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© 2016© 2016
A Practical Approach to Analyzing
Healthcare Data
Chapter 3 – Tools for Data
Organization, Analysis, and
Presentation
© 2016
Data Organization Using
Databases
• Healthcare data is complex and often multi-
dimensional
– Provider
– Patients
– Insurance companies
– Services
• Providing an organizational structure for the data can
facilitate more efficient analysis and reporting
• Database – self-describing collection of integrated
records.
– Self-describing – contains a description of its own structure
– Integrated – data elements are related to each other
© 2016
Database Vocabulary
• Tables- two dimensional arrays of data
– Rows = records
– Columns = variables or attributes
• RDMS – Relational Database Management System
– Software that is used to hold and maintain data tables and
their relationships
• SQL – Structured Query Language
– Programming language used to communicate with a
relational database
• ERD – Entity Relationship Diagram
– Diagram that shows how tables in an RDMS relate
© 2016
Small-Scale Databases
• Microsoft Access
– Relational database management system (RDMS)
– Strengths
• Approachable for inexperienced database users
• Graphical user interface (GUI)
• Built in wizards for table, query and report design
• Supports integrated forms for data collection
– Weaknesses
• Multi-user support is difficult to implement
• Database size limited to 2GB
• Most ‘classic’ Database Administrators (DBAs) do not
consider Access to be a full blown RDMS
© 2016
Hierarchy of a Relational Database
• Tables are rows and columns of values
– Envision a tab in a spreadsheet
• Fields are the columns in a spreadsheet
– In a patient database, fields may be age, gender, admission date, etc.
• Data elements or records are the rows in a spreadsheet
– In a patient database, row may represent patients or services provided to patients
• A unique row identifier in a table is called the primary key
– Cannot be duplicated within the same table
– Used to link tables together
© 2016
Entity Relationship Diagram
• Diagram that displays the relationships between tables within a RDBMS
• The key fields are identified as well as the cardinality of the relationship between the
tables
• Cardinality
– One – to – one
– One – to – many
• In Figure A.1
– PatientID is the primary key in the Patient Info table and a secondary key in the Visits table
– The cardinality of the relationship between the table is one to many.
• Each patient may have many visits
© 2016
More About Cardinality
© 2016
Data Dictionary
• Details roadmap of the database
• Should include
– Name of computer or software program that
contains the data element
– Type of data in the field
– Length of data in the field
– Edits placed on the data field
– Values allowed to be placed in the data field
– A clear definition of each value
© 2016
Structured Query Language
• SQL
• Tool to use and maintain databases
– Select data
– Update data
– Insert rows into a table
– Delete rows from a table
© 2016
SQL Example
• Retrieve the records for all patients
from Milwaukee
– SELECT PATIENT_LNAME,
PATIENT_FNAME FROM PATIENT
WHERE PATIENT_CITY = ‘Milwaukee’
• Key words in the query are in red font
© 2016
Statistical Software Packages
• Statistical Package for the Social Sciences
(SPSS)
– Menu driven program
– More suited for smaller (<1G) datasets
– May open Excel files for analysis
• Statistical Analysis System (SAS)
– Command line program
– Excellent for manipulating large datasets
© 2016
SAS Syntax
• SAS is a programming language much like
SQL
– Key words:
• Data – used to name and create a dataset
• Proc – declare which analytic procedure will be used
• Set – declare which dataset will be the subject of the
analysis
• Run – designates the end of the command and starts
the calculation
– Syntax: always end commands with a ‘;’
© 2016
Role of Excel – Data Analysis
• Data analysis
– Data analysis toolpak add-in
– Must be careful importing text data elements
that appear to be numeric
• ICD-9 codes with leading zeroes
• Variables with mixed number and alpha values
• Pivot tables are also an excellent
exploratory data analysis tool
© 2016
Graphical Displays of Data
• Types of graphical comparisons
– Group summary
– Trends or changes over time
– Relative size of groups
– Relationships between variables
© 2016
Bar Graph or Chart
• Group summary
• Comparison of counts or averages across
groups
• Two variables: admissions, age category.
– One bar for each gender
© 2016
Line Graphs or Chart
• Trends or changes over time
• Look for trends/patterns
• Should not be used for connecting unrelated points
© 2016
Pie Chart
• Compares relative size of groups
• Used to represent relative proportions of a total
• Note that this is different than a bar chart – in a pie
chart categories must be part of a bigger set or
population
© 2016
Scatter Diagrams
• Used to display the relationship between two
continuous variables
• Should not be used if either variable is categorical
© 2016
Infographics
• Conveys a message or story using a
combination of graphs and text
• Primary types:
– Cause and effect
– Chronological
– Quantitative
– Directional
– Product
© 2016
Tables versus Graphs
• Tables have several advantages over graphs such
as:
– Present more information than a graph
– Display the exact values
– Require less work to create
• Graphs also have advantages over tables such as:
– Catch the attention of the reader
– Show trends easily
– Bring out facts or relationships that stimulate thinking

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Hm306 week 2

  • 1. © 2016© 2016 A Practical Approach to Analyzing Healthcare Data Chapter 3 – Tools for Data Organization, Analysis, and Presentation
  • 2. © 2016 Data Organization Using Databases • Healthcare data is complex and often multi- dimensional – Provider – Patients – Insurance companies – Services • Providing an organizational structure for the data can facilitate more efficient analysis and reporting • Database – self-describing collection of integrated records. – Self-describing – contains a description of its own structure – Integrated – data elements are related to each other
  • 3. © 2016 Database Vocabulary • Tables- two dimensional arrays of data – Rows = records – Columns = variables or attributes • RDMS – Relational Database Management System – Software that is used to hold and maintain data tables and their relationships • SQL – Structured Query Language – Programming language used to communicate with a relational database • ERD – Entity Relationship Diagram – Diagram that shows how tables in an RDMS relate
  • 4. © 2016 Small-Scale Databases • Microsoft Access – Relational database management system (RDMS) – Strengths • Approachable for inexperienced database users • Graphical user interface (GUI) • Built in wizards for table, query and report design • Supports integrated forms for data collection – Weaknesses • Multi-user support is difficult to implement • Database size limited to 2GB • Most ‘classic’ Database Administrators (DBAs) do not consider Access to be a full blown RDMS
  • 5. © 2016 Hierarchy of a Relational Database • Tables are rows and columns of values – Envision a tab in a spreadsheet • Fields are the columns in a spreadsheet – In a patient database, fields may be age, gender, admission date, etc. • Data elements or records are the rows in a spreadsheet – In a patient database, row may represent patients or services provided to patients • A unique row identifier in a table is called the primary key – Cannot be duplicated within the same table – Used to link tables together
  • 6. © 2016 Entity Relationship Diagram • Diagram that displays the relationships between tables within a RDBMS • The key fields are identified as well as the cardinality of the relationship between the tables • Cardinality – One – to – one – One – to – many • In Figure A.1 – PatientID is the primary key in the Patient Info table and a secondary key in the Visits table – The cardinality of the relationship between the table is one to many. • Each patient may have many visits
  • 7. © 2016 More About Cardinality
  • 8. © 2016 Data Dictionary • Details roadmap of the database • Should include – Name of computer or software program that contains the data element – Type of data in the field – Length of data in the field – Edits placed on the data field – Values allowed to be placed in the data field – A clear definition of each value
  • 9. © 2016 Structured Query Language • SQL • Tool to use and maintain databases – Select data – Update data – Insert rows into a table – Delete rows from a table
  • 10. © 2016 SQL Example • Retrieve the records for all patients from Milwaukee – SELECT PATIENT_LNAME, PATIENT_FNAME FROM PATIENT WHERE PATIENT_CITY = ‘Milwaukee’ • Key words in the query are in red font
  • 11. © 2016 Statistical Software Packages • Statistical Package for the Social Sciences (SPSS) – Menu driven program – More suited for smaller (<1G) datasets – May open Excel files for analysis • Statistical Analysis System (SAS) – Command line program – Excellent for manipulating large datasets
  • 12. © 2016 SAS Syntax • SAS is a programming language much like SQL – Key words: • Data – used to name and create a dataset • Proc – declare which analytic procedure will be used • Set – declare which dataset will be the subject of the analysis • Run – designates the end of the command and starts the calculation – Syntax: always end commands with a ‘;’
  • 13. © 2016 Role of Excel – Data Analysis • Data analysis – Data analysis toolpak add-in – Must be careful importing text data elements that appear to be numeric • ICD-9 codes with leading zeroes • Variables with mixed number and alpha values • Pivot tables are also an excellent exploratory data analysis tool
  • 14. © 2016 Graphical Displays of Data • Types of graphical comparisons – Group summary – Trends or changes over time – Relative size of groups – Relationships between variables
  • 15. © 2016 Bar Graph or Chart • Group summary • Comparison of counts or averages across groups • Two variables: admissions, age category. – One bar for each gender
  • 16. © 2016 Line Graphs or Chart • Trends or changes over time • Look for trends/patterns • Should not be used for connecting unrelated points
  • 17. © 2016 Pie Chart • Compares relative size of groups • Used to represent relative proportions of a total • Note that this is different than a bar chart – in a pie chart categories must be part of a bigger set or population
  • 18. © 2016 Scatter Diagrams • Used to display the relationship between two continuous variables • Should not be used if either variable is categorical
  • 19. © 2016 Infographics • Conveys a message or story using a combination of graphs and text • Primary types: – Cause and effect – Chronological – Quantitative – Directional – Product
  • 20. © 2016 Tables versus Graphs • Tables have several advantages over graphs such as: – Present more information than a graph – Display the exact values – Require less work to create • Graphs also have advantages over tables such as: – Catch the attention of the reader – Show trends easily – Bring out facts or relationships that stimulate thinking