Both influenza virus and (IFV), and Measles Virus (MV) are enveloped viruses with class I fusion glycoproteins. Experimental exposure to low pH (5.5) buffer will inactivate IFV, but not MV. Based on this information, What can you infer about the entry pathways and mechanism of two viruses? Solution Entry of virus in the host membrane includes a number of steps. The entry pathway of Influenza virus is influenced by a fusion protein termed as hemagglutinin. It is a trimeric glycoprotien present in multiple copies in the membrane envelope of influenza virus. The structure of hemagglutinin contains a receptor binding sites, fusion peptide, a metastable structure motif, and the transmembrane domain. For the entry of IFV the first step involves the recognition of the host cell receptor molecules , terminal sialic acid by hemagglutinin. The attachment is multivalent in nature as the multiple copies of trimetric hemagglutinin gets attached with the receptors on the membrane and triggers endocytosis of the IFV. The virus is trapped in endosome and moves via a unidirectional pathway towards nucleus of the host cell. At this position the pH of the endosome become acidic and induces a dramatic conformational change in hemagglutinin to insert the fusion protein into the host membrane (nucleus). It induces a juxtaposition of the two membrane and forms a fusion pore that allows the release of the genome segment in the of the IFV. The genome then undergoes translation in host cells and thus develop protein and in turns shows symptoms of disease. At low pH the hemagglutinin of IFV undergoes a conformational change which results in exposure of a hydrophobic segment of the molecule which is crucial to expression of viral fusion activity and thus inactivate the entry of the virus. For optimal expression of fusion activity the virus must bound to the target membrane before exposure to low pH. In case of measles virus (MV), like other paramyxoviruses (those which have single stand RNA which are used as template for mRNA synthesis), for the fusion both the fusion protein (F) and hemagglutinin (H) are required. These proteins are found on the viral surface in a regular array of tightly packed spikes H tetramers and F timers. H proteins recognizes the receptors on the target membrane as well as help the F protein in the fusion process which involves the insertion of hydrophobic fusion peptide in the cell membrane. Unlike IFV, MV uses single protein , the regulator of complement activation CD46 as its main receptors. CD46 is a type 1 transmembrane protein which is expressed in four isoform. MV enters a cell by pH independent membrane fusion at the cell surface. Binding of the H protein is believed to induce conformational change of the H protein as well as that of the F proteins. The hydrophobic fusion peptide inside the F protein is then exposed and inserted into the plasma membrane of the target cell. The structural changes of the F protein then induce fusion of vir.