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Andrea Ajero
Solomon Ihejinka
Mayur Patel
Diana Asumang
Nebiha Ibrahim
Renee Backen
DEFINITION OF FLOW CYTOMETRY?
 Flow - motion Cyto - cell Metry - measure
FACS (Flourescence Activated Cell Sorting)
 PURPOSE S OF FLOW CYTOMETRY
 Immunophenotyping
 DNA and Blood Analysis
 Data Analysis
 Diagnosis (Health Disorder)
THE PRINCIPLES OF FLOW CYTOMETRY
THE APPLICATIONS OF THE METHODOLOGY IN THE CLINICAL
LABORATORY
 Clinical
 Research
PRINCIPLE
 -Light source
 -Lasers
 Light scattering/Reflection
 -FSC (Forward scatter)
 -SSC (Side scatter)
 -Light excitation
 -Wavelength
 -Fluorophores emission
 -Recognition of cell
 -Histogram
 -One parameter
 -Two parameter
PRINCIPLE
• The three main subsystems-:
- Fluidics – It transport particles to the laser beam for interrogation.
- Optics – Excitation and Collection Components.
- Electronics – It convert detect lights into signals and send information to
computer. The data is stored and graphs are plotted to further analysis it.
The process of gating is very important
in the analysis of flow cytometry data
Gating refers to the process of selecting
a subset of the collected events for
further analysis
Subsets can continue to be gated to
generate further subsets
The process of gating simply creates a
new population
Naming subpopulations in gating is important
 Siblings with the same names are not allowed,
otherwise there would be confusion
It is recommended that using duplicate names of
subpopulations within any given sample be avoided
Gating
WHERE CAN FLOW CYTOMETRY APPLICATION BE
FOUND?
Flow Cytometry Facilities
 Mayo Clinic
 Stanford School of Medicine
 Unc. Sick Kids Research Clinic
in Canada
 Veterinary Services
 George Washington University
Medical Center
 The University of Chicago
 John Hopkins Medical
Research
Mayo Clinic Locations:
 Minnesota , Arizona,
Wisconsin,
 Georgia, Arizona, Florida,
Massachusetts
 Amyloidosis
Flow cytometric immunophenotyping showed
an abnormal B-cell population expressing
CD19, CD20, dim monotypic lambda light
chains, CD23, CD5, consistent with CLL.
Flow Cytometer’s
Application in Clinical
And Research
Monitoring HIV—Identification and
Enumeration
of Lymphocyte Subsets
The BD Multitest™ 6-color TBNK kit is the first
and only 6-color In Vitro Diagnostic application
to provide a complete immune panel in a single
tube, saving valuable time and resources for
sample processing
References
BD Bioscience (2011) BD FACSCantoTM Brochure. Retrieved from
http://www.bdbiosciences.com/documents/BD_FACSCanto_II_brochure.pdf
Brown, M., & Wittwer, C. (2000, August). Flow Cytometry:
Principles and Clinical Applications in Hematology.
Retrieved September 15, 2013 from
http://www.clinchem.org/content/46/8/1221.full
Clinical Flow Wiki. (n.d.) Introduction to Flow Cytometric Analysis Retrieved from
http://www.clinicalflow.com/Cases/Introduction_to_Flow_Cytometric_Analy
sis
Evans, F. (2012). Fiber delivery systems enhance flow cytometry designs. Laser
Focus World, 48(11), 53. Retrieved from
http://web.ebscohost.com/ehost/pdfviewer/pdfviewer?sid=378fd7c5-f697-
49d2-88cf-e51f160b7b9b%40sessionmgr4&vid=4&hid=9
References
FlowJo - v7.6.5 Manual - Gating."FlowJo Home”. N.p. (n.d.) Retrieved from
http://www.flowjo.com/v765/en/gating.htm
Fromm, J., Thomas, B., Wood, B. (2009) Flow Cytometry Can Diagnose Classical
Hodgkin Lymphoma in Lymph Nodes with High Sensitivity and Specificity
American Journal of Clinical Pathology. Retrieved from
http://www.medscape.com/viewarticle/453271
Introduction to Flow Cytometry: A Learning Guide, (n.d.) “Stem Cell Institute Medical
School. Version 11-11032-01. University of Minnesota. Retrieved from
http://www.stemcell.umn.edu/prod/groups/med/@pub/@med/documents/as
set/med_80691.pdf
Kincaid, K. Semiconductor lasers shed new light on flow cytometry (2004). Laser
Focus World. Retrieved from
http://web.ebscohost.com/ehost/pdfviewer/pdfviewer?sid=378fd7c5-f697-
49d2-88cf-e51f160b7b9b%40sessionmgr4&vid=4&hid=9
References
Lookfordiagnosis (n.d.) Flow Cytometry. Retrieved from
http://www.lookfordiagnosis.com/mesh_info.php?term=Flow+Cytometry
&lang=1
Mayo Foundation for Medical Education and Research. (1995-2013) Flow
Cytometry Immunonphenotyping. Retrieved from
http://www.mayomedicallaboratories.com/articles/hottopics/transcripts/
2009/2009-12a-amyloidosis/12a-17.html
Overview-BD (n.d.) Medical Supplies, Devices and Technology. Retrieved from
http://www.bd.com/videos/bdb/training/itf/overview/player.html
Science Art. (2008). Retrieved September 15, 2013, from
http://vesuvias.wordpress.com/page/2/
Shen, H., Tang, Y. (2012) Rapid Detection of Neoplastic Cells in Serous Cavity
Effusions in Children with Flow Cytometry Immunophenotyping. Retrieved
from http://www.ncbi.nlm.nih.gov/pubmed/22288605
References
Science Art. (2008). Retrieved September 15, 2013, from
http://vesuvias.wordpress.com/page/2/
Shen, H., Tang, Y. (2012) Rapid Detection of Neoplastic Cells in Serous
Cavity Effusions in Children with Flow Cytometry Immunophenotyping.
Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/22288605

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Updated 2016 introduction to the methodology of flow cytometry

  • 1. Andrea Ajero Solomon Ihejinka Mayur Patel Diana Asumang Nebiha Ibrahim Renee Backen
  • 2. DEFINITION OF FLOW CYTOMETRY?  Flow - motion Cyto - cell Metry - measure FACS (Flourescence Activated Cell Sorting)  PURPOSE S OF FLOW CYTOMETRY  Immunophenotyping  DNA and Blood Analysis  Data Analysis  Diagnosis (Health Disorder) THE PRINCIPLES OF FLOW CYTOMETRY THE APPLICATIONS OF THE METHODOLOGY IN THE CLINICAL LABORATORY  Clinical  Research
  • 3. PRINCIPLE  -Light source  -Lasers  Light scattering/Reflection  -FSC (Forward scatter)  -SSC (Side scatter)  -Light excitation  -Wavelength  -Fluorophores emission  -Recognition of cell  -Histogram  -One parameter  -Two parameter
  • 4. PRINCIPLE • The three main subsystems-: - Fluidics – It transport particles to the laser beam for interrogation. - Optics – Excitation and Collection Components. - Electronics – It convert detect lights into signals and send information to computer. The data is stored and graphs are plotted to further analysis it.
  • 5. The process of gating is very important in the analysis of flow cytometry data Gating refers to the process of selecting a subset of the collected events for further analysis Subsets can continue to be gated to generate further subsets The process of gating simply creates a new population Naming subpopulations in gating is important  Siblings with the same names are not allowed, otherwise there would be confusion It is recommended that using duplicate names of subpopulations within any given sample be avoided Gating
  • 6. WHERE CAN FLOW CYTOMETRY APPLICATION BE FOUND? Flow Cytometry Facilities  Mayo Clinic  Stanford School of Medicine  Unc. Sick Kids Research Clinic in Canada  Veterinary Services  George Washington University Medical Center  The University of Chicago  John Hopkins Medical Research Mayo Clinic Locations:  Minnesota , Arizona, Wisconsin,  Georgia, Arizona, Florida, Massachusetts  Amyloidosis Flow cytometric immunophenotyping showed an abnormal B-cell population expressing CD19, CD20, dim monotypic lambda light chains, CD23, CD5, consistent with CLL.
  • 7. Flow Cytometer’s Application in Clinical And Research Monitoring HIV—Identification and Enumeration of Lymphocyte Subsets The BD Multitest™ 6-color TBNK kit is the first and only 6-color In Vitro Diagnostic application to provide a complete immune panel in a single tube, saving valuable time and resources for sample processing
  • 8. References BD Bioscience (2011) BD FACSCantoTM Brochure. Retrieved from http://www.bdbiosciences.com/documents/BD_FACSCanto_II_brochure.pdf Brown, M., & Wittwer, C. (2000, August). Flow Cytometry: Principles and Clinical Applications in Hematology. Retrieved September 15, 2013 from http://www.clinchem.org/content/46/8/1221.full Clinical Flow Wiki. (n.d.) Introduction to Flow Cytometric Analysis Retrieved from http://www.clinicalflow.com/Cases/Introduction_to_Flow_Cytometric_Analy sis Evans, F. (2012). Fiber delivery systems enhance flow cytometry designs. Laser Focus World, 48(11), 53. Retrieved from http://web.ebscohost.com/ehost/pdfviewer/pdfviewer?sid=378fd7c5-f697- 49d2-88cf-e51f160b7b9b%40sessionmgr4&vid=4&hid=9
  • 9. References FlowJo - v7.6.5 Manual - Gating."FlowJo Home”. N.p. (n.d.) Retrieved from http://www.flowjo.com/v765/en/gating.htm Fromm, J., Thomas, B., Wood, B. (2009) Flow Cytometry Can Diagnose Classical Hodgkin Lymphoma in Lymph Nodes with High Sensitivity and Specificity American Journal of Clinical Pathology. Retrieved from http://www.medscape.com/viewarticle/453271 Introduction to Flow Cytometry: A Learning Guide, (n.d.) “Stem Cell Institute Medical School. Version 11-11032-01. University of Minnesota. Retrieved from http://www.stemcell.umn.edu/prod/groups/med/@pub/@med/documents/as set/med_80691.pdf Kincaid, K. Semiconductor lasers shed new light on flow cytometry (2004). Laser Focus World. Retrieved from http://web.ebscohost.com/ehost/pdfviewer/pdfviewer?sid=378fd7c5-f697- 49d2-88cf-e51f160b7b9b%40sessionmgr4&vid=4&hid=9
  • 10. References Lookfordiagnosis (n.d.) Flow Cytometry. Retrieved from http://www.lookfordiagnosis.com/mesh_info.php?term=Flow+Cytometry &lang=1 Mayo Foundation for Medical Education and Research. (1995-2013) Flow Cytometry Immunonphenotyping. Retrieved from http://www.mayomedicallaboratories.com/articles/hottopics/transcripts/ 2009/2009-12a-amyloidosis/12a-17.html Overview-BD (n.d.) Medical Supplies, Devices and Technology. Retrieved from http://www.bd.com/videos/bdb/training/itf/overview/player.html Science Art. (2008). Retrieved September 15, 2013, from http://vesuvias.wordpress.com/page/2/ Shen, H., Tang, Y. (2012) Rapid Detection of Neoplastic Cells in Serous Cavity Effusions in Children with Flow Cytometry Immunophenotyping. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/22288605
  • 11. References Science Art. (2008). Retrieved September 15, 2013, from http://vesuvias.wordpress.com/page/2/ Shen, H., Tang, Y. (2012) Rapid Detection of Neoplastic Cells in Serous Cavity Effusions in Children with Flow Cytometry Immunophenotyping. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/22288605

Editor's Notes

  1. Evans, F. (2012). Fiber delivery systems enhance flow cytometry designs. Laser Focus World, 48(11), 53. Retrieved September 17, 2013 from http://web.ebscohost.com/ehost/pdfviewer/pdfviewer?sid=378fd7c5-f697-49d2-88cf-e51f160b7b9b%40sessionmgr4&vid=4&hid=9   Fromm, J., Thomas, B., Wood, B. (2009). Flow Cytometry Can Diagnose Classical Hodgkin Lymphoma in Lymph Nodes with High Sensitivity and Specificity. American Journal of Clinical Pathology. Retrieved Septemebr 17, 2013 from http://www.medscape.com/viewarticle/453271 Kincaid, K. (2004). Semiconductor lasers shed new light on flow cytometry. Laser Focus World. Laser Focus World. Retrieved September 17, 2013 from http://web.ebscohost.com/ehost/pdfviewer/pdfviewer?sid=378fd7c5-f697-49d2-88cf-e51f160b7b9b%40sessionmgr4&vid=4&hid=9  
  2. 1. Brown, M., & Wittwer, C. (2000, August). Flow Cytometry: Principles and Clinical Applications in Hematology. Retrieved September 15, 2013 from http://www.clinchem.org/content/46/8/1221.full 2. Science Art. (2008). Retrieved September 15, 2013, from http://vesuvias.wordpress.com/page/2/
  3. Overview-BD (nd)Medical Supplies, Devices and Technology. Retrieved on September 15, 2013 from http://www.bd.com/videos/bdb/training/itf/overview/player.html 2. Lookfordiagnosis (n.d.) Flow Cytometry. Retrieved from http://www.lookfordiagnosis.com/mesh_info.php?term=Flow+Cytometry&lang=1 2. Lookfordiagnosis (nd) Flow Cytometry. Retrieved on September 15, 2013, from http://www.lookfordiagnosis.com/mesh_info.php?term=Flow+Cytometry&lang=1  
  4. FlowJo - v7.6.5 Manual - Gating."FlowJo Home”. N.p. (n.d.) Retrieved from http://www.flowjo.com/v765/en/gating.htm Clinical Flow Wiki. (n.d.) Introduction to Flow Cytometric Analysis Retrieved from http://www.clinicalflow.com/Cases/Introduction_to_Flow_Cytometric_Analysis 2. Introduction to Flow Cytometry: A Learning Guide ." Stem Cell Institute Medical School. Version 11-11032-01. University of Minnesota , n.d. Web. 17 Sept. 2013. http://www.stemcell.umn.edu/prod/groups/med/@pub/@med/documents/asset/med_80691.pdf 3. Introduction to Flow Cytometric Analysis - Clinical Flow Wiki." Clinical Flow Wiki - Clinical Flow Wiki. N.p., n.d. Web. 17 Sept. 2013. http://www.clinicalflow.com/Cases/Introduction_to_Flow_Cytometric_Analysis
  5. Mayo Foundation for Medical Education and Research. (1995-2013) Flow Cytometry Immunonphenotyping. Retrieved on September 16, 2013 from http://www.mayomedicallaboratories.com/articles/hottopics/transcripts/2009/2009-12a-amyloidosis/12a-17.html
  6. BD Bioscience (2011) BD FACSCantoTM Brochure. Retrieved on September 15, 2013 from http://www.bdbiosciences.com/documents/BD_FACSCanto_II_brochure.pdf