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ARAVINTH
MSc-Nanoscience and Technology
Alagappa University
Karaikudi
INTRODUCTION
 Mutation is a broad term covering a whole range of
changes to the informational molecule, DNA (made up
of the four nucleotides: the purines, adenine and
guanine, and the pyrimidines, thymine and cytosine)
packaged into chromosomes, of an organism from gene
changes to modifications of the number and structure
of chromosomes
 Point mutations are changes to the sequence of
nucleotides and may involve the substitution of
individual bases
GENOTOXICITY
 Genotoxicity describes the property of chemical
agents that damages the genetic information
within a cell causing mutations, which may lead to
cancer
 The alteration can have direct or indirect effects
on the DNA: the induction of mutations and direct
DNA damage leading to mutations
THESTUDYOFCHEMICAL,PHYSICALORBIOLOGICALAGENTS THATCAN
CHANGETHESEQUENCEORSTRUCTUREOFDNA
What is Genetic Toxicology
4
 DNA damage can be:
 at nucleotide level in DNA, or at
the chromosomal level
 induced by direct mechanisms (chemical or
metabolite interacts with DNA)
 induced by indirect mechanisms (chemical
or metabolite affects other cellular
macromolecules, e.g. mitotic spindle fibers)
WHY WE EVALUATE GENOTOXICITY
7 7
Germ Cells
spermatocytes, oocytes Somatic Cells
Heritable Damage
(genetic damage to
offspring)
Infertility Cancer Other Diseases
DNA damage is associated with many human diseases
MECHANISM
 The genotoxic substances induce damage to the
genetic material in the cells through interactions
with the DNA sequence and structure
 For example, the transition metal chromium
interacts with DNA in its high-valent oxidation state
so to incur DNA lesions leading to carcinogenesis
 The metastable oxidation state Cr(V) is achieved
through reductive activation
 Another example of a genotoxic substance causing
DNA damage are pyrrolizidine alkaloids (PAs)
 These substances are found mainly in plant species
and are poisonous to animals, including humans;
about half of them have been identified as
genotoxic and many as tumorigenic
 Hazard identification/Lead prioritization
 Companies want products to be safe and to be seen as safe for
intended uses
 Predict whether a chemical is a carcinogen
 Predict whether a chemical could cause heritable germ cell
damage
 Early testing “screening” allows Companies/Regulators to
prioritize chemicals to spend
further resources on (e.g. EPA ToxCast™)
 Mechanistic information
 Determine mechanism of action for carcinogens (genotoxic vs.
non-genotoxic)
 Basic science: study of DNA damage/repair
OBJECTIVES OF GENETIC TOXICOLOGY
TESTING
8
WHAT ARE THE GENETIC TOXICOLOGY TOOLS
10
 Hundreds of assays developed to measure DNA damage
 Assays grouped by endpoint measured
Types of DNA damage endpoints include:
 Mutations
 Changes in chromosome structure or number
 DNA damage
 DNA repair
 Biomarkers of DNA damage
Endpoints can be measured in:
 bacteria, yeast, fungi, plants, invertebrates, mammalian cells in
culture, animals and humans
Genotoxicology
Genotoxicology

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Genotoxicology

  • 2. INTRODUCTION  Mutation is a broad term covering a whole range of changes to the informational molecule, DNA (made up of the four nucleotides: the purines, adenine and guanine, and the pyrimidines, thymine and cytosine) packaged into chromosomes, of an organism from gene changes to modifications of the number and structure of chromosomes  Point mutations are changes to the sequence of nucleotides and may involve the substitution of individual bases
  • 3. GENOTOXICITY  Genotoxicity describes the property of chemical agents that damages the genetic information within a cell causing mutations, which may lead to cancer  The alteration can have direct or indirect effects on the DNA: the induction of mutations and direct DNA damage leading to mutations
  • 4. THESTUDYOFCHEMICAL,PHYSICALORBIOLOGICALAGENTS THATCAN CHANGETHESEQUENCEORSTRUCTUREOFDNA What is Genetic Toxicology 4  DNA damage can be:  at nucleotide level in DNA, or at the chromosomal level  induced by direct mechanisms (chemical or metabolite interacts with DNA)  induced by indirect mechanisms (chemical or metabolite affects other cellular macromolecules, e.g. mitotic spindle fibers)
  • 5. WHY WE EVALUATE GENOTOXICITY 7 7 Germ Cells spermatocytes, oocytes Somatic Cells Heritable Damage (genetic damage to offspring) Infertility Cancer Other Diseases DNA damage is associated with many human diseases
  • 6. MECHANISM  The genotoxic substances induce damage to the genetic material in the cells through interactions with the DNA sequence and structure  For example, the transition metal chromium interacts with DNA in its high-valent oxidation state so to incur DNA lesions leading to carcinogenesis  The metastable oxidation state Cr(V) is achieved through reductive activation
  • 7.  Another example of a genotoxic substance causing DNA damage are pyrrolizidine alkaloids (PAs)  These substances are found mainly in plant species and are poisonous to animals, including humans; about half of them have been identified as genotoxic and many as tumorigenic
  • 8.  Hazard identification/Lead prioritization  Companies want products to be safe and to be seen as safe for intended uses  Predict whether a chemical is a carcinogen  Predict whether a chemical could cause heritable germ cell damage  Early testing “screening” allows Companies/Regulators to prioritize chemicals to spend further resources on (e.g. EPA ToxCast™)  Mechanistic information  Determine mechanism of action for carcinogens (genotoxic vs. non-genotoxic)  Basic science: study of DNA damage/repair OBJECTIVES OF GENETIC TOXICOLOGY TESTING 8
  • 9. WHAT ARE THE GENETIC TOXICOLOGY TOOLS 10  Hundreds of assays developed to measure DNA damage  Assays grouped by endpoint measured Types of DNA damage endpoints include:  Mutations  Changes in chromosome structure or number  DNA damage  DNA repair  Biomarkers of DNA damage Endpoints can be measured in:  bacteria, yeast, fungi, plants, invertebrates, mammalian cells in culture, animals and humans