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How infectious is COVID-19?

Basic case reproduction number R0
Average number of secondary cases per case (number of successful
transmissions per case) in a totally susceptible population.
Basic case reproduction number R0
Average number of secondary cases per case (number of successful
transmissions per case) in a totally susceptible population.
R0 > 1 number of cases increases
Basic case reproduction number R0
Average number of secondary cases per case (number of successful
transmissions per case) in a totally susceptible population.
R0 > 1 number of cases increases
R0 = 1 number of cases is stable
Basic case reproduction number R0
Average number of secondary cases per case (number of successful
transmissions per case) in a totally susceptible population.
R0 > 1 number of cases increases
R0 = 1 number of cases is stable
R0 < 1 number of cases decreases
Epidemic curve
China CDC weekly Feb 17 2020
http://weekly.chinacdc.cn/en/article/id/e53946e2-c6c4-41e9-9a9b-fea8db1a8f51
R0 for COVID-19
Estimates between 1.5 and 4.5, most 2-3
R0 for COVID-19
Estimates between 1.5 and 4.5, most 2-3
What does this mean?
… in the early stage of the epidemic
… using available data
… in Wuhan
… on average
Difficulty in estimating R0 

China CDC weekly Feb 17 2020
R0 depends on 3 factors
• duration of infectiousness
• probability of infection being transmitted during contact
between a susceptible and infected individual
• average rate of contact between susceptible and infected
individuals
R0 depends on 3 factors
• duration of infectiousness
• probability of infection being transmitted during contact
between a susceptible and infected individual
• average rate of contact between susceptible and infected
individuals
Infectious organism (& host)
R0 depends on 3 factors
• duration of infectiousness
• probability of infection being transmitted during contact
between a susceptible and infected individual
• average rate of contact between susceptible and infected
individuals
Population
R0
R0 for COVID-19 ≈ 1.5-4.5
R0
R0 for COVID-19 ≈ 1.5-4.5
R0 for Measles ≈ 15
R0 for Chickenpox ≈ 10
R0 for SARS ≈ 3
R0 for Ebola ≈ 2
R0 for ‘flu ≈ 1.5-3
Secondary attack rate
Secondary attack rate (2o AR) is used in the study of the spread of
infections that transmit person-to-person in specific situations like
households and schools
Secondary attack rate
Secondary attack rate (2o AR) is used in the study of the spread of
infections that transmit person-to-person in specific situations like
households and schools
= the proportion of those exposed to the primary case that
develop disease as a result of the exposure
Secondary attack rate of SARS
Singapore
Number of household members exposed to cases = 417
No. of new cases arising = 26
Secondary attack rate = 26/417 = 6.2%
NB: Secondary attack rate is context specific
Depends on:
Closeness of contact
SARS in Beijing 2o AR higher in those caring for patient (31%) than
living in same residence (4.6%)
Stage of illness
SARS:
2o AR higher in hospital than at home – due to stage of illness?
R0 and 2o AR
R0 Average number of secondary cases per case in a totally
susceptible population

2o AR The proportion of those exposed to the primary case that
develop disease as a result of the exposure in a particular situation
R0 and 2o AR
R0 Average number of secondary cases per case in a totally susceptible population
2o AR The proportion of those exposed to the primary case that develop disease as a
result of the exposure in a particular situation
R0 = 2o AR [household] x no. of contacts [household]
+
2o AR [other family] x no. of contacts [other family]
+
2o AR [community] x no. of contacts [community]
+
etc

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COVID-19 How to calculate Reproduction Number (Ro)

  • 1. How infectious is COVID-19?

  • 2. Basic case reproduction number R0 Average number of secondary cases per case (number of successful transmissions per case) in a totally susceptible population.
  • 3. Basic case reproduction number R0 Average number of secondary cases per case (number of successful transmissions per case) in a totally susceptible population. R0 > 1 number of cases increases
  • 4. Basic case reproduction number R0 Average number of secondary cases per case (number of successful transmissions per case) in a totally susceptible population. R0 > 1 number of cases increases R0 = 1 number of cases is stable
  • 5. Basic case reproduction number R0 Average number of secondary cases per case (number of successful transmissions per case) in a totally susceptible population. R0 > 1 number of cases increases R0 = 1 number of cases is stable R0 < 1 number of cases decreases
  • 6. Epidemic curve China CDC weekly Feb 17 2020 http://weekly.chinacdc.cn/en/article/id/e53946e2-c6c4-41e9-9a9b-fea8db1a8f51
  • 7. R0 for COVID-19 Estimates between 1.5 and 4.5, most 2-3
  • 8. R0 for COVID-19 Estimates between 1.5 and 4.5, most 2-3 What does this mean? … in the early stage of the epidemic … using available data … in Wuhan … on average
  • 9. Difficulty in estimating R0 
 China CDC weekly Feb 17 2020
  • 10. R0 depends on 3 factors • duration of infectiousness • probability of infection being transmitted during contact between a susceptible and infected individual • average rate of contact between susceptible and infected individuals
  • 11. R0 depends on 3 factors • duration of infectiousness • probability of infection being transmitted during contact between a susceptible and infected individual • average rate of contact between susceptible and infected individuals Infectious organism (& host)
  • 12. R0 depends on 3 factors • duration of infectiousness • probability of infection being transmitted during contact between a susceptible and infected individual • average rate of contact between susceptible and infected individuals Population
  • 13. R0 R0 for COVID-19 ≈ 1.5-4.5
  • 14. R0 R0 for COVID-19 ≈ 1.5-4.5 R0 for Measles ≈ 15 R0 for Chickenpox ≈ 10 R0 for SARS ≈ 3 R0 for Ebola ≈ 2 R0 for ‘flu ≈ 1.5-3
  • 15. Secondary attack rate Secondary attack rate (2o AR) is used in the study of the spread of infections that transmit person-to-person in specific situations like households and schools
  • 16. Secondary attack rate Secondary attack rate (2o AR) is used in the study of the spread of infections that transmit person-to-person in specific situations like households and schools = the proportion of those exposed to the primary case that develop disease as a result of the exposure
  • 17. Secondary attack rate of SARS Singapore Number of household members exposed to cases = 417 No. of new cases arising = 26 Secondary attack rate = 26/417 = 6.2%
  • 18. NB: Secondary attack rate is context specific Depends on: Closeness of contact SARS in Beijing 2o AR higher in those caring for patient (31%) than living in same residence (4.6%) Stage of illness SARS: 2o AR higher in hospital than at home – due to stage of illness?
  • 19. R0 and 2o AR R0 Average number of secondary cases per case in a totally susceptible population
 2o AR The proportion of those exposed to the primary case that develop disease as a result of the exposure in a particular situation
  • 20. R0 and 2o AR R0 Average number of secondary cases per case in a totally susceptible population 2o AR The proportion of those exposed to the primary case that develop disease as a result of the exposure in a particular situation R0 = 2o AR [household] x no. of contacts [household] + 2o AR [other family] x no. of contacts [other family] + 2o AR [community] x no. of contacts [community] + etc