Module for Grade 9 for Asynchronous/Distance learning
Quenching In Fluorimetry.
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AUTONOMOUS
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SIRO- DSIR
Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 1
Presented by
Ms. K. Sandhya Rani
(Reg.No:20L81S0702)
Under the guidance of
Dr. P.Ramalingam M.Pharm, Ph.D.,
Director – R&D Division
& Professor of Pharmaceutical and Medicinal Chemistry,
President – IPA Local Branch – Anantapuramu.
Quenching in Fluorimetry
A Seminar as a part of curricular requirement for 1st year
M. Pharm 1st semester
2. RIPER
AUTONOMOUS
NAAC &
NBA (UG)
SIRO- DSIR
Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 2
Introduction
Quenching
Types of Quenching
Applications
Conclusion
References
Contents:
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AUTONOMOUS
NAAC &
NBA (UG)
SIRO- DSIR
Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 3
Fluorescence:
When a molecule absorbs light in the visible or ultraviolet range of
the spectrum, it is excited from the electronic ground state to an
excited state.
It return to the ground state by releasing the absorbed energy in the
form of heat.
The emitted light is called Fluorescence.
Introduction:
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NAAC &
NBA (UG)
SIRO- DSIR
Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 4
5. RIPER
AUTONOMOUS
NAAC &
NBA (UG)
SIRO- DSIR
Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 5
Quenching refers to any process that decreases the fluorescence
intensity of a given substance.
Eg:- pH, concentration, temperature, viscosity, presence of oxygen,
heavy metals or specific chemical substances etc.
Quenching takes place due to presence of an anion or ions with
loosely bound electrons.
During Quenching there is no permanent reaction between the
fluorescent substance and the quenchers.
Quenching:
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Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 6
Quenchers are substances capable of absorbing energy from a
fluorophore (such as a fluorescent dye) and re-emitting much of that
energy as either heat (in the case of dark quenchers) or visible light
(in the case of fluorescent quenchers).
Eg: Molecular oxygen, Thiocyanate, Halogens, Disulfide,
Nitric oxide.
Quenchers:
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 7
Fluorophores are fluoroscent chemical compounds that can re-emit
light upon excitation.
It absorbs light energy of specific wavelength and re-emits at longer
wavelength.
Fluorophores:
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 8
1. Concentration Quenching
2. Chemical Quenching
3. Static Quenching
4. Collisional Quenching
Types of Quenching:
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Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 9
Concentration Quenching may be caused by excessive absorption of
either primary or fluorescent radiation by the solution.
This is also called as Inner Filter effect.
It is a kind of Self Quenching.
It can be calculated by following equation:
F=QI0act
1.Concentration Quenching:
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 10
In the above equation,
Q = Fluorescence efficiency (Constant for a particular substance)
I0 = Incident light (Constant for a instrument)
a = Molecular extinction coefficient, which is constant for a substance
t = Path length
c = Concentration of the substance
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Deviations at higher concentrations can be
attributed to self-quenching.
Concentration of the Solution
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Chemical quenching is due to various factors like changes in pH,
Presence of oxygen, halides and electron withdrawing groups, heavy
metals etc.,
PH: Aniline at pH 5 to 13 gives blue fluorescence when excited at
290nm.
But at pH <5 and >13 it does not exhibit fluorescence.
Oxygen: Presence of oxygen leads to quenching because of its
paramagnetic property.
2. Chemical Quenching:
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 13
Halides and electron withdrawing groups: Halides like chlorine,
bromine, iodide and electron withdrawing groups like nitro and
carboxylic group leads to quenching.
3. Static Quenching:
It occurs at the ground state of Fluorescing molecule.
Also called Contact quenching
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 14
It involves the formation of chemical complex between the
fluorophore and quencher.
Ex: Caffeine and related xanthines and purines reduce intensity
of riboflavin by static mechanism.
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 15
It occurs by the interaction of a quencher molecule with an
excited molecule of the fluorescing substance.
Also called Dynamic quenching.
Ex: Halides such as chloride or, iodides are well know collisional
quenchers.
4. Collisional Quenching:
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Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 16
Determine Membrane permeability to the quenchers.
Determination of diffusion constant.
Investigation of conformational states of proteins.
Used as a indicator of DNA hybridization.
Applications:
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K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 17
Quenching is an undesirable effect an the possibility of encountering
this type of interference should be evaluated in developing a
fluorometric assay.
However, this phenomenon can be used as an analytical means for
determining the concentration of the compounds known to quench
fluorescence.
Conclusion:
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Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 18
1. Douglas A Skoog, Donald M west, F James holler, Stanley R
crouch, Molecular fluorescence spectroscopy, Text book of
Fundamentals of analytical chemistry;8: 826-838.
2. J. R. Lakowicz, Principles of Fluorescence Spectroscopy, 3rd ed.,
Springer, New York;2006: 954.
3. Kautsky H, Quenching of luminescence by oxygen. Trans Faraday
Soc;35: 216–219.
4. Kommu Naresh, Applications of Fluorescence spectroscopy,
journal of chemical and Pharmaceutical sciences;2004: 18-21.
References:
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SIRO- DSIR
Raghavendra Institute of Pharmaceutical Education and Research - Autonomous
K.R.Palli Cross, Chiyyedu, Anantapuramu, A. P- 515721 19