glycosylation
 O-linked glycosylation occurs at a later stage during protein
processing, probably in the Golgi apparatus.
• This is the addition of N-acetyl-galactosamine to serine or threonine
residues by the enzyme UDP-N-acetyl-D- galactosamine:polypeptide N-
acetyl galactosaminyl transferase followed by other carbohydrates (such
as galactose and sialic acid).
• This process is important for certain types of proteins such as
proteoglycans, which involves the addition of glycosaminoglycan chains
to an initially unglycosylated "proteoglycan core protein."
O-linked Glycosylation
Structure of O-linked glycosylation
Amount of carbohydrates in glycoprotein
Glycoprotein Amount of
carbohydrate
1. IgG
2. Glycophorin
3. Human ovarian cyst
4. Human gastric
glycoprotein
5. FSH
6. LH
7. TSH
8. Chorionic gonadotropin
4%
60%
70%
82%
18.2%
15.7%
16.2%
31%
BIOLOGICAL SIGNIFICANCE
• Glycoproteins in cell membranes may have an important role in the behavior
of cell and especially in the biological function of the membrane.
• Glycoproteins are constituents of the mucus secreted by certain epithelial
cells, where they mediate lubrication and protection of tissues lining the
respiratory, gastrointestinal and female reproductive system.
• Many secreted protiens are glycoproteins and they also includes
a) Hormones :- FSH, LH, TSH, chorionic gonadotropin.
b) Plasma proteins:- Orosomucoids, ceruloplasmin, plasminogen,
prothrombin and immunoglobulins.
FUTNCION
• The role of carbohydrates in glycoprotein structure/function
seems to involve their role in directing proper folding of proteins
in the ER .
•In cell membrane they help to stabilise the membrane structure
as they forms hydrogen bonds with water molecules in the fluid
surrounding the cell.
•The most important function of glycoprotein in animal cell is to
increase the strength and impermeability of the outer bilipid
layer.
•Defence against infection:- IgG, interferon.
Synopsis for Lipoproteins
• INTRODUCTION
• DEFINITION
• TYPES OF LIPOPROTEINS
• COMPOSITION OF LIPOOPROTEIN
• TRANSPORT OF LIPOPROTEIN INSIDE THE CELL
• TRANSPORT OF LIPOPROTEIN IN HUMAN BODY
• BIOLOGICAL ADVANTAGE OF ADDING LIPIDS TO PROTEIN /
FUNCTIONS OF LIPOPROTEINS
• CONCLUSION
• REFERENCES
• What are lipoproteins and why do we need them?
– Lipoproteins are a handful of different molecules that interact
with water insoluble fat molecules, and transports those fats in
the plasma.
– Different lipoproteins are responsible for the transportation of
different fats.
– Lipoproteins allow fat to be dissolved into the plasma.
– Function: Transport of fat soluble substances
14
DEFINITION OF LIPOPROTEIN
Lipoproteins are molecules made up of proteins and fat.
• There are 4 types of lipoproteins
– Chylomicrons
• Transport of dietary triglycerides from the GI tract to the liver
– Very Low Density Lipoproteins ( VLDL )
• Transport of triglycerides from the liver to tissues for storage and
energy
– Low Density Lipoproteins ( LDL )
• Transports cholesterol to peripheral tissues
– High Density Lipoproteins ( HDL )
• Transports cholesterol away from the peripheral tissues to the liver
16
• Lipid Chemistry
– Lipids include
• Cholesterol
• Triglycerides
• Phospholipids
• Glycolipids
– Lipids are important components of cell membranes
17
– Fatty acids are short to long carbon chained molecules
• Saturated fatty acids
– No double bonds between carbons ( C – C )
– Solid at room temperature
– Animal sources
• Unsaturated fatty acids
– Double bonds between carbon bonds ( C = C)
– Usually liquid at room temp
– Plant sources
18
• Triglycerides
– Glycerol with 3 attached fatty acids.
– 95 % of body fat is triglycerides.
– Energy source when plasma glucose is decreased.
– Triglycerides transported by Chylomicrons (exogeneous) and VLDL
(endogenous).
19
• Cholesterol
– Found only in animals.
– Important component of membranes, steroid hormones, bile and
Vitamin D.
– Exogeneous cholesterol comes from diet.
– Endogeneous cholesterol is synthesized by the liver.
– 70 % of cholesterol associated with cellular components.
– 30 % is in the plasma ( ⅓ free form , ⅔ esterfied )
– Transported by HDL and LDL
20
• Apolipoproteins
– Outer protein “shell” of the lipoprotein molecule.
– The protein – lipid interaction allows the water insoluble lipid to
become soluble in plasma.
– The apolipoprotein is responsible for the interactions with cell
membranes and enzymes to transport lipids to specific locations.
21
• Lipoproteins
– Classified according to density and electrophoresis migration.
– Lipoproteins differ in their sizes, weights, chemical composition,
etc.
– There are four main types of lipoproteins
• CHYLOMICRONS
• VLDL
• LDL
• HDL
22
• Chylomicrons
– Transports exogeneous ( dietary ) triglycerides.
– 90 - 95 % by weight is triglycerides.
– Absent from fasting plasma.
– Inadequate clearance produces a creamy layer on the plasma.
• VLDL ( Very Low Density Lipoproteins )
– Transports endogenous triglycerides from liver to tissues.
– 50 - 65 % by weight is triglycerides.
– Excess dietary carbohydrates are converted to triglycerides by the liver.
– Once VLDL looses much of its TG’s it becomes LDL
23
• LDL ( Low Density Lipoproteins )
– Transports cholesterol from liver to the tissues.
– Synthesized in the liver.
– Approximately 50 % by weight cholesterol.
– Most atherogenic lipoprotein … “ Bad Cholesterol“.
• HDL ( High Density Lipoprotein )
– Transports excess cholesterol from the tissues back to the liver (
reverse transport ).
– Synthesized in the liver and intestines.
– Composition:
• 30% PHOSPHOLIPIDS
• 20% CHOLESTEROL
• 50% APOPROTEIN
– The “good “ cholesterol. 24
Lipoprotein
class
Density
(g/mL)
Diameter
(nm)
Protein %
of dry wt
Phosphol
ipid %
Triacylglycerol
% of dry wt
HDL 1.063-1.21 5 – 15 33 29 8
LDL 1.019 –
1.063
18 – 28 25 21 4
IDL 1.006-1.019 25 - 50 18 22 31
VLDL 0.95 – 1.006 30 - 80 10 18 50
chylomicrons < 0.95 100 - 500 1 - 2 7 84
Composition and properties of human
lipoproteins
Lipoprotein structure
•After the clathrin coat
disassembles, the vesicle fuses
with an endosome.
•LDL is released from the
receptor within the acidic
environment of the endosome,
and the receptor is returned to
the plasma membrane.
•After LDL is transferred to a
lysosome, cholesterol is
released & may be used, e.g., for
• Cells take up LDL by receptor-
mediated endocytosis, involving
formation of a clathrin-coated pit
& pinching off of a vesicle
incorporating the receptor & LDL
cargo.
LDL
extracellular space
LDL
receptor
receptor-mediated
endocytosis
cytosol
Receptor Mediated Endocytosis -
•The lipoprotein allows fats to move through the water inside and outside cells
•Lipoprotein carry cholestrol & similar substance through the blood.
•The handling of lipoprotein particles in the body is reffered to as lipoprotein
particle metabolism.
FUNCTION
CONCLUSION
Glycoprotein are important glycoconjugates. They are covalently attach
to carbohydrates. They are found on the outer face of the plasma
membrane, in the extra cellular matrix and in the blood.
Glycoprotein has various biological advantages and their study is very
important in AIDS,INFLUENZA and other diseases.
Lipoproteins are also important lipoconjugates, which are helpful in the
transportation of Lipid molecules in the inside the human body.
REFERENCE
1. TEXT BOOK OF BIOCHEMISTRY
LEHNINGER NELSON & COX (iv EDITION)
2. TEXT BOOK OF BIOCHEMISTRY
WILSON & WALKER

Glycoprotein, lipoprotein, structure and function

  • 1.
    Glyco- & lipo-proteins structure & function 1 By KAUSHAL KUMAR SAHU Assistant Professor (Ad Hoc) Department of Biotechnology Govt. Digvijay Autonomous P. G. College Raj-Nandgaon ( C. G. )
  • 2.
    SYNOPSIS for Glycoproteins •INTRODUCTION • DEFINITION • STRUCTURE • TYPES OF BONDS • N-LINKED GLYCOSYLATION • O-LINKED GLYCOSYLATION • AMOUNT OF CARBOHYDRATES PRESENT IN GLYCOPROTEIN • BIOLOGICAL SIGNIFICANCE AND • FUNCTION • BIOLOGICAL ADVANTAGE OF ADDING OLIGOSACCHARIDES TO PROTEIN
  • 3.
    INTRODUCTION Glycoprotein have beendefined as conjugated proteins which contains one or more saccharides lacking a serial repeat unit and are bound covalently to a protein. Glycoproteins are resultant from the covalent attachment of carbohydrate chains both linear and branched in structure to various sites on the polypeptide backbone of a protein. Glycoproteins are conjugated proteins which are biologically active molecules. In Glycoprotein the prosthetic part is carbohydrate.
  • 4.
    DEFINITION OF GLYCOPROTEIN Glycoprotein'sare proteins with covalent or non covalent attachment of carbohydrates with variable carbohydrate content.
  • 5.
    STRUCTURE • Covalent linkageof a sugar to the proteins is a central part of Glycoprotein structure. • Among the several different classes of conjugated proteins Glycoprotein's are one of them which represent a large group of conjugated proteins with their biological significance. • Carbohydrates are linked to proteins by N or O – linkage or N – or O – glycosyl bonds. 1. N - Glycosyl linkage to asparagine. 2. O – Glycosyl linkage to serine.
  • 7.
     N-linked glycosylationis important for the folding of some eukaryotic proteins. •The N-linked glycosylation process occurs in eukaryotes and widely in archaea, but very rarely in bacteria. • For N-linked oligosaccharides, a 14-sugar precursor is first added to the asparagines in the polypeptide chain of the target protein. •The structure of this precursor is common to most eukaryotes, and contains 3 glucose, 9 mannose, and 2 N-acetylglucosamine molecules. N-linked Glycosylation
  • 8.
     O-linked glycosylationoccurs at a later stage during protein processing, probably in the Golgi apparatus. • This is the addition of N-acetyl-galactosamine to serine or threonine residues by the enzyme UDP-N-acetyl-D- galactosamine:polypeptide N- acetyl galactosaminyl transferase followed by other carbohydrates (such as galactose and sialic acid). • This process is important for certain types of proteins such as proteoglycans, which involves the addition of glycosaminoglycan chains to an initially unglycosylated "proteoglycan core protein." O-linked Glycosylation
  • 9.
    Structure of O-linkedglycosylation
  • 10.
    Amount of carbohydratesin glycoprotein Glycoprotein Amount of carbohydrate 1. IgG 2. Glycophorin 3. Human ovarian cyst 4. Human gastric glycoprotein 5. FSH 6. LH 7. TSH 8. Chorionic gonadotropin 4% 60% 70% 82% 18.2% 15.7% 16.2% 31%
  • 11.
    BIOLOGICAL SIGNIFICANCE • Glycoproteinsin cell membranes may have an important role in the behavior of cell and especially in the biological function of the membrane. • Glycoproteins are constituents of the mucus secreted by certain epithelial cells, where they mediate lubrication and protection of tissues lining the respiratory, gastrointestinal and female reproductive system. • Many secreted protiens are glycoproteins and they also includes a) Hormones :- FSH, LH, TSH, chorionic gonadotropin. b) Plasma proteins:- Orosomucoids, ceruloplasmin, plasminogen, prothrombin and immunoglobulins.
  • 12.
    FUTNCION • The roleof carbohydrates in glycoprotein structure/function seems to involve their role in directing proper folding of proteins in the ER . •In cell membrane they help to stabilise the membrane structure as they forms hydrogen bonds with water molecules in the fluid surrounding the cell. •The most important function of glycoprotein in animal cell is to increase the strength and impermeability of the outer bilipid layer. •Defence against infection:- IgG, interferon.
  • 13.
    Synopsis for Lipoproteins •INTRODUCTION • DEFINITION • TYPES OF LIPOPROTEINS • COMPOSITION OF LIPOOPROTEIN • TRANSPORT OF LIPOPROTEIN INSIDE THE CELL • TRANSPORT OF LIPOPROTEIN IN HUMAN BODY • BIOLOGICAL ADVANTAGE OF ADDING LIPIDS TO PROTEIN / FUNCTIONS OF LIPOPROTEINS • CONCLUSION • REFERENCES
  • 14.
    • What arelipoproteins and why do we need them? – Lipoproteins are a handful of different molecules that interact with water insoluble fat molecules, and transports those fats in the plasma. – Different lipoproteins are responsible for the transportation of different fats. – Lipoproteins allow fat to be dissolved into the plasma. – Function: Transport of fat soluble substances 14
  • 15.
    DEFINITION OF LIPOPROTEIN Lipoproteinsare molecules made up of proteins and fat.
  • 16.
    • There are4 types of lipoproteins – Chylomicrons • Transport of dietary triglycerides from the GI tract to the liver – Very Low Density Lipoproteins ( VLDL ) • Transport of triglycerides from the liver to tissues for storage and energy – Low Density Lipoproteins ( LDL ) • Transports cholesterol to peripheral tissues – High Density Lipoproteins ( HDL ) • Transports cholesterol away from the peripheral tissues to the liver 16
  • 17.
    • Lipid Chemistry –Lipids include • Cholesterol • Triglycerides • Phospholipids • Glycolipids – Lipids are important components of cell membranes 17
  • 18.
    – Fatty acidsare short to long carbon chained molecules • Saturated fatty acids – No double bonds between carbons ( C – C ) – Solid at room temperature – Animal sources • Unsaturated fatty acids – Double bonds between carbon bonds ( C = C) – Usually liquid at room temp – Plant sources 18
  • 19.
    • Triglycerides – Glycerolwith 3 attached fatty acids. – 95 % of body fat is triglycerides. – Energy source when plasma glucose is decreased. – Triglycerides transported by Chylomicrons (exogeneous) and VLDL (endogenous). 19
  • 20.
    • Cholesterol – Foundonly in animals. – Important component of membranes, steroid hormones, bile and Vitamin D. – Exogeneous cholesterol comes from diet. – Endogeneous cholesterol is synthesized by the liver. – 70 % of cholesterol associated with cellular components. – 30 % is in the plasma ( ⅓ free form , ⅔ esterfied ) – Transported by HDL and LDL 20
  • 21.
    • Apolipoproteins – Outerprotein “shell” of the lipoprotein molecule. – The protein – lipid interaction allows the water insoluble lipid to become soluble in plasma. – The apolipoprotein is responsible for the interactions with cell membranes and enzymes to transport lipids to specific locations. 21
  • 22.
    • Lipoproteins – Classifiedaccording to density and electrophoresis migration. – Lipoproteins differ in their sizes, weights, chemical composition, etc. – There are four main types of lipoproteins • CHYLOMICRONS • VLDL • LDL • HDL 22
  • 23.
    • Chylomicrons – Transportsexogeneous ( dietary ) triglycerides. – 90 - 95 % by weight is triglycerides. – Absent from fasting plasma. – Inadequate clearance produces a creamy layer on the plasma. • VLDL ( Very Low Density Lipoproteins ) – Transports endogenous triglycerides from liver to tissues. – 50 - 65 % by weight is triglycerides. – Excess dietary carbohydrates are converted to triglycerides by the liver. – Once VLDL looses much of its TG’s it becomes LDL 23
  • 24.
    • LDL (Low Density Lipoproteins ) – Transports cholesterol from liver to the tissues. – Synthesized in the liver. – Approximately 50 % by weight cholesterol. – Most atherogenic lipoprotein … “ Bad Cholesterol“. • HDL ( High Density Lipoprotein ) – Transports excess cholesterol from the tissues back to the liver ( reverse transport ). – Synthesized in the liver and intestines. – Composition: • 30% PHOSPHOLIPIDS • 20% CHOLESTEROL • 50% APOPROTEIN – The “good “ cholesterol. 24
  • 25.
    Lipoprotein class Density (g/mL) Diameter (nm) Protein % of drywt Phosphol ipid % Triacylglycerol % of dry wt HDL 1.063-1.21 5 – 15 33 29 8 LDL 1.019 – 1.063 18 – 28 25 21 4 IDL 1.006-1.019 25 - 50 18 22 31 VLDL 0.95 – 1.006 30 - 80 10 18 50 chylomicrons < 0.95 100 - 500 1 - 2 7 84 Composition and properties of human lipoproteins
  • 26.
  • 27.
    •After the clathrincoat disassembles, the vesicle fuses with an endosome. •LDL is released from the receptor within the acidic environment of the endosome, and the receptor is returned to the plasma membrane. •After LDL is transferred to a lysosome, cholesterol is released & may be used, e.g., for • Cells take up LDL by receptor- mediated endocytosis, involving formation of a clathrin-coated pit & pinching off of a vesicle incorporating the receptor & LDL cargo. LDL extracellular space LDL receptor receptor-mediated endocytosis cytosol Receptor Mediated Endocytosis -
  • 29.
    •The lipoprotein allowsfats to move through the water inside and outside cells •Lipoprotein carry cholestrol & similar substance through the blood. •The handling of lipoprotein particles in the body is reffered to as lipoprotein particle metabolism. FUNCTION
  • 30.
    CONCLUSION Glycoprotein are importantglycoconjugates. They are covalently attach to carbohydrates. They are found on the outer face of the plasma membrane, in the extra cellular matrix and in the blood. Glycoprotein has various biological advantages and their study is very important in AIDS,INFLUENZA and other diseases. Lipoproteins are also important lipoconjugates, which are helpful in the transportation of Lipid molecules in the inside the human body.
  • 31.
    REFERENCE 1. TEXT BOOKOF BIOCHEMISTRY LEHNINGER NELSON & COX (iv EDITION) 2. TEXT BOOK OF BIOCHEMISTRY WILSON & WALKER