The document discusses different types of cell surface receptors involved in cell signaling. It describes ion channel-linked receptors, which allow ions to pass through the cell membrane upon ligand binding. Enzyme-linked receptors are also discussed, including receptor tyrosine kinases, tyrosine kinase-associated receptors, and receptor serine/threonine kinases. Key signaling pathways downstream of these receptors are mentioned, such as Ras-MAPK, PI3K-Akt, JAK-STAT, and TGF-beta pathways. The document provides an overview of the major receptor types and some of their associated intracellular signaling cascades involved in cell-cell communication.
The forth lecture about the "Cell".
Here, I am discussing the several signaling pathways.....It is highly dependent on the 3rd lecture; Receptors.
Enjoy :)
The forth lecture about the "Cell".
Here, I am discussing the several signaling pathways.....It is highly dependent on the 3rd lecture; Receptors.
Enjoy :)
The presentation aims to provide basics of bio signalling to the viewers. The various mechanisms of signalling in cells along with the details about G signalling are covered under this ppt.
cell signaling is part of any communication process that governs basic activities of cells and coordinates multiple-cell actions. The ability of cells to perceive and correctly respond to their microenvironment is the basis of development, tissue repair, and immunity, as well as normal tissue homeostasis
GENERAL IDEA OF SIGNAL TRANSDUCTION
DEFINATION
WHAT DOES THE TERM SIGNAL TRANSDUCTION MEANS
HISTORY
BASIC ELEMENTS IN SIGNAL TRANSDUCTION
TYPES OF SIGNAL TRANSDUCTION
SIGNALLING MOLECULE
RECEPTOR MOLECULE
MODES OF CELL CELL SIGNALING
SECOND MESSENGER
SIGNAL TRANSDUCTION PATHWAY
SOME SIGNALING PATHWAYS
SIGNIFICANCE
CONCLUSION
REFERENCE
Types of Receptors
Receptors are protein molecules in the target cell or on its surface that bind ligands. There are two types of receptors: internal receptors and cell-surface receptors.
MAPK Signaling pathway (Mitogen-activated protein kinase), how the pathway helps in regulation of mitosis, It's activation and inactivation inside the cell, roles of MAPK pathway in cancerous cell, different classes of MAP kinase in human
The presentation aims to provide basics of bio signalling to the viewers. The various mechanisms of signalling in cells along with the details about G signalling are covered under this ppt.
cell signaling is part of any communication process that governs basic activities of cells and coordinates multiple-cell actions. The ability of cells to perceive and correctly respond to their microenvironment is the basis of development, tissue repair, and immunity, as well as normal tissue homeostasis
GENERAL IDEA OF SIGNAL TRANSDUCTION
DEFINATION
WHAT DOES THE TERM SIGNAL TRANSDUCTION MEANS
HISTORY
BASIC ELEMENTS IN SIGNAL TRANSDUCTION
TYPES OF SIGNAL TRANSDUCTION
SIGNALLING MOLECULE
RECEPTOR MOLECULE
MODES OF CELL CELL SIGNALING
SECOND MESSENGER
SIGNAL TRANSDUCTION PATHWAY
SOME SIGNALING PATHWAYS
SIGNIFICANCE
CONCLUSION
REFERENCE
Types of Receptors
Receptors are protein molecules in the target cell or on its surface that bind ligands. There are two types of receptors: internal receptors and cell-surface receptors.
MAPK Signaling pathway (Mitogen-activated protein kinase), how the pathway helps in regulation of mitosis, It's activation and inactivation inside the cell, roles of MAPK pathway in cancerous cell, different classes of MAP kinase in human
Cell signalling through MAP-Kinase and JAK STAT pathway.pptxSonalShrivas
Cell signaling is a complex process by which cells communicate with each other to regulate various cellular activities, including growth, differentiation, metabolism, and apoptosis (cell death). Signaling molecules, such as hormones, growth factors, and neurotransmitters, bind to specific receptors on the cell surface or inside the cell, initiating a cascade of events that ultimately lead to a cellular response. There are several signaling pathways involved in cell signaling, including the Ras-MAPK pathway and the JAK-STAT pathway.
Both the Ras-MAPK pathway and the JAK-STAT pathway are critical for normal cellular function, and dysregulation of these pathways can lead to various diseases, including cancer and inflammatory disorders.
Molecular interaction, Regulation and Signalling receptors and vesiclesAnantha Kumar
1. Overview of Extracellular signalling
2. Signalling molecules operate over various distance in animals
3.Endocrine Signalling
4.Paracrine Signalling
5.Autocrine Signalling
6. Signalling by Plasma membrane attached proteins
7.Receptors
8 Properties of receptors
9.Cell surface receptors belong to four major classes
10.Signal transduction Mechanism
11. Second messenger
12. Contraction of skeletal Muscle cells mechanism
In biology, cell signaling is part of any communication process that governs basic activities of cells and coordinates multiple-cell actions. The ability of cells to perceive and correctly respond to their microenvironment is the basis of development, tissue repair, and immunity, as well as normal tissue homeostasis.
The signal transduction pathway uses a network of interactions within cells, among cells, and throughout plant.
The external signals that affect plant growth and development include many aspects of the plant’s physical, chemical, and biological environments. Some external signals come from other plants.
Many signals interact cooperatively and synergistically with each other to produce the final response. Signal combinations that induce such complex plant responses include red and blue light, gravity and light, growth regulators and mineral nutrients .
For example the overall regulation of seed germination involves control by both external factors and internal signals.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
This presentation explores a brief idea about the structural and functional attributes of nucleotides, the structure and function of genetic materials along with the impact of UV rays and pH upon them.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
1. CCELL CELL SIGNALING
[ION CHANNEL LINKED RECEPTOR
&
ENZYME LINKED RECEPTOR]
Guided by
Dr. Niraj Agarwal Sir.
Presented by
Ritima Mishra
Msc 3rd sem
Roll No. -25
2. INTRODUCTION
What is cell signaling?
All cells receive and respond to
signals from their surroundings.
Signaling molecules, which are
released by signal producing cells,
reach and transfer biological signals to
their target cells to initiate specific
cellular responses.
Stages of cell signaling
Receiving.
Transduction
Response.
What is ligand ?
ligands are signaling
molecule.
Produced by signal producing
cell to generate response n
target cell.
Ligands may be–
cytokine hormone
steroid Growth factor.
polypeptide
What is receptor?
Receptors are Glycoprotein
on the cell surface.
Receptor helps to receive the
signals from outside and
generate responses
intracellularly.
5. Ion Channel Linked Receptor
Also known as cell membrane bound receptor, Ligand gated channel,
transmitter gated ion channel, ionotropic receptor.
Here receptor is multipass protein.
Ion channel linked receptor bind a ligand and open a channel through the
membrane that allows specific ions to pass through.
Mechanism –
When a ligand bind with the extracellular region of the channel there is a
conformational change in the protein structure that allows ions such as
Na+,Ca+,Mg+,K+ and H+ to pass through.
6. For example- Ligand gated channel for NTM Acetylcholine.
NTM or peptide hormone can act as a ligand.
As two molecules of acetylcholine binds with the receptor .
The conformation of the receptor changed and gate is open, allows
the entry of many ions(cations specially) and small molecule.
7. ENZYME LINKED RECEPTOR
Enzyme linked receptor are second major type of cell surface receptor.
are single pass membrane protein.
Having their ligand binding site outside the cell and their catalytic side inside.
Great majority are protein kinases.(associated or itself a protein kinase).
Kinases can phosphorylate specific protein in the target cell which again can
phosphorylate downstream proteins .
An enzyme linked receptor also known as catalytic receptor , is a transmembrane
receptor.
Wherer the binding of an extracellular ligand causes enzymatic activity on the
intracellular side.
8. • Receptor may have –
i)The receptor with intracellular
domain that are associated with
an enzyme.
ii)The receptor with intracellular
domain that itself act as an
enzyme.
9. There are 3 types of enzyme –linked receptor --
-
i)Receptor –Tyrosine kinase.
ii)Tyrosine-Kinase associated receptor .
iii)Receptor Serine/ Threonine kinase.
10. i) Receptor Tyrosine kinase-
Receptor tyrosine kinases (RTK) are the high affinity cell surface receptor for
many polypeptides( growth factor , cytokinine and hormones).
Receptor tyrosine kinase have been shown not only to be key regulator of
normal cellular processess but also have a critical role in the development and
progression of many types cancer.
Mutation in receptor protein kinase leads to activation of receptor in absence
of ligand also and effect protein expression.
Kinase enzymes that specifically phosphorylate the amino acid, tyrosine, termed
as tyrosine kinase.
Ligand for RTK-
Nerve growth
factor
Platelet growth
factor
Fibroblast
Growth Factor
Hepatocyte
growth factor
Insulin growth
factor
Epidermal
growth factor
12. Mode of action of RTK-
When a growth factor binds to the extracellular domain of RTK,
dimerization happen with the adjacent RTK.
Which enables the two cytoplasmic domains to cross phosphorylate the
tyrosine residue of each other .
This cross phosphorylation is called autophosphorylation.
13. • There are 3 major pathways can transduce a
signal from activated RTK:-
1.Ras-MAP kinase (MAPK also called as ERK-Extracellular signal
regulated kinase)
2.IP3/DAG Pathway.
3.PI-3 kinase pathway/AKT
a.mTOR
b.Insulin signaling.
14. What is a Ras?
• Belongs to GTPase family.
• Ras is monomeric g –protein(GTPase)
switch protein.
• Ras is a guanosine-nucleotide –
binding protein.
• Ras has intrinsic GTPase activity.
• Which means that protein on its own
will hydrolyze a bound GTP molecule
into GDP.
• When Ras is active,it turn on genes
involved in cell growth,differentiat-
- ion and survival.
• It anchored in the plasmamembrane.
• Mutation of it can cause cancer.
What is MAP kinase?
•MAPK-Mitogen –
activating protein kinase .
•It is a type of protein
kinase that is specific to the
amino acids serine and
threonine.
18. • Some important terms of
IP3-DAG
Pathway IP3- Inositol 1,4,5 triphosphate.
PIP2-Phosphotidylinositol 4,5 –
biphosphate.
DAG-Diacylglycerol.
PKC-Protein Kinase C.
20. • Some important terms of PI-3-Kinase
pathway
PI-3:- Phosphatidylinositol 3 Kinase.
PIP2:-Phosphatidylinositol-4,5-
biphosphate
PIP3:-Phosphatidylinositol -3,4,5-
biphosphate
PKB:-Protein Kinase B.
PDK-pkb Dependent Kinase 2
21. i) 1- mTOR pathway:-
mTOR- Mammalian Target of Rapamycin.
Extracellular signal require for the animal cell to grow ,divide and
survive.
TOR- serine threonine kinase.
Tor has two multiprotein complex-
Complex 1(mTORC1)
It has Raptor protein.
Sensitive to Rapamycin
.
mTORC1 promote protein
synthesis by phosphorylating
the eIF4E-Binding Protein by
making the Eif4e free for
translation.
Complex2 (mTORC2)
It has Rictor protein.
Insensitive to Rapamycin.
Rictor help in activation of
AKT and it regulate the
actin cytoskeleton via Rho
family GTPase.
22. • mTOR Pathway-
If extracellular growth
factor on RTK.
Activate PIP-3 Kinase.
Activate AKT/PKB
Activate mTORc1
TSC-2(GAP)
Rheb-GTP
Add phosphate at
eIF4E-BP
eEF4E active Protein synthesis
23. ii)Insulin signaling pathway-
It’s a type of peptide hormone secreted by pancreati cells (β-langerhans
cells).
Receptor of Insulin- Dimer (Inactive) and tetramer(active).
Insulin receptor synthesis to maintain the blood glucose level.
The receptor of insulin may present at liver,muscles,adipose tissue(store
glucose).
Insulin signaling pathway – Ras dependent
Ras independent.
25. ii)Tyrosine kinase associated receptor –
Rather than processing intrinsic enzymatic activity,many enzymes linked
receptor act by stimulating intracellular protein tyrosine kinase with which
they are non-covalently associated.
N terminal –Ligand binding domain.
C terminal –cytosolic domain of the tyrosine kinase associated with
receptor get activated after binding with ligand.
Enzyme cytosolic tyrosine kinase—JAK (Janus kinase).
Maximum receptor are antigen ,peptide,(GH, prolactin),interlukins.
27. • Some important terms of JAK-STAT pathway-
JAK:-Janus kinase.
STAT:-Signal Transducer and Activator
of Transcription.
28. iii)Receptor Serine/Threonine kinase-
These receptors are single pass transmembrane protein.
There are two classes of serine/threonine kinase of receptor-TypeI
-TypeII
Ligands are- TGF-β, BMPs ,Activins.
This receptor donot active in homodimer form active in heterodimer form.
Protein from this group participate in 7 metabolic pathways-
1.MAPK 2.Cytokine –cyt receptor interaction. 3.TGF-β 4.Adhrens junction.
5.Colorectal cancer. 6.pancreatic cancer. 7.Chronic myeloid leukemia.
30. • Some important terms of Serine/ thr kinase
Receptor
Pathway
SMAD:-mediators of TGF-β
signal transduction.
31. Conclusion
A signal is an entity that codes or conveys information.
The ability of cells to perceive and correctly respond to their
microenvironment is the basis of development, tissue repair,
and immunity as well as normal tissue homeostasis.
Errors in signaling interactions and cellular information
processing may cause diseases such as cancer, autoimmunity
and diabetes.