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1
Mass spectrometry:
 A technique for measuring and analyzing
molecules,that involves introducing enough energy
into a target molecule to cause its ionizationand
disintegration.The resulting primary ions and their
fragments are then analyzed, based on their mass/
charge ratios, to produce a “molecular fingerprint.”
2
Electron impact Ionization (EI) :
 In the EI process,the sample is vaporizedinto the
mass spectrometer Ion source,where it is impacted
by the a beam of electrons with Sufficientenergy to
ionize the molecule.
 Used for volatile and thermally stable compounds.
e.g. M (g) + e- M+(g) + 2 e-
3
 This method is suitable for volatile organic
compounds
e.g. = hydrocarbon, oils, flavors’,
 Probability of breaking Bond is maximum at 70eV
but less than 70eV energy electionpass through
the molecule without breaking bond .
 Disadvantage ; produce abdunt fragmention.
4
Chemical ionization (CI) :
 Chemical ionizationinvolves ion-moleculereactions
to produce ions fromthe analyte.
 A high reagent gas pressure (60 Pa), results in ion-
molecule reactions between the reagent gas ions
and reagent gas neutrals
 The products of these ion-molecule reactions can
react with the analyte molecules to produce
analyte ions
5
Field ionization (FI) :
 The sample is evaporated froma direct insertion
probe, gas , or gas inlet. As the gas molecules pass
near the Emitter, they are ionizedby electron
tunnelling.( Quantum tunnelling)
 The sample must be thermally volatile.
 If compound is non-volatile or thermolabile soln
Prepared in Volatile solvent applied to fieldion
emitter the sample then Subjected to high electric
field this modificationis called field Desorption.
 Field desorption(FD) is a method of ion formation
used in mass spectrometry (MS) in which a high-
potential electricfield is applied to an emitter with
a sharp surface, such as a razor blade, or more
commonly,a filamentfromwhich tiny "whiskers"
have formed.
 This results in a high electricfieldwhich can result
in ionizationof gaseous molecules of the analyte.
6
Fast atom bombardment ionization(FAB):
 The sample is deposited on a target that is
bombarded with atoms, Neutrals, or ions.
 Dissolve the analyte in a liquid matrix with low
volatility and to use a Relatively high current of
bombarding particles (4000 to 10,000 eV)
 m-nitrobenzylicalcohol (MNBA) is a good liquid
matrix for non-polar compounds
 It is useful for non-volatile,polar and thermally
unstable compounds And also high molecular
weight compounds like insulin, vitamins.
7
Matrix assisted laser desorption ionization
(MALDI) :
 The analyte is dissolvedin a solution containing an
excess of a matrix such as sinapinic acid or
dihydroxybenzoicacid that has a chromophore that
absorbs at the laser wavelengthA small amount of
this solutionis placed on the laser target
 The matrix absorbs the energy fromthe laser pulse
and produces a plasma that results in vaporization
and ionizationof the analyte.
 It is used as non-volatile,polar and thermally
unstable compounds. Good for large molecules
(proteins, polymers,carbohydrates)
8
9
Atmospheric Pressure Chemical Ionization
(APCI):
• gas phase chemical ionization(CI) process where the
vapourizedLC Mobile phase acts as the CI reagent gas
to ionize the sample
• Mobile phase and analyte are first nebulized (N2) and
vapourisedby Heating to 350-550⁰C
• The resulting vapour is ionizedusing a corona
discharge (source of Electrons)
• Subsequent ion/molecule reactions (CI) then cause
ionizationof the Analyte
• Unlike ESI, analyte ions do not need to exist in
solution
• Unlike ESI, best sensitivity is achieved at high liquid
flowrates i.e. 200μL–1mL/min therefore easily
interfaced to conventional HPLC
 Samples containing heteroatoms:urea’s,
benzodiazepines,Carbamates
10
11
12
Electrospray ionization (ESI):
 The sample solutionis sprayed across a high potential
difference (3_4 KV) froma needle into an orifice in
the interface.Heat and gas flows are used to
desolvate the ions existing in the sample solution.
 Production of charged droplets at the electrospray
capillary tip;
 an evolutionof the charged Droplets by repeated
droplet disintegrationand formationof very small
highly charged droplets Capable of producing gas-
phase ions.
13
Atmospheric pressure photoionization(APPI):
• Experimentally,you can viewAPPI as an APCI source
where the coronadischarge has been replaced with a uv
lamp
• The 1st step is complete vapourizationof the mobile
phase used in the LC separation employing nebulization
(N2) and heating to 350-550⁰C
• gas phase photoionizationprocess
• where the vapourizedmobile phase may be
photoionizedto form a CI plasma
• or a modifier (dopant = e.g. toluene and acetone. ) is
added to aid the photoionization
process and formationof the CI plasma
• or the analyte can be directly photoionizedby
photons from the uv lamp
14
15
16

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Ionazation in Mass spectroscopy

  • 1. 1 Mass spectrometry:  A technique for measuring and analyzing molecules,that involves introducing enough energy into a target molecule to cause its ionizationand disintegration.The resulting primary ions and their fragments are then analyzed, based on their mass/ charge ratios, to produce a “molecular fingerprint.”
  • 2. 2 Electron impact Ionization (EI) :  In the EI process,the sample is vaporizedinto the mass spectrometer Ion source,where it is impacted by the a beam of electrons with Sufficientenergy to ionize the molecule.  Used for volatile and thermally stable compounds. e.g. M (g) + e- M+(g) + 2 e-
  • 3. 3  This method is suitable for volatile organic compounds e.g. = hydrocarbon, oils, flavors’,  Probability of breaking Bond is maximum at 70eV but less than 70eV energy electionpass through the molecule without breaking bond .  Disadvantage ; produce abdunt fragmention.
  • 4. 4 Chemical ionization (CI) :  Chemical ionizationinvolves ion-moleculereactions to produce ions fromthe analyte.  A high reagent gas pressure (60 Pa), results in ion- molecule reactions between the reagent gas ions and reagent gas neutrals  The products of these ion-molecule reactions can react with the analyte molecules to produce analyte ions
  • 5. 5 Field ionization (FI) :  The sample is evaporated froma direct insertion probe, gas , or gas inlet. As the gas molecules pass near the Emitter, they are ionizedby electron tunnelling.( Quantum tunnelling)  The sample must be thermally volatile.  If compound is non-volatile or thermolabile soln Prepared in Volatile solvent applied to fieldion emitter the sample then Subjected to high electric field this modificationis called field Desorption.  Field desorption(FD) is a method of ion formation used in mass spectrometry (MS) in which a high- potential electricfield is applied to an emitter with a sharp surface, such as a razor blade, or more commonly,a filamentfromwhich tiny "whiskers" have formed.  This results in a high electricfieldwhich can result in ionizationof gaseous molecules of the analyte.
  • 6. 6 Fast atom bombardment ionization(FAB):  The sample is deposited on a target that is bombarded with atoms, Neutrals, or ions.  Dissolve the analyte in a liquid matrix with low volatility and to use a Relatively high current of bombarding particles (4000 to 10,000 eV)  m-nitrobenzylicalcohol (MNBA) is a good liquid matrix for non-polar compounds  It is useful for non-volatile,polar and thermally unstable compounds And also high molecular weight compounds like insulin, vitamins.
  • 7. 7 Matrix assisted laser desorption ionization (MALDI) :  The analyte is dissolvedin a solution containing an excess of a matrix such as sinapinic acid or dihydroxybenzoicacid that has a chromophore that absorbs at the laser wavelengthA small amount of this solutionis placed on the laser target  The matrix absorbs the energy fromthe laser pulse and produces a plasma that results in vaporization and ionizationof the analyte.  It is used as non-volatile,polar and thermally unstable compounds. Good for large molecules (proteins, polymers,carbohydrates)
  • 8. 8
  • 9. 9 Atmospheric Pressure Chemical Ionization (APCI): • gas phase chemical ionization(CI) process where the vapourizedLC Mobile phase acts as the CI reagent gas to ionize the sample • Mobile phase and analyte are first nebulized (N2) and vapourisedby Heating to 350-550⁰C • The resulting vapour is ionizedusing a corona discharge (source of Electrons) • Subsequent ion/molecule reactions (CI) then cause ionizationof the Analyte • Unlike ESI, analyte ions do not need to exist in solution • Unlike ESI, best sensitivity is achieved at high liquid flowrates i.e. 200μL–1mL/min therefore easily interfaced to conventional HPLC  Samples containing heteroatoms:urea’s, benzodiazepines,Carbamates
  • 10. 10
  • 11. 11
  • 12. 12 Electrospray ionization (ESI):  The sample solutionis sprayed across a high potential difference (3_4 KV) froma needle into an orifice in the interface.Heat and gas flows are used to desolvate the ions existing in the sample solution.  Production of charged droplets at the electrospray capillary tip;  an evolutionof the charged Droplets by repeated droplet disintegrationand formationof very small highly charged droplets Capable of producing gas- phase ions.
  • 13. 13 Atmospheric pressure photoionization(APPI): • Experimentally,you can viewAPPI as an APCI source where the coronadischarge has been replaced with a uv lamp • The 1st step is complete vapourizationof the mobile phase used in the LC separation employing nebulization (N2) and heating to 350-550⁰C • gas phase photoionizationprocess • where the vapourizedmobile phase may be photoionizedto form a CI plasma • or a modifier (dopant = e.g. toluene and acetone. ) is added to aid the photoionization process and formationof the CI plasma • or the analyte can be directly photoionizedby photons from the uv lamp
  • 14. 14
  • 15. 15
  • 16. 16