SlideShare a Scribd company logo
J. Bio. & Env. Sci. 2014
321 | Umar et al
RESEARCH PAPER OPEN ACCESS
Evaluation of genetic diversity in pea (Pisum sativum) based on
morpho-agronomic characteristics for yield and yield
associated traits
Hafiz Muhammad Imran Umar1
, Shoaib-Ur-Rehman1
, Muhammad Bilal1
, Syed Atif
Hasan Naqvi2
, Syed Amir Manzoor3
, Abdul Ghafoor4
, Muhammad Khalid4
,
Muhammad Tayyab Iqbal1
, Abdul Qayyum1
, Farah Ahmad5
, Malik Ahsan Irshad1
1
Department of Plant Breeding and Genetics, FAST, Bahauddin Zakariya University Multan, Pakistan.
2
Department of Plant Pathology, FAST, Bahauddin Zakariya University Multan, Pakistan
3
Department of Forestry, FAST, Bahauddin Zakariya University Multan, Pakistan
4
Institute of Agri Biotechnology and Genetic Resources, NARC, Islamabad, Pakistan
5
Department of Biotechnology, Islamia University Bahawalpur, Pakistan
Article published on May 23, 2014
Key words: Genetic diversity, Accessions, PCA, Pisum sativum, Traits.
Abstract
The genetic diversity in 128 exotic pea accessions from diverse origin was determined for four qualitative traits
flower color (FC), testa color (TC), cotyledon color (CC) and pod shape (PS) and eleven quantitative attributes i.e.,
plant height (PH), total pod number (TPN), number of pods per plant (NOPPP), total pod weight (TPW), pod
weight per plant (PEPP), average pod length (APL), average pod width (APW), average pod thickness (APT), seed
weight (SW), seed weight per plant (SWPP) and seed index (SI) through statistical software using a
nonhierarchical, PCA. The projection of attributes on PC1 and PC2 revealed that average pod thickness, average
pod length and average pod width are positively correlated to weight per pod. The projection pattern of the
attributes on first two PCs depicted that key pod weight contributing attributes were pod thickness, length and
width while the cotyledon color was opposite to weight per pod and other yield contributing traits on PC1,
therefore, it had negative correlation with all other traits. The projection of accessions on first two PCs was useful
to identify diverse groups of parents for better transgressive segregation. Promising accessions showing the
variation in the desired parameters can be utilized in the future breeding programs.
*Corresponding Author: Syed Amir Manzoor  amir.kzd@gmail.com
Journal of Biodiversity and Environmental Sciences (JBES)
ISSN: 2220-6663 (Print) 2222-3045 (Online)
Vol. 4, No. 5, p. 321-328, 2014
http://www.innspub.net
J. Bio. & Env. Sci. 2014
322 | Umar et al
Introduction
The pea (Pisum sativum L., 2n = 14) member of
Papillonacea family is an annual cool season nitrogen
fixing crop having high percentage of digestible
protein (23-33%) along with other biomolecules such
as carbohydrates and vitamins (Gatti et al., 2011). It is
an important legume crop which is thought to be
originated from Southwest Asia (Hulse, 1994). Being
a self pollinated crop, main focus of breeding in
recent times was to develop pure lines which led to
narrow genetic diversity among pea varieties
(Baranger et al., 2004). But a considerable level of
genetic variance among peas of diverse origin has also
be reported by some breeders (Nisar et al., 2011).
In order to produce transgressive segregants,
genetically different parents must to be selected for
recombination breeding in self pollinated crops. The
characterization of genetic diversity in crop species
has long been based on morphological attributes,
however, morphological variation is often found to be
of limited use because the expression of
morphological attributes may be affected by
environmental conditions, thereby constraining the
analysis of genetic variation (Nisar et al., 2008). On
the basis of morphological data, genetic diversity
assessments needs a high precision of field
experiments through recommended design and
analysis so that the germplasm may be exploited to
develop better genotypes for the upcoming scenario
(Sajjad et al., 2011). Knowledge of genetic diversity is
a useful tool in gene bank management and in
planning experiments, as it facilitates efficient
sampling and utilization of germplasm by identifying
and/or eliminating duplicates in the gene stock, and
helps in the establishment of core collections
(Ghafoor et al., 2005).
In order to maintain, evaluate and utilize germplasm
efficiently and effectively, it is important to
investigate the extent of genetic diversity it contains
(Smith et al., 1990). Many of the landraces and wild
species are maintained in the world as genetic
resources for crop improvement, but their use for
breeding is still limited and we are challenged as to
how to use this biodiversity for practical crop
improvement (Ali et al., 2007). Broad based plant
genetic resources are imperative for sound and
successful crop improvement program (Jatoi et al.,
2011). Unfortunately, the yield of pea is low in
Pakistan as compared to the world average yield
owing to the narrow genetic base and limited
variability used in the development of local varieties.
Crop improvement depends largely on the availability
of diverse germplasm and their judicial utilization
(Sardana et al., 2007).
If we are dealing with a large number of genotypes,
multivariate analytical techniques i.e., principal
component analysis (PCA), principal coordinate
analysis and cluster analysis at present are mostly
utilized to asses’ genetic diversity present in the data
set whether the data set comprises of biochemical,
morphological or molecular data. Usually a
nonhierarchical multivariate analysis technique, PCA,
is employed by the plant breeders to check the pattern
of variation in the given data. Therefore, the present
study was undertaken to study the genetic diversity
in exotic germplasm of pea accession of diverse origin
and for the determination of extent of variation in the
given accession for four qualitative traits and eleven
quantitative attributes through statistical software
using a nonhierarchical, PCA.
Material and method
Study area
The experiment was conducted during autumn season in
glass house condition in Plant Genetic Resource
Institute (PGRI), National Agriculture Research Center
(NARC), Islamabad (30° 42′ N and 37° 08′ E) Pakistan.
Planting Material
Pea germplasm used in this study consisting of 128
exotic accessions obtained from ICARDA gene bank.
Origin of material was from various Western
countries. Recommended plant production measures
were adopted to raise the crop. Plant to plant distance
was maintained at 6 inches (Table 1).
J. Bio. & Env. Sci. 2014
323 | Umar et al
Table 1. List of accessions and their origin.
Accession
#
Origin
country
Accession
#
Origin
country
Accession
#
Origin
country
Accession
#
Origin
country
IG 50545 DEU IG 50754 NLD IG 50937 GBR IG 123040 ITA
IG 50547 ETH IG 50777 SWE IG 50946 FRA IG 123091 ITA
IG 50556 NLD IG 50782 NLD IG 50953 AS GBR IG 123092 ITA
IG 50564 FRA IG 50785 NLD IG 50953 BR GBR IG 123094 ITA
IG 50566 DEU IG 50788 BEL IG 50954 GBR IG 123131 COL
IG 50580 RUS IG 50792 ETH IG 50955 USA IG 123208 CHN
IG 50581 DEU IG 50805 FRA IG 50957 DEU IG 123308 KAZ
IG 50591 UNK IG 50810 FRA IG 50958 USA IG 123317 PRT
IG 50602 NLD IG 50818 DEU IG 50959 DEU IG 123336 MAR
IG 50604 DEU IG 50820 DEU IG 50963 DEU IG 123349 TUR
IG 50611 DEU IG 50821 USA IG 50978 POL IG 123356 CHL
IG 50613 UKR IG 50828 GBR IG 50982 DEU IG 123451 ITA
IG 50615 FRA IG 50830 BEL IG 50987 DEU IG 125371 RUS
IG 50622 NLD IG 50836 DEU IG 51004 GBR IG 125379 BLR
IG 50623 NLD IG 50837 DEU IG 51008 DEU IG 125407 BLR
IG 50624 NLD IG 50838 DEU IG 51009 DEU IG 125410 SWE
IG50625 NLD IG 50840 DEU IG 51016 USA IG 125413 RUS
IG 50626 NLD IG 50845 PRT IG 51017 USA IG 125421 RUS
IG 50632 DEU IG 50863 USA IG 51019 NLD IG 125439 ITA
IG 50634 DEU IG 50870 DEU IG 51025 GBR IG 125448 RUS
IG 50638 DEU IG 50871 DEU IG 51029 DEU IG 125461 RUS
IG 50646 NLD IG 50878 GRC IG 51069 GBR IG 125470 GEO
IG 50662 ROM IG 50898 GRC IG 51072 FRA IG 125525 AFG
IG 50663 FRA IG 50903 DEU IG 51077 CHN IG 125556 ITA
IG 50686 DEU IG 50905 GBR IG 51083 DEU IG 125593 ITA
IG 50689 DEU IG 50907 DEU IG 51085 DEU IG 125614 RUS
IG 50694 ETH IG 50910 DEU IG 51094 GBR IG 128865 CYP
IG 50712 DEU IG 50920 USA IG 51097 CAN IG 128911 MNG
IG 50730 CZE IG 50923 FRA IG 51100 SWE IG 129819 RUS
IG 50733 GBR IG 50924 DEU IG 51103 UNK IG 128950 CHL
IG 50734 SWE IG 50932 DEU IG 51128 FIN IG 129052 FIN
IG 50735 BGR IG 50933 CZE IG 51133 FRA IG 1254116 Unknown
Qualitative and quantitative attributes
Observations were recorded on both qualitative
attributes i.e., flower color (FC), testa color (TC),
cotyledon color (CC) and pod shape (PS) and
quantitative attributes i.e., plant height (PH), total
pod number (TPN), number of pods per plant
(NOPPP), total pod weight (TPW), pod weight per
plant (PEPP), average pod length (APL), average pod
width (APW), average pod thickness (APT), seed
weight (SW), seed weight per plant (SWPP) and seed
index (SI). Five samples of pod of each accession were
taken for the data recording.
J. Bio. & Env. Sci. 2014
324 | Umar et al
Statistical analysis
Mean data of each parameter viz., Mean (M),
Variance (Var), and Standard deviation (Std. D) for
average plant height (APH), number of pod (NOP),
number of pod per plant (NOPPP), pod weight (PW),
pod weight per plant (PWPP), seed weight (SW), seed
weight per plant (SWPP), average pod length (APL),
average pod width (APW), average pod thickness
(APT), seed index (SI), was calculated and the data
was subjected to analysis of variance (ANOVA) for
simple statistics through SPSS (Version 6.0) PAST
and Microsoft Excel 2007. Principal component
analysis was carried out through Microsoft Excel
2007, SPSS v16.0 and PAST software to find the
pattern of variation in the data.
Results
Morphological traits
Morphological characteristics of 128 pea genotypes
were determined on five randomly selected pods per
genotype. Variability was observed among the
accessions studied for qualitative attributes i.e.,
flower color (white and purple), testa color (green and
creamy), cotyledon color (yellow and green) and pod
shape (straight and curved). Traits frequency
distributions revealed that accessions were
predominantly vigorous. Frequency distribution of
128 pea germplasm for qualitative attributes is shown
in (Table 5). High variation along with range was
observed for most of the characters that indicated the
scope of simple selection. The result of analysis of
variance (ANOVA) revealed that the accession
included in this study had significant variation for
most of the traits as illustrated in (Table 3).
Maximum variations were observed for cotyledon
color, testa color and pod shape whereas minimum
variations were recorded for flower color. Basic
statistics including mean, standard deviation and
variance have been presented in the. The extent of
range for average plant height was 14.39-245.53 cm.
Total number of pods per accession ranged from 2-
210. The range of number of pods per plant was 1-70.
Pod weight of accessions ranged from 0.7-107 g while
pod weight of each plant ranged from 0.45-47.63 g.
The extent of range per seed weight accession was
0.4-90 g while seed weight per plant ranged from 0.3-
70.1 g. The range for average pod length, average pod
width and average pod thickness was recorded from
1.73-8.55 cm, 0.2-0.9 cm and 0.2-0.8 cm respectively.
The range for seed index was recorded from 8-31.3
(Table 2).
Table 2. Basic statistical analysis of 11 quantitative traits of Pisum sativum germplasm
Mean
Standard
error
Standard
deviation
Sample
variance
Range
Minimum Maximum
APH (cm) 93.04302 4.783274 54.11657 2928.603 14.39 245.53
TPN 26.63281 2.59459 29.35444 861.683 2 210
NOPPP 15.85677 1.233895 13.95993 194.8796 1 70
PW (g) 18.75086 1.735965 19.6402 385.7375 0.71 107
PWPP (g) 11.27113 0.933075 10.55654 111.4405 0.45 47.63
SW (g) 15.49203 1.489706 16.8541 284.0608 0.44 90
SWPP (g) 9.466419 0.899909 10.18131 103.6591 0.31 70.12
APL (cm) 4.917459 0.101251 1.145529 1.312236 1.72 8.55
APW (cm) 0.49478 0.009917 0.112195 0.012588 0.17 0.85
APT (cm) 0.612728 0.009267 0.104842 0.010992 0.20 0.81
SI 17.90914 0.465629 5.267987 27.75168 8 31.3
J. Bio. & Env. Sci. 2014
325 | Umar et al
Table 3. Analysis of variance (ANONA)
Source of Variation SS Df MS F P-value F crit
Between Groups 973650.3 14 69546.45 213.7604 0 1.697004
Within Groups 614907.2 1890 325.3477
Total 1588558 1904
Principal component analysis
Out of 15 principal components (PCs), first 5
exhibited eigenvalue greater than 1 (significant) while
the rest of 10 PCs exhibited non significant variation
so they were not worth interpreting (Table 4). The
first 5 PCs showed 79.406% variation in the
accession. The first PC accounted 40.298% variation,
second PC showed 15.027% variation, third PC
showed 9.664% variation, fourth PC accounted for
6.925% variation while fifth PC accounted for 5.987%
variation (Figure 1). The first PC was highly related to
weight per pod, seed weight, pod weight, seed weight
per pod, number of pods per plant and total pod
number, average pod thickness, average pod length
and average width. This implies that PC1 is a
weighted average of these nine attributes. The traits
of significant importance in PC2 were average pod
thickness, average pod length, average width and seed
index. PC3 was related to cotyledon color and testa
color. The fourth PC was related to average plant
height and pod shape while the fifth PC was related to
flower color (Table 5). The projection of attributes on
PC1 and PC2 revealed that average pod thickness,
average pod length and average pod width are
positively correlated to weight per pod. The projection
pattern of the attributes on first two PCs depicted that
key pod weight contributing attributes were pod
thickness, length and width. Cotyledon color was
opposite to weight per pod and other yield
contributing traits on PC1, therefore, it had negative
correlation with all other attributes. The projection of
accessions on first two PCs was useful to identify
diverse groups of parents for better transgressive
segregation (Figure 2). The projection of accessions
on first 2 PCs showed population structure and
illustrated the identified hetrotic accessions. The
accession IG_50547 was most distinct and variant
among rest of all. Accession IG_51094, IG_123451
and IG_50566 were opposite to accession IG_51128,
IG-123040 and IG_125448. The genotype IG_123208
was contrasted to accession IG_125439. IG_128950
was opposite to IG_125470 etc. On the basis of this
analysis, promising genotypes have been identified
and these are suggested to use in genetic
improvement through selection or involving these in
hybrid program for crop improvement (Figure 3).
Table 4. Eigen value and % variance
PC Eigen value
%
Variance
PC Eigen value
%
Variance
PC Eigen value
%
Variance
1 6.0447 40.298 6 0.898085 5.9872 11 0.217124 1.4475
2 2.25404 15.027 7 0.678066 4.5204 12 0.0747416 0.49828
3 1.44956 9.6638 8 0.453869 3.0258 13 0.061935 0.4129
4 1.12389 7.4926 9 0.362197 2.4146 14 0.00869331 0.057955
5 1.03875 6.925 10 0.334112 2.2274 15 0.00023018 0.0015345
J. Bio. & Env. Sci. 2014
326 | Umar et al
Table 5. Principal components for fifteen attributes
Traits
Eigen values
PC1 PC2 PC3 PC4 PC5
Weight/ Pod 0.931 -.077 0.020 -0.074 -0.102
Seed Weight 0.920 -0.183 0.192 0.085 -0.048
Pod Weight 0.915 -0.174 0.254 0.099 -0.015
Seed weight/ Pod 0.867 -0.085 -0.064 -0.082 -0.150
Number of Pods per Plant 0.861 -0.323 0.082 -0.166 -0.034
Pod Number 0.813 -0.366 0.280 0.005 0.071
Average Pod Thickness 0.557 0.490 -0.247 0.207 0.122
Average Pod Length 0.572 0.739 -0.010 0.015 -0.007
Average Pod Width 0.535 0.723 0.021 -0.044 -0.020
Seed Index 0.332 0.577 -0.265 0.227 0.054
Testa Color 0.211 -0.327 -0.744 0.087 -0.348
Cotyledon Color -0.437 0.311 0.672 0.057 -0.120
Average Plant Height -0.017 -0.129 0.278 0.802 -0.201
Flower Color 0.155 0.171 0.183 -0.536 0.027
Pod Shape 0.218 -0.218 -0.106 0.172 0.896
Table 6. Frequency distribution of qualitative traits
S. No Traits Frequency Frequency %
1 Flower Color
i) White
ii) Purple
121
7
94.5
5.5
2 Testa Color
i) Green
ii) Creamy
104
24
81.2
18.8
3 Cotyledon color
i) Yellow
ii) Green
55
73
43
57
4 Pod Shape
i) Straight
ii) Curved
105
23
82
18
J. Bio. & Env. Sci. 2014
327 | Umar et al
Fig. 1. Scree plot between eigen values and number
of principal components
Fig. 2. Principal component biplot of yield traits
IG_50545
IG_50547
IG_50556
IG_50564
IG_50566
IG_50580
IG_50581
IG_50591
IG_50602
IG_50604
IG_50611
IG_50613
IG_50615IG_50622
IG_50623
IG_50624
IG50625IG_50626
IG_50632
IG_50634
IG_50638
IG_50646
IG_50662
IG_50663
IG_50686
IG_50689
IG_50694
IG_50712
IG_50730
IG_50733IG_50734
IG_50735IG_50754
IG_50777
IG_50782
IG_50785
IG_50788
IG_50792
IG_50805
IG_50810
IG_50818
IG_50820
IG_50821
IG_50828
IG_50830
IG_50836
IG_50837
IG_50838
IG_50840
IG_50845
IG_50863
IG_50870
IG_50871
IG_50878
IG_50898
IG_50903
IG_50905IG_50907
IG_50910
IG_50920
IG_50923
IG_50924
IG_50932
IG_50933
IG_50937
IG_50946
IG_50953_AS
IG_50953_BR
IG_50954
IG_50955
IG_50957
IG_50958
IG_50959IG_50963
IG_50978
IG_50982
IG_50987
IG_51004
IG_51008IG_51009
IG_51016
IG_51017
IG_51019
IG_51025
IG_51029
IG_51069
IG_51072
IG_51077
IG_51083
IG_51085
IG_51094
IG_51097
IG_51100
IG_51103
IG_51128
IG_51133
IG_123040
IG_123091IG_123092
IG_123094
IG_123131
IG_123208
IG_123308
IG_123317
IG_123336IG_123349
IG_123356
IG_123451
IG_125371
IG_125379
IG_125407
IG_125410IG_125413
IG_125421
IG_125439
IG_125448
IG_125461
IG_125470
IG_125525IG_125556
IG_125593
IG_125614
IG_128865
IG_128911
IG_129819
IG_128950
IG_129052
IG_1254116-1.8 -1.2 -0.6 0.6 1.2 1.8 2.4 3.0 3.6
Principal Component 1: 40.298%
-4.0
-3.2
-2.4
-1.6
-0.8
0.8
1.6
2.4
PrincipalComponent2:15.027%
Fig. 3. Two dimensional ordinations of 128 pea
accessions on PC1 and PC2
Discussion
Phenotypic characterization is the first step towards
the classification of crop germplasm (Nisar et al.,
2008), the outcome of this study revealed that there
is immense diversity in the present exotic pea
germplasm. Considerable degree of allelic variation
was observed for flower color, cotyledon color and
seed surface as well. All these parameters are of much
importance for description of the genotypes. As the
quantitative traits are economically more important
and are generally used for the improvement of the
crop. Similar results were obtained by (Nisar et al.,
2008). Analysis showed that high degrees of
variations were observed for average plant height,
number of pods, number of pods per plant per
accession, pod weight per plant, seed weight per
accession and seed weight per pod, our results are in
agreement with the findings of (Ali et al., 2007) which
described pod length showed low degree of variations
similarly our results are in agreement with findings of
(Ali et al., 2007). Whereas contrasting results were
obtained by (Gritton, 1980) and (Duke, 1981)
reported that pod length range from 4 to15cm. Pod
width and pod thickness showed a very narrow
genetic background, our results are in disagreement
with the findings of (Ali et al., 2007) which may due
to the exotic nature of germplasm in the same
climate. Number of pods per plant showed high
degree of diversity and can be used directly for the
improvement of the crop. The results are in
accordance with the findings of (Ali et al., 2007)
which observed the consistency of the diversity of the
trait in the pea germplasm. 100 seed weight exhibited
low degree of variations; our results are in agreement
with findings of (Duke, 1981).
References
Ali Z, Qureshi AS, Ali W, Gulzar H, Nisar M,
Ghafoor A. 2007. Evaluation of genetic diversity
present in pea (Pisum sativum L.) germplasm based
on morphological traits, resistance to powdery
mildew and molecular characteristics. Pakistan
Journal of Botany 39: 2739-2747.
Baranger A, Aubert G, Arnau G, Lainé A,
Deniot G, Potier J. 2004. Genetic diversity within
Pisum sativum using protein-and PCR-based
markers. Theoretical and Applied Genetics 108:
1309-1321.
J. Bio. & Env. Sci. 2014
328 | Umar et al
Duke JA. 1981. Handbook of legumes of world
economic importance. P, 71.
Gatti I, Espósiton M, Almirón P, Cravero V,
Cointry E. 2011. Diversity of pea (Pisum sativum)
accessions based on morphological data for
sustainable field pea breeding in Argentina. Genetics
and Molecular Research 10: 3403-3410.
Ghafoor A, Ahmad Z, Anwar R. 2005. Genetic
diversity in Pisum sativum and a strategy for
indigenous biodiversity conservation. Pakistan
Journal of Botony 37: 71-77.
Gritton ET. 1980. Field pea, hybridization of crop
plants. P. 347.
Hulse J. 1994. Nature, composition, and utilization
of food legumes. Expanding the production and use of
cool season food legumes. Journal of Food,
Agriculture and Environment. 13: 77-97.
Jatoi SA, Javaid A, Iqbal M, Sayal OU, Masood
MS, Siddiqui SU. 2011. Genetic diversity in radish
germplasm for morphological traits and seed storage
proteins. Pakistan Journal of Botony. 43: 2507-2512.
Nisar M, Ghafoor A, Ahmad H, Khan M,
Qureshi A, Ali H. 2008. Evaluation of genetic
diversity of pea germplasm through phenotypic trait
analysis. Pakistan Journal of Botony. 40: 2081-2086.
Nisar M, Ghafoor A, Khan M. 2011. Phenotypic
variation in the agronomic and morphological traits
of Pisum sativum L. germplasm obtained from
different parts of the world. Russian Journal of
Genetics. 47: 19-25.
Sajjad M, Khan S, Khan AS. 2011. Exploitation of
germplasm for grain yield improvement in spring
wheat (Triticum aestivum). International Journal of
Agriculture and Biology. 13: 695-700.
Sardana S, Mahajan R, Gautam N, Ram B.
2007. Genetic variability in pea (Pisum sativum L.)
germplasm for utilization. SABRAO Journal of
Breeding and Genetics 39: 31-41.
Smith O, Smith J, Bowen S, Tenborg R, Wall
R.1990. Similarities among a group of elite maize
inbreds as measured by pedigree, F1 grain yield, grain
yield, heterosis, and RFLPs. Theoretical and Applied
Genetics 80: 833-840.

More Related Content

What's hot

Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...
Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...
Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...
Alexander Decker
 
Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...
Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...
Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...
AI Publications
 
Genetic variability and heritability studies in introgressed F6 progenies from
Genetic variability and heritability studies in introgressed F6 progenies fromGenetic variability and heritability studies in introgressed F6 progenies from
Genetic variability and heritability studies in introgressed F6 progenies from
Nirmal Parde
 
Genetic diversity in pea germplasm using RAPD Markers
Genetic diversity in pea germplasm using RAPD MarkersGenetic diversity in pea germplasm using RAPD Markers
Genetic diversity in pea germplasm using RAPD Markers
Shujaul Mulk Khan
 
Assesment of genetic divergence in chickpea kabuli cultivars
Assesment of genetic divergence in chickpea kabuli cultivarsAssesment of genetic divergence in chickpea kabuli cultivars
Assesment of genetic divergence in chickpea kabuli cultivars
Naveen Jakhar
 
IJASc Citrus paperpdf
IJASc Citrus paperpdfIJASc Citrus paperpdf
IJASc Citrus paperpdfSwati Saxena
 
D03011027030
D03011027030D03011027030
D03011027030
iosrphr_editor
 
22. utilization of ssr markers for seed purity testing in popular rice hybrids
22. utilization of ssr markers for seed purity testing in popular rice hybrids22. utilization of ssr markers for seed purity testing in popular rice hybrids
22. utilization of ssr markers for seed purity testing in popular rice hybridsVishwanath Koti
 
Genetic analysis of superior doubles haploids rice lines derivated from anthe...
Genetic analysis of superior doubles haploids rice lines derivated from anthe...Genetic analysis of superior doubles haploids rice lines derivated from anthe...
Genetic analysis of superior doubles haploids rice lines derivated from anthe...
Muh Syafii
 
Responses of wheat seedling to varying moisture conditions and relationship b...
Responses of wheat seedling to varying moisture conditions and relationship b...Responses of wheat seedling to varying moisture conditions and relationship b...
Responses of wheat seedling to varying moisture conditions and relationship b...
Agriculture Journal IJOEAR
 
Dalamu et al. 2012
Dalamu et al. 2012Dalamu et al. 2012
Dalamu et al. 2012Swati Saxena
 
Characterization of f7 introgression lines from interspecific crosses in cott...
Characterization of f7 introgression lines from interspecific crosses in cott...Characterization of f7 introgression lines from interspecific crosses in cott...
Characterization of f7 introgression lines from interspecific crosses in cott...
Nirmal Parde
 
GENETIC DIVERSITY IN HORSEGRAM
GENETIC DIVERSITY IN HORSEGRAMGENETIC DIVERSITY IN HORSEGRAM
GENETIC DIVERSITY IN HORSEGRAM
SANDEEP VARMA VUNNAM
 
line tester analysis castor
line tester analysis castorline tester analysis castor
line tester analysis castor
Dr. Indrajay R. Delvadiya
 
F03202044047
F03202044047F03202044047
F03202044047
theijes
 
Promising parents for grain yield and early maturity in rabi sorghum (sorghum...
Promising parents for grain yield and early maturity in rabi sorghum (sorghum...Promising parents for grain yield and early maturity in rabi sorghum (sorghum...
Promising parents for grain yield and early maturity in rabi sorghum (sorghum...
Nirmal Parde
 
Heterosis studies for yield and yield contributing characters in blackgram
Heterosis studies for yield and yield contributing characters in blackgramHeterosis studies for yield and yield contributing characters in blackgram
Heterosis studies for yield and yield contributing characters in blackgram
Nirmal Parde
 

What's hot (19)

Aijrfans14 209
Aijrfans14 209Aijrfans14 209
Aijrfans14 209
 
Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...
Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...
Genetic variability assessment of ethiopian caraway (trachyspermum ammi l. sp...
 
Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...
Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...
Molecular Diversity Analysis of Some Local Ginger (Zingiber officinale) Genot...
 
Genetic variability and heritability studies in introgressed F6 progenies from
Genetic variability and heritability studies in introgressed F6 progenies fromGenetic variability and heritability studies in introgressed F6 progenies from
Genetic variability and heritability studies in introgressed F6 progenies from
 
Genetic diversity in pea germplasm using RAPD Markers
Genetic diversity in pea germplasm using RAPD MarkersGenetic diversity in pea germplasm using RAPD Markers
Genetic diversity in pea germplasm using RAPD Markers
 
Assesment of genetic divergence in chickpea kabuli cultivars
Assesment of genetic divergence in chickpea kabuli cultivarsAssesment of genetic divergence in chickpea kabuli cultivars
Assesment of genetic divergence in chickpea kabuli cultivars
 
IJASc Citrus paperpdf
IJASc Citrus paperpdfIJASc Citrus paperpdf
IJASc Citrus paperpdf
 
D03011027030
D03011027030D03011027030
D03011027030
 
22. utilization of ssr markers for seed purity testing in popular rice hybrids
22. utilization of ssr markers for seed purity testing in popular rice hybrids22. utilization of ssr markers for seed purity testing in popular rice hybrids
22. utilization of ssr markers for seed purity testing in popular rice hybrids
 
Genetic analysis of superior doubles haploids rice lines derivated from anthe...
Genetic analysis of superior doubles haploids rice lines derivated from anthe...Genetic analysis of superior doubles haploids rice lines derivated from anthe...
Genetic analysis of superior doubles haploids rice lines derivated from anthe...
 
Responses of wheat seedling to varying moisture conditions and relationship b...
Responses of wheat seedling to varying moisture conditions and relationship b...Responses of wheat seedling to varying moisture conditions and relationship b...
Responses of wheat seedling to varying moisture conditions and relationship b...
 
Dalamu et al. 2012
Dalamu et al. 2012Dalamu et al. 2012
Dalamu et al. 2012
 
Characterization of f7 introgression lines from interspecific crosses in cott...
Characterization of f7 introgression lines from interspecific crosses in cott...Characterization of f7 introgression lines from interspecific crosses in cott...
Characterization of f7 introgression lines from interspecific crosses in cott...
 
GENETIC DIVERSITY IN HORSEGRAM
GENETIC DIVERSITY IN HORSEGRAMGENETIC DIVERSITY IN HORSEGRAM
GENETIC DIVERSITY IN HORSEGRAM
 
line tester analysis castor
line tester analysis castorline tester analysis castor
line tester analysis castor
 
F03202044047
F03202044047F03202044047
F03202044047
 
Promising parents for grain yield and early maturity in rabi sorghum (sorghum...
Promising parents for grain yield and early maturity in rabi sorghum (sorghum...Promising parents for grain yield and early maturity in rabi sorghum (sorghum...
Promising parents for grain yield and early maturity in rabi sorghum (sorghum...
 
Heterosis studies for yield and yield contributing characters in blackgram
Heterosis studies for yield and yield contributing characters in blackgramHeterosis studies for yield and yield contributing characters in blackgram
Heterosis studies for yield and yield contributing characters in blackgram
 
Oliver_2014
Oliver_2014Oliver_2014
Oliver_2014
 

Viewers also liked

Presentación PJ2040
Presentación PJ2040Presentación PJ2040
Presentación PJ2040
Omar Amed Del Carpio Rodríguez
 
Benifits of okra vegetables By Allah Dad Khan
Benifits of okra vegetables By Allah Dad Khan Benifits of okra vegetables By Allah Dad Khan
Benifits of okra vegetables By Allah Dad Khan
Mr.Allah Dad Khan
 
Reproductive system of okra
Reproductive system of okraReproductive system of okra
Reproductive system of okra
ishtiaq shariq
 
A Brief Description of Pea
A Brief Description of Pea A Brief Description of Pea
A Brief Description of Pea
ishtiaq shariq
 
Pea
PeaPea
Economics of seed production of okra
Economics of seed  production of okraEconomics of seed  production of okra
Economics of seed production of okra
Kerala Agricultural University, Thrissur, India.
 
Breeding in Brinjal
Breeding in Brinjal Breeding in Brinjal
Breeding in Brinjal
Naveen Jakhar
 
Pigeon pea (Cjanus cajon)
Pigeon pea (Cjanus cajon)Pigeon pea (Cjanus cajon)
Pigeon pea (Cjanus cajon)
Keshav Poply
 
Okra
OkraOkra
Potato
PotatoPotato
potato
potatopotato
potato
KOUSHIK DEB
 
Hybrid seed production okra
Hybrid seed production okraHybrid seed production okra
Hybrid seed production okraSangram Singh
 
Breeding methods for vegetables
Breeding  methods for  vegetablesBreeding  methods for  vegetables
Breeding methods for vegetables
Naveen Jakhar
 
Hybrid seed-production-in-vegetables
Hybrid seed-production-in-vegetablesHybrid seed-production-in-vegetables
Hybrid seed-production-in-vegetables
Junaid Abbas
 

Viewers also liked (14)

Presentación PJ2040
Presentación PJ2040Presentación PJ2040
Presentación PJ2040
 
Benifits of okra vegetables By Allah Dad Khan
Benifits of okra vegetables By Allah Dad Khan Benifits of okra vegetables By Allah Dad Khan
Benifits of okra vegetables By Allah Dad Khan
 
Reproductive system of okra
Reproductive system of okraReproductive system of okra
Reproductive system of okra
 
A Brief Description of Pea
A Brief Description of Pea A Brief Description of Pea
A Brief Description of Pea
 
Pea
PeaPea
Pea
 
Economics of seed production of okra
Economics of seed  production of okraEconomics of seed  production of okra
Economics of seed production of okra
 
Breeding in Brinjal
Breeding in Brinjal Breeding in Brinjal
Breeding in Brinjal
 
Pigeon pea (Cjanus cajon)
Pigeon pea (Cjanus cajon)Pigeon pea (Cjanus cajon)
Pigeon pea (Cjanus cajon)
 
Okra
OkraOkra
Okra
 
Potato
PotatoPotato
Potato
 
potato
potatopotato
potato
 
Hybrid seed production okra
Hybrid seed production okraHybrid seed production okra
Hybrid seed production okra
 
Breeding methods for vegetables
Breeding  methods for  vegetablesBreeding  methods for  vegetables
Breeding methods for vegetables
 
Hybrid seed-production-in-vegetables
Hybrid seed-production-in-vegetablesHybrid seed-production-in-vegetables
Hybrid seed-production-in-vegetables
 

Similar to Evaluation of genetic diversity in pea (Pisum sativum) based on morpho-agronomic characteristics for yield and yield associated traits

best publications
 best publications best publications
best publications
akhila1001
 
Chiranjeev patel thesis viva voce
Chiranjeev patel thesis viva voceChiranjeev patel thesis viva voce
Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...
Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...
Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...
ijtsrd
 
Genetic analysis of F2 population of tomato for studying quantitative traits ...
Genetic analysis of F2 population of tomato for studying quantitative traits ...Genetic analysis of F2 population of tomato for studying quantitative traits ...
Genetic analysis of F2 population of tomato for studying quantitative traits ...
Journal of Research in Biology
 
Principal Component Analysis for Evaluation of Guinea grass (Panicum maximum...
Principal Component Analysis for Evaluation of Guinea grass  (Panicum maximum...Principal Component Analysis for Evaluation of Guinea grass  (Panicum maximum...
Principal Component Analysis for Evaluation of Guinea grass (Panicum maximum...
Agriculture Journal IJOEAR
 
Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)
Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)
Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)
IJERA Editor
 
Response of commercial rice germplasm on agronomic trait
Response of commercial rice germplasm on agronomic traitResponse of commercial rice germplasm on agronomic trait
Response of commercial rice germplasm on agronomic traitAlexander Decker
 
Varietal differences in seed germination and seedling vigour characteristics ...
Varietal differences in seed germination and seedling vigour characteristics ...Varietal differences in seed germination and seedling vigour characteristics ...
Varietal differences in seed germination and seedling vigour characteristics ...
Open Access Research Paper
 
Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...
Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...
Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...
Premier Publishers
 
Genetic diversity and association analysis for different morphological traits...
Genetic diversity and association analysis for different morphological traits...Genetic diversity and association analysis for different morphological traits...
Genetic diversity and association analysis for different morphological traits...
Open Access Research Paper
 
GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...
GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...
GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...
Professor Bashir Omolaran Bello
 
Effect of wheat straw components on the yield of pleurotus eous
Effect of wheat straw components on the yield of pleurotus eousEffect of wheat straw components on the yield of pleurotus eous
Effect of wheat straw components on the yield of pleurotus eousDr. siddhant
 
Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...
Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...
Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...
SSR Institute of International Journal of Life Sciences
 
Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...
Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...
Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...
Premier Publishers
 
tomato fruit show wide phenotypic diversity but fruit developmental gene show...
tomato fruit show wide phenotypic diversity but fruit developmental gene show...tomato fruit show wide phenotypic diversity but fruit developmental gene show...
tomato fruit show wide phenotypic diversity but fruit developmental gene show...Kamal Tyagi
 
Genetic variability, heritability, genetic advance, genetic advance as percen...
Genetic variability, heritability, genetic advance, genetic advance as percen...Genetic variability, heritability, genetic advance, genetic advance as percen...
Genetic variability, heritability, genetic advance, genetic advance as percen...
Premier Publishers
 
Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...
Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...
Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...
OssmanBarrientosDiaz
 
Molecular characterization of rice (Oryza sativa L.) genotypes using target r...
Molecular characterization of rice (Oryza sativa L.) genotypes using target r...Molecular characterization of rice (Oryza sativa L.) genotypes using target r...
Molecular characterization of rice (Oryza sativa L.) genotypes using target r...
Innspub Net
 
Evaluation of seed storage proteins in common bean by some biplot analysis
Evaluation of seed storage proteins in common bean by some biplot analysisEvaluation of seed storage proteins in common bean by some biplot analysis
Evaluation of seed storage proteins in common bean by some biplot analysis
INNS PUBNET
 
Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...
Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...
Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...
Innspub Net
 

Similar to Evaluation of genetic diversity in pea (Pisum sativum) based on morpho-agronomic characteristics for yield and yield associated traits (20)

best publications
 best publications best publications
best publications
 
Chiranjeev patel thesis viva voce
Chiranjeev patel thesis viva voceChiranjeev patel thesis viva voce
Chiranjeev patel thesis viva voce
 
Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...
Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...
Genetic Variability in Proximate, Mineral, Vitamin, Carotene and Anti Nutrien...
 
Genetic analysis of F2 population of tomato for studying quantitative traits ...
Genetic analysis of F2 population of tomato for studying quantitative traits ...Genetic analysis of F2 population of tomato for studying quantitative traits ...
Genetic analysis of F2 population of tomato for studying quantitative traits ...
 
Principal Component Analysis for Evaluation of Guinea grass (Panicum maximum...
Principal Component Analysis for Evaluation of Guinea grass  (Panicum maximum...Principal Component Analysis for Evaluation of Guinea grass  (Panicum maximum...
Principal Component Analysis for Evaluation of Guinea grass (Panicum maximum...
 
Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)
Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)
Analysis of Seed Proteins in Groundnut Cultivars (Arachis hypogaea L.)
 
Response of commercial rice germplasm on agronomic trait
Response of commercial rice germplasm on agronomic traitResponse of commercial rice germplasm on agronomic trait
Response of commercial rice germplasm on agronomic trait
 
Varietal differences in seed germination and seedling vigour characteristics ...
Varietal differences in seed germination and seedling vigour characteristics ...Varietal differences in seed germination and seedling vigour characteristics ...
Varietal differences in seed germination and seedling vigour characteristics ...
 
Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...
Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...
Genetic Variability, Heritability and Genetic Advance in Potato (Solanum Tube...
 
Genetic diversity and association analysis for different morphological traits...
Genetic diversity and association analysis for different morphological traits...Genetic diversity and association analysis for different morphological traits...
Genetic diversity and association analysis for different morphological traits...
 
GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...
GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...
GENETIC DIVERSITY AND CORRELATED RESPONSE TO SELECTION OF GRAIN YIELD AND ASS...
 
Effect of wheat straw components on the yield of pleurotus eous
Effect of wheat straw components on the yield of pleurotus eousEffect of wheat straw components on the yield of pleurotus eous
Effect of wheat straw components on the yield of pleurotus eous
 
Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...
Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...
Induction of Genetic Variability in Soybean in M3 Generation for Quantitative...
 
Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...
Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...
Genetic Variability, Heritability and Genetic Advance of Kabuli Chickpea (Cic...
 
tomato fruit show wide phenotypic diversity but fruit developmental gene show...
tomato fruit show wide phenotypic diversity but fruit developmental gene show...tomato fruit show wide phenotypic diversity but fruit developmental gene show...
tomato fruit show wide phenotypic diversity but fruit developmental gene show...
 
Genetic variability, heritability, genetic advance, genetic advance as percen...
Genetic variability, heritability, genetic advance, genetic advance as percen...Genetic variability, heritability, genetic advance, genetic advance as percen...
Genetic variability, heritability, genetic advance, genetic advance as percen...
 
Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...
Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...
Glycerol-3-phosphate Acyltransferase (GPAT) genes of Eugenia uniflora L. and ...
 
Molecular characterization of rice (Oryza sativa L.) genotypes using target r...
Molecular characterization of rice (Oryza sativa L.) genotypes using target r...Molecular characterization of rice (Oryza sativa L.) genotypes using target r...
Molecular characterization of rice (Oryza sativa L.) genotypes using target r...
 
Evaluation of seed storage proteins in common bean by some biplot analysis
Evaluation of seed storage proteins in common bean by some biplot analysisEvaluation of seed storage proteins in common bean by some biplot analysis
Evaluation of seed storage proteins in common bean by some biplot analysis
 
Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...
Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...
Genetic parameter estimates and diversity studies of upland rice (Oryza sativ...
 

Evaluation of genetic diversity in pea (Pisum sativum) based on morpho-agronomic characteristics for yield and yield associated traits

  • 1. J. Bio. & Env. Sci. 2014 321 | Umar et al RESEARCH PAPER OPEN ACCESS Evaluation of genetic diversity in pea (Pisum sativum) based on morpho-agronomic characteristics for yield and yield associated traits Hafiz Muhammad Imran Umar1 , Shoaib-Ur-Rehman1 , Muhammad Bilal1 , Syed Atif Hasan Naqvi2 , Syed Amir Manzoor3 , Abdul Ghafoor4 , Muhammad Khalid4 , Muhammad Tayyab Iqbal1 , Abdul Qayyum1 , Farah Ahmad5 , Malik Ahsan Irshad1 1 Department of Plant Breeding and Genetics, FAST, Bahauddin Zakariya University Multan, Pakistan. 2 Department of Plant Pathology, FAST, Bahauddin Zakariya University Multan, Pakistan 3 Department of Forestry, FAST, Bahauddin Zakariya University Multan, Pakistan 4 Institute of Agri Biotechnology and Genetic Resources, NARC, Islamabad, Pakistan 5 Department of Biotechnology, Islamia University Bahawalpur, Pakistan Article published on May 23, 2014 Key words: Genetic diversity, Accessions, PCA, Pisum sativum, Traits. Abstract The genetic diversity in 128 exotic pea accessions from diverse origin was determined for four qualitative traits flower color (FC), testa color (TC), cotyledon color (CC) and pod shape (PS) and eleven quantitative attributes i.e., plant height (PH), total pod number (TPN), number of pods per plant (NOPPP), total pod weight (TPW), pod weight per plant (PEPP), average pod length (APL), average pod width (APW), average pod thickness (APT), seed weight (SW), seed weight per plant (SWPP) and seed index (SI) through statistical software using a nonhierarchical, PCA. The projection of attributes on PC1 and PC2 revealed that average pod thickness, average pod length and average pod width are positively correlated to weight per pod. The projection pattern of the attributes on first two PCs depicted that key pod weight contributing attributes were pod thickness, length and width while the cotyledon color was opposite to weight per pod and other yield contributing traits on PC1, therefore, it had negative correlation with all other traits. The projection of accessions on first two PCs was useful to identify diverse groups of parents for better transgressive segregation. Promising accessions showing the variation in the desired parameters can be utilized in the future breeding programs. *Corresponding Author: Syed Amir Manzoor  amir.kzd@gmail.com Journal of Biodiversity and Environmental Sciences (JBES) ISSN: 2220-6663 (Print) 2222-3045 (Online) Vol. 4, No. 5, p. 321-328, 2014 http://www.innspub.net
  • 2. J. Bio. & Env. Sci. 2014 322 | Umar et al Introduction The pea (Pisum sativum L., 2n = 14) member of Papillonacea family is an annual cool season nitrogen fixing crop having high percentage of digestible protein (23-33%) along with other biomolecules such as carbohydrates and vitamins (Gatti et al., 2011). It is an important legume crop which is thought to be originated from Southwest Asia (Hulse, 1994). Being a self pollinated crop, main focus of breeding in recent times was to develop pure lines which led to narrow genetic diversity among pea varieties (Baranger et al., 2004). But a considerable level of genetic variance among peas of diverse origin has also be reported by some breeders (Nisar et al., 2011). In order to produce transgressive segregants, genetically different parents must to be selected for recombination breeding in self pollinated crops. The characterization of genetic diversity in crop species has long been based on morphological attributes, however, morphological variation is often found to be of limited use because the expression of morphological attributes may be affected by environmental conditions, thereby constraining the analysis of genetic variation (Nisar et al., 2008). On the basis of morphological data, genetic diversity assessments needs a high precision of field experiments through recommended design and analysis so that the germplasm may be exploited to develop better genotypes for the upcoming scenario (Sajjad et al., 2011). Knowledge of genetic diversity is a useful tool in gene bank management and in planning experiments, as it facilitates efficient sampling and utilization of germplasm by identifying and/or eliminating duplicates in the gene stock, and helps in the establishment of core collections (Ghafoor et al., 2005). In order to maintain, evaluate and utilize germplasm efficiently and effectively, it is important to investigate the extent of genetic diversity it contains (Smith et al., 1990). Many of the landraces and wild species are maintained in the world as genetic resources for crop improvement, but their use for breeding is still limited and we are challenged as to how to use this biodiversity for practical crop improvement (Ali et al., 2007). Broad based plant genetic resources are imperative for sound and successful crop improvement program (Jatoi et al., 2011). Unfortunately, the yield of pea is low in Pakistan as compared to the world average yield owing to the narrow genetic base and limited variability used in the development of local varieties. Crop improvement depends largely on the availability of diverse germplasm and their judicial utilization (Sardana et al., 2007). If we are dealing with a large number of genotypes, multivariate analytical techniques i.e., principal component analysis (PCA), principal coordinate analysis and cluster analysis at present are mostly utilized to asses’ genetic diversity present in the data set whether the data set comprises of biochemical, morphological or molecular data. Usually a nonhierarchical multivariate analysis technique, PCA, is employed by the plant breeders to check the pattern of variation in the given data. Therefore, the present study was undertaken to study the genetic diversity in exotic germplasm of pea accession of diverse origin and for the determination of extent of variation in the given accession for four qualitative traits and eleven quantitative attributes through statistical software using a nonhierarchical, PCA. Material and method Study area The experiment was conducted during autumn season in glass house condition in Plant Genetic Resource Institute (PGRI), National Agriculture Research Center (NARC), Islamabad (30° 42′ N and 37° 08′ E) Pakistan. Planting Material Pea germplasm used in this study consisting of 128 exotic accessions obtained from ICARDA gene bank. Origin of material was from various Western countries. Recommended plant production measures were adopted to raise the crop. Plant to plant distance was maintained at 6 inches (Table 1).
  • 3. J. Bio. & Env. Sci. 2014 323 | Umar et al Table 1. List of accessions and their origin. Accession # Origin country Accession # Origin country Accession # Origin country Accession # Origin country IG 50545 DEU IG 50754 NLD IG 50937 GBR IG 123040 ITA IG 50547 ETH IG 50777 SWE IG 50946 FRA IG 123091 ITA IG 50556 NLD IG 50782 NLD IG 50953 AS GBR IG 123092 ITA IG 50564 FRA IG 50785 NLD IG 50953 BR GBR IG 123094 ITA IG 50566 DEU IG 50788 BEL IG 50954 GBR IG 123131 COL IG 50580 RUS IG 50792 ETH IG 50955 USA IG 123208 CHN IG 50581 DEU IG 50805 FRA IG 50957 DEU IG 123308 KAZ IG 50591 UNK IG 50810 FRA IG 50958 USA IG 123317 PRT IG 50602 NLD IG 50818 DEU IG 50959 DEU IG 123336 MAR IG 50604 DEU IG 50820 DEU IG 50963 DEU IG 123349 TUR IG 50611 DEU IG 50821 USA IG 50978 POL IG 123356 CHL IG 50613 UKR IG 50828 GBR IG 50982 DEU IG 123451 ITA IG 50615 FRA IG 50830 BEL IG 50987 DEU IG 125371 RUS IG 50622 NLD IG 50836 DEU IG 51004 GBR IG 125379 BLR IG 50623 NLD IG 50837 DEU IG 51008 DEU IG 125407 BLR IG 50624 NLD IG 50838 DEU IG 51009 DEU IG 125410 SWE IG50625 NLD IG 50840 DEU IG 51016 USA IG 125413 RUS IG 50626 NLD IG 50845 PRT IG 51017 USA IG 125421 RUS IG 50632 DEU IG 50863 USA IG 51019 NLD IG 125439 ITA IG 50634 DEU IG 50870 DEU IG 51025 GBR IG 125448 RUS IG 50638 DEU IG 50871 DEU IG 51029 DEU IG 125461 RUS IG 50646 NLD IG 50878 GRC IG 51069 GBR IG 125470 GEO IG 50662 ROM IG 50898 GRC IG 51072 FRA IG 125525 AFG IG 50663 FRA IG 50903 DEU IG 51077 CHN IG 125556 ITA IG 50686 DEU IG 50905 GBR IG 51083 DEU IG 125593 ITA IG 50689 DEU IG 50907 DEU IG 51085 DEU IG 125614 RUS IG 50694 ETH IG 50910 DEU IG 51094 GBR IG 128865 CYP IG 50712 DEU IG 50920 USA IG 51097 CAN IG 128911 MNG IG 50730 CZE IG 50923 FRA IG 51100 SWE IG 129819 RUS IG 50733 GBR IG 50924 DEU IG 51103 UNK IG 128950 CHL IG 50734 SWE IG 50932 DEU IG 51128 FIN IG 129052 FIN IG 50735 BGR IG 50933 CZE IG 51133 FRA IG 1254116 Unknown Qualitative and quantitative attributes Observations were recorded on both qualitative attributes i.e., flower color (FC), testa color (TC), cotyledon color (CC) and pod shape (PS) and quantitative attributes i.e., plant height (PH), total pod number (TPN), number of pods per plant (NOPPP), total pod weight (TPW), pod weight per plant (PEPP), average pod length (APL), average pod width (APW), average pod thickness (APT), seed weight (SW), seed weight per plant (SWPP) and seed index (SI). Five samples of pod of each accession were taken for the data recording.
  • 4. J. Bio. & Env. Sci. 2014 324 | Umar et al Statistical analysis Mean data of each parameter viz., Mean (M), Variance (Var), and Standard deviation (Std. D) for average plant height (APH), number of pod (NOP), number of pod per plant (NOPPP), pod weight (PW), pod weight per plant (PWPP), seed weight (SW), seed weight per plant (SWPP), average pod length (APL), average pod width (APW), average pod thickness (APT), seed index (SI), was calculated and the data was subjected to analysis of variance (ANOVA) for simple statistics through SPSS (Version 6.0) PAST and Microsoft Excel 2007. Principal component analysis was carried out through Microsoft Excel 2007, SPSS v16.0 and PAST software to find the pattern of variation in the data. Results Morphological traits Morphological characteristics of 128 pea genotypes were determined on five randomly selected pods per genotype. Variability was observed among the accessions studied for qualitative attributes i.e., flower color (white and purple), testa color (green and creamy), cotyledon color (yellow and green) and pod shape (straight and curved). Traits frequency distributions revealed that accessions were predominantly vigorous. Frequency distribution of 128 pea germplasm for qualitative attributes is shown in (Table 5). High variation along with range was observed for most of the characters that indicated the scope of simple selection. The result of analysis of variance (ANOVA) revealed that the accession included in this study had significant variation for most of the traits as illustrated in (Table 3). Maximum variations were observed for cotyledon color, testa color and pod shape whereas minimum variations were recorded for flower color. Basic statistics including mean, standard deviation and variance have been presented in the. The extent of range for average plant height was 14.39-245.53 cm. Total number of pods per accession ranged from 2- 210. The range of number of pods per plant was 1-70. Pod weight of accessions ranged from 0.7-107 g while pod weight of each plant ranged from 0.45-47.63 g. The extent of range per seed weight accession was 0.4-90 g while seed weight per plant ranged from 0.3- 70.1 g. The range for average pod length, average pod width and average pod thickness was recorded from 1.73-8.55 cm, 0.2-0.9 cm and 0.2-0.8 cm respectively. The range for seed index was recorded from 8-31.3 (Table 2). Table 2. Basic statistical analysis of 11 quantitative traits of Pisum sativum germplasm Mean Standard error Standard deviation Sample variance Range Minimum Maximum APH (cm) 93.04302 4.783274 54.11657 2928.603 14.39 245.53 TPN 26.63281 2.59459 29.35444 861.683 2 210 NOPPP 15.85677 1.233895 13.95993 194.8796 1 70 PW (g) 18.75086 1.735965 19.6402 385.7375 0.71 107 PWPP (g) 11.27113 0.933075 10.55654 111.4405 0.45 47.63 SW (g) 15.49203 1.489706 16.8541 284.0608 0.44 90 SWPP (g) 9.466419 0.899909 10.18131 103.6591 0.31 70.12 APL (cm) 4.917459 0.101251 1.145529 1.312236 1.72 8.55 APW (cm) 0.49478 0.009917 0.112195 0.012588 0.17 0.85 APT (cm) 0.612728 0.009267 0.104842 0.010992 0.20 0.81 SI 17.90914 0.465629 5.267987 27.75168 8 31.3
  • 5. J. Bio. & Env. Sci. 2014 325 | Umar et al Table 3. Analysis of variance (ANONA) Source of Variation SS Df MS F P-value F crit Between Groups 973650.3 14 69546.45 213.7604 0 1.697004 Within Groups 614907.2 1890 325.3477 Total 1588558 1904 Principal component analysis Out of 15 principal components (PCs), first 5 exhibited eigenvalue greater than 1 (significant) while the rest of 10 PCs exhibited non significant variation so they were not worth interpreting (Table 4). The first 5 PCs showed 79.406% variation in the accession. The first PC accounted 40.298% variation, second PC showed 15.027% variation, third PC showed 9.664% variation, fourth PC accounted for 6.925% variation while fifth PC accounted for 5.987% variation (Figure 1). The first PC was highly related to weight per pod, seed weight, pod weight, seed weight per pod, number of pods per plant and total pod number, average pod thickness, average pod length and average width. This implies that PC1 is a weighted average of these nine attributes. The traits of significant importance in PC2 were average pod thickness, average pod length, average width and seed index. PC3 was related to cotyledon color and testa color. The fourth PC was related to average plant height and pod shape while the fifth PC was related to flower color (Table 5). The projection of attributes on PC1 and PC2 revealed that average pod thickness, average pod length and average pod width are positively correlated to weight per pod. The projection pattern of the attributes on first two PCs depicted that key pod weight contributing attributes were pod thickness, length and width. Cotyledon color was opposite to weight per pod and other yield contributing traits on PC1, therefore, it had negative correlation with all other attributes. The projection of accessions on first two PCs was useful to identify diverse groups of parents for better transgressive segregation (Figure 2). The projection of accessions on first 2 PCs showed population structure and illustrated the identified hetrotic accessions. The accession IG_50547 was most distinct and variant among rest of all. Accession IG_51094, IG_123451 and IG_50566 were opposite to accession IG_51128, IG-123040 and IG_125448. The genotype IG_123208 was contrasted to accession IG_125439. IG_128950 was opposite to IG_125470 etc. On the basis of this analysis, promising genotypes have been identified and these are suggested to use in genetic improvement through selection or involving these in hybrid program for crop improvement (Figure 3). Table 4. Eigen value and % variance PC Eigen value % Variance PC Eigen value % Variance PC Eigen value % Variance 1 6.0447 40.298 6 0.898085 5.9872 11 0.217124 1.4475 2 2.25404 15.027 7 0.678066 4.5204 12 0.0747416 0.49828 3 1.44956 9.6638 8 0.453869 3.0258 13 0.061935 0.4129 4 1.12389 7.4926 9 0.362197 2.4146 14 0.00869331 0.057955 5 1.03875 6.925 10 0.334112 2.2274 15 0.00023018 0.0015345
  • 6. J. Bio. & Env. Sci. 2014 326 | Umar et al Table 5. Principal components for fifteen attributes Traits Eigen values PC1 PC2 PC3 PC4 PC5 Weight/ Pod 0.931 -.077 0.020 -0.074 -0.102 Seed Weight 0.920 -0.183 0.192 0.085 -0.048 Pod Weight 0.915 -0.174 0.254 0.099 -0.015 Seed weight/ Pod 0.867 -0.085 -0.064 -0.082 -0.150 Number of Pods per Plant 0.861 -0.323 0.082 -0.166 -0.034 Pod Number 0.813 -0.366 0.280 0.005 0.071 Average Pod Thickness 0.557 0.490 -0.247 0.207 0.122 Average Pod Length 0.572 0.739 -0.010 0.015 -0.007 Average Pod Width 0.535 0.723 0.021 -0.044 -0.020 Seed Index 0.332 0.577 -0.265 0.227 0.054 Testa Color 0.211 -0.327 -0.744 0.087 -0.348 Cotyledon Color -0.437 0.311 0.672 0.057 -0.120 Average Plant Height -0.017 -0.129 0.278 0.802 -0.201 Flower Color 0.155 0.171 0.183 -0.536 0.027 Pod Shape 0.218 -0.218 -0.106 0.172 0.896 Table 6. Frequency distribution of qualitative traits S. No Traits Frequency Frequency % 1 Flower Color i) White ii) Purple 121 7 94.5 5.5 2 Testa Color i) Green ii) Creamy 104 24 81.2 18.8 3 Cotyledon color i) Yellow ii) Green 55 73 43 57 4 Pod Shape i) Straight ii) Curved 105 23 82 18
  • 7. J. Bio. & Env. Sci. 2014 327 | Umar et al Fig. 1. Scree plot between eigen values and number of principal components Fig. 2. Principal component biplot of yield traits IG_50545 IG_50547 IG_50556 IG_50564 IG_50566 IG_50580 IG_50581 IG_50591 IG_50602 IG_50604 IG_50611 IG_50613 IG_50615IG_50622 IG_50623 IG_50624 IG50625IG_50626 IG_50632 IG_50634 IG_50638 IG_50646 IG_50662 IG_50663 IG_50686 IG_50689 IG_50694 IG_50712 IG_50730 IG_50733IG_50734 IG_50735IG_50754 IG_50777 IG_50782 IG_50785 IG_50788 IG_50792 IG_50805 IG_50810 IG_50818 IG_50820 IG_50821 IG_50828 IG_50830 IG_50836 IG_50837 IG_50838 IG_50840 IG_50845 IG_50863 IG_50870 IG_50871 IG_50878 IG_50898 IG_50903 IG_50905IG_50907 IG_50910 IG_50920 IG_50923 IG_50924 IG_50932 IG_50933 IG_50937 IG_50946 IG_50953_AS IG_50953_BR IG_50954 IG_50955 IG_50957 IG_50958 IG_50959IG_50963 IG_50978 IG_50982 IG_50987 IG_51004 IG_51008IG_51009 IG_51016 IG_51017 IG_51019 IG_51025 IG_51029 IG_51069 IG_51072 IG_51077 IG_51083 IG_51085 IG_51094 IG_51097 IG_51100 IG_51103 IG_51128 IG_51133 IG_123040 IG_123091IG_123092 IG_123094 IG_123131 IG_123208 IG_123308 IG_123317 IG_123336IG_123349 IG_123356 IG_123451 IG_125371 IG_125379 IG_125407 IG_125410IG_125413 IG_125421 IG_125439 IG_125448 IG_125461 IG_125470 IG_125525IG_125556 IG_125593 IG_125614 IG_128865 IG_128911 IG_129819 IG_128950 IG_129052 IG_1254116-1.8 -1.2 -0.6 0.6 1.2 1.8 2.4 3.0 3.6 Principal Component 1: 40.298% -4.0 -3.2 -2.4 -1.6 -0.8 0.8 1.6 2.4 PrincipalComponent2:15.027% Fig. 3. Two dimensional ordinations of 128 pea accessions on PC1 and PC2 Discussion Phenotypic characterization is the first step towards the classification of crop germplasm (Nisar et al., 2008), the outcome of this study revealed that there is immense diversity in the present exotic pea germplasm. Considerable degree of allelic variation was observed for flower color, cotyledon color and seed surface as well. All these parameters are of much importance for description of the genotypes. As the quantitative traits are economically more important and are generally used for the improvement of the crop. Similar results were obtained by (Nisar et al., 2008). Analysis showed that high degrees of variations were observed for average plant height, number of pods, number of pods per plant per accession, pod weight per plant, seed weight per accession and seed weight per pod, our results are in agreement with the findings of (Ali et al., 2007) which described pod length showed low degree of variations similarly our results are in agreement with findings of (Ali et al., 2007). Whereas contrasting results were obtained by (Gritton, 1980) and (Duke, 1981) reported that pod length range from 4 to15cm. Pod width and pod thickness showed a very narrow genetic background, our results are in disagreement with the findings of (Ali et al., 2007) which may due to the exotic nature of germplasm in the same climate. Number of pods per plant showed high degree of diversity and can be used directly for the improvement of the crop. The results are in accordance with the findings of (Ali et al., 2007) which observed the consistency of the diversity of the trait in the pea germplasm. 100 seed weight exhibited low degree of variations; our results are in agreement with findings of (Duke, 1981). References Ali Z, Qureshi AS, Ali W, Gulzar H, Nisar M, Ghafoor A. 2007. Evaluation of genetic diversity present in pea (Pisum sativum L.) germplasm based on morphological traits, resistance to powdery mildew and molecular characteristics. Pakistan Journal of Botany 39: 2739-2747. Baranger A, Aubert G, Arnau G, Lainé A, Deniot G, Potier J. 2004. Genetic diversity within Pisum sativum using protein-and PCR-based markers. Theoretical and Applied Genetics 108: 1309-1321.
  • 8. J. Bio. & Env. Sci. 2014 328 | Umar et al Duke JA. 1981. Handbook of legumes of world economic importance. P, 71. Gatti I, Espósiton M, Almirón P, Cravero V, Cointry E. 2011. Diversity of pea (Pisum sativum) accessions based on morphological data for sustainable field pea breeding in Argentina. Genetics and Molecular Research 10: 3403-3410. Ghafoor A, Ahmad Z, Anwar R. 2005. Genetic diversity in Pisum sativum and a strategy for indigenous biodiversity conservation. Pakistan Journal of Botony 37: 71-77. Gritton ET. 1980. Field pea, hybridization of crop plants. P. 347. Hulse J. 1994. Nature, composition, and utilization of food legumes. Expanding the production and use of cool season food legumes. Journal of Food, Agriculture and Environment. 13: 77-97. Jatoi SA, Javaid A, Iqbal M, Sayal OU, Masood MS, Siddiqui SU. 2011. Genetic diversity in radish germplasm for morphological traits and seed storage proteins. Pakistan Journal of Botony. 43: 2507-2512. Nisar M, Ghafoor A, Ahmad H, Khan M, Qureshi A, Ali H. 2008. Evaluation of genetic diversity of pea germplasm through phenotypic trait analysis. Pakistan Journal of Botony. 40: 2081-2086. Nisar M, Ghafoor A, Khan M. 2011. Phenotypic variation in the agronomic and morphological traits of Pisum sativum L. germplasm obtained from different parts of the world. Russian Journal of Genetics. 47: 19-25. Sajjad M, Khan S, Khan AS. 2011. Exploitation of germplasm for grain yield improvement in spring wheat (Triticum aestivum). International Journal of Agriculture and Biology. 13: 695-700. Sardana S, Mahajan R, Gautam N, Ram B. 2007. Genetic variability in pea (Pisum sativum L.) germplasm for utilization. SABRAO Journal of Breeding and Genetics 39: 31-41. Smith O, Smith J, Bowen S, Tenborg R, Wall R.1990. Similarities among a group of elite maize inbreds as measured by pedigree, F1 grain yield, grain yield, heterosis, and RFLPs. Theoretical and Applied Genetics 80: 833-840.