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The Chemistry of the Cell
(Macromolecules)
Organic Molecules
• Organic molecules are those that have carbon atoms.
• In living systems, large organic molecules, called
macromolecules, may consist of hundreds or
thousands of atoms.
• Most macromolecules are polymers, molecules that
consist of a single unit (monomer) repeated many
times.
Carbon compound formation
Complex molecules can be formed by connecting carbon atoms
together in a straight line or by connecting carbons together to form
rings.
• The presence of nitrogen, oxygen, and other atoms adds additional
variety to these carbon molecules.
Functional groups
*Many organic
molecules share similar
properties because
they have similar
clusters of atoms,
called functional
groups.
• Each functional group
gives the molecule a
particular property,
such as acidity or
polarity.
Carbon based Molecules
What are Macromolecules?
 Cells and their organelles are made up of smaller
building blocks called macromolecules.
 There are 4 basic types of macromolecules.
They are:
 Lipids
 Proteins
 Carbohydrates
 Nucleic Acids
Monomers & Polymers
 Macromolecules are actually made up of even smaller
subunits. Each subunit of a macromolecule is called a
monomer.
 The macromolecules themselves are called polymers,
because they are made up of many of these subunits.
Monomer: one basic unit or subunit
Polymer: a chain of many basic units
What you need to know:
 Names of the 4 macromolecules
 Structure- monomers and polymers of each
 Function- what are they used for?
Lipids
Lipids
• Lipids are organic molecules essential
for life that are composed mostly of C,
H, O
• 4 types of lipids
– fats (triglycerides)
– phospholipids
– steroids
– waxes
Structure of Lipids
 Lipids are made up of monomers called fatty acids
 fatty acids have two essential features:
1. A long hydrocarbon chain
• The chain length ranges from 4 to 30 carbons
2. A carboxylic acid group
Properties of Lipids
resulted from:
1. Saturation of fatty
acids with Hydrogen:
Saturated f.a’s VS. Unsaturated f.a’s
2. Polarity:
 Some lipids consists of Polar head
(Hydrophilic) and nonpolar tail
regions (hydrophobic)
Triglycerides
– Fat molecules
• Structure = 3 fatty acids chains linked to
glycerol
• Functions = long term energy storage
• Can be saturated or unsaturated
Glycerol
3 fatty
acids
ester bond
Saturated fats
• All C bonded to H
• No C=C double bonds
– long, straight chain
– most animal fats and butter
– solid at room temperature
Unsaturated fats
• At least one C=C double
bond in the fatty acids
– plant & fish fats
– vegetable oils
– liquid at room temperature
• Structure: 2 fatty acids (tails) + phosphate
group (head)
• Fatty acid chains = non-polar = hydrophobic “water
fearing”
• Phosphate head = polar = hydrophillic “water loving”
•Function: make up cell
membranes (phospholipid bilayer)
Phospholipids
Steroids
• Structure: 4 fused Carbon rings
• examples:
– cholesterol – Function =control the fluidity of the cell
membrane
– hormones – Function = regulate many processes in the
body
– vitamins (A, B, D) – Function = supports metabolism and
cell processes
AP Biology
• Solid at room temp
• Insoluble in water
• Function:
– Protective
covering for
animals and plants
• Examples:
– Beeswax
– Cuticle of leaf (keeps
water in)
Wax
Functions of Lipids
 Make up the cell membrane, providing cell structure
 Provide insulation (fat keeps body warm)
 Long-term energy storage
Proteins
Structure of Proteins
 Proteins are made up of monomers
(basic unit) called amino acids
 There are 20 different a.a’s
 Proteins are also called
polypeptides
dipeptide
Amino acids
linked by
peptide
bonds
20 Amino Acids:
Some of these are polar & hydrophilic, others are non-polar and
hydrophobic. Proteins can contain both kinds.
 Proteins have complex
structures. The shape of a
protein determines its function!
 The levels of protein structure
are:
 Primary structure: polypeptide
chain
 Secondary structure:
polypeptides in coils or sheets
 Tertiary structure: coils or
sheets form a tangle
 Quaternary structure: more
than one tangle combine to
make a very complex protein
Functions of Proteins
 Enzymes- proteins that speed up chemical reactions
 Component of Cell membrane
 Build and repair of muscles and
tissues
Ex. Actin, Myosin, Collagen….
Food Sources of Proteins
 Proteins are found in meat, fish, legumes, nuts, milk,
eggs, grains and soy products.
 There are 6 amino acids that our bodies cannot make-
we can only get these from food.
What are they called???
Research Question
 Which elements are found in protein????
Proteins: Indicator Test
 Biuret’s Test:
 Turns from blue to purple if protein is present
Carbohydrates
Structure of Carbohydrates
 Carbohydrates are made up of monomers called
monosaccharides.
 Ex.: Glucose, Fructose, ….
 When 2 Monosaccharides are linked
to each other they form a Disaccharide
galactose + glucose = ???
glucose + glucose = ???
glucose + fructose = ???
 Polymer (chain of units): polysaccharides
 Ex.: starch, cellulose, chitin, glycogen
Disaccharide:
2 simple
sugars bonded
together
Glucose
Functions of Carbohydrates
 Provide body with energy.
 What should you eat before
playing the big game?
Candy bar or pasta?
 Candy bar: contains simple
sugars, provides a short
burst of energy
 Pasta: contains starch
which takes longer to break
down, provides longer-
lasting energy
 Some carbohydrates are
indigestible by humans
such as cellulose, however,
it serves as fibers in the
digestive system.
Complex carb (ex. Starch)
Simple sugars (ex. Glucose)
Broken down to
disaccharides
Broken down further
Food Sources of
Carbohydrates
 Simple sugars are found in
most candy and sweet drinks,
fruit, vegetables, and milk.
They are quickly digested and
give a short burst of energy.
 Complex sugars (like starches)
are found in pasta, bread,
potatoes, legumes & corn. They
take longer to digest, and provide
energy longer.
Research Question
 Which elements are found in carbohydrates????
Carbohydrates: Indicator Tests
 Simple Sugars:
 Benedict’s solution
 Blue solution turns
orange/green/brown
 Complex sugars:
 Lugol’s
solution/Iodine
 Turns from orange-red-
brown to black-purple
starch
No starch
Nucleic Acids
Nucleic Acids: Structure
 Nucleic Acids are made up of monomers called
nucleotides
 Polymers (chain of units): DNA or RNA
Function of Nucleic Acids
 Stores and carries genetic information
Food Sources of Nucleic Acids
 We get nucleic acid components from vitamins and
minerals in our diet. These in turn, come from fruits,
vegetables, grains, meats, & almost anything else
you can think of with some nutritional value (no junk
food!).
Research Question
 Which elements are found in nucleic acids????
Nucleic Acids: Indicator Test
 You will not be using an indicator test for
these but in case you’re wondering…
 Dische diphenylamine test
 Turns from clear-light blue
to dark blue if nucleic acids
are present
Digestion & Reconstruction
 When macromolecules are eaten, they are digested and
broken down into their subunits (monomers).
 Inside the cells, these subunits are reconstructed into the
macromolecules we need.
Digestion Products
Macromolecule
eaten:
Broken down in stomach
to:
Carbohydrates Simple sugars (i.e. glucose)
Lipids Fatty acids & glycerol
(glycerol further broken
down to glucose)
Proteins Amino acids
Nucleic Acids Nucleotides

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Macromolecules

  • 1. The Chemistry of the Cell (Macromolecules)
  • 2. Organic Molecules • Organic molecules are those that have carbon atoms. • In living systems, large organic molecules, called macromolecules, may consist of hundreds or thousands of atoms. • Most macromolecules are polymers, molecules that consist of a single unit (monomer) repeated many times.
  • 3.
  • 4. Carbon compound formation Complex molecules can be formed by connecting carbon atoms together in a straight line or by connecting carbons together to form rings. • The presence of nitrogen, oxygen, and other atoms adds additional variety to these carbon molecules.
  • 5. Functional groups *Many organic molecules share similar properties because they have similar clusters of atoms, called functional groups. • Each functional group gives the molecule a particular property, such as acidity or polarity.
  • 7. What are Macromolecules?  Cells and their organelles are made up of smaller building blocks called macromolecules.  There are 4 basic types of macromolecules. They are:  Lipids  Proteins  Carbohydrates  Nucleic Acids
  • 8. Monomers & Polymers  Macromolecules are actually made up of even smaller subunits. Each subunit of a macromolecule is called a monomer.  The macromolecules themselves are called polymers, because they are made up of many of these subunits. Monomer: one basic unit or subunit Polymer: a chain of many basic units
  • 9. What you need to know:  Names of the 4 macromolecules  Structure- monomers and polymers of each  Function- what are they used for?
  • 11. Lipids • Lipids are organic molecules essential for life that are composed mostly of C, H, O • 4 types of lipids – fats (triglycerides) – phospholipids – steroids – waxes
  • 12. Structure of Lipids  Lipids are made up of monomers called fatty acids  fatty acids have two essential features: 1. A long hydrocarbon chain • The chain length ranges from 4 to 30 carbons 2. A carboxylic acid group
  • 13. Properties of Lipids resulted from: 1. Saturation of fatty acids with Hydrogen: Saturated f.a’s VS. Unsaturated f.a’s 2. Polarity:  Some lipids consists of Polar head (Hydrophilic) and nonpolar tail regions (hydrophobic)
  • 14. Triglycerides – Fat molecules • Structure = 3 fatty acids chains linked to glycerol • Functions = long term energy storage • Can be saturated or unsaturated Glycerol 3 fatty acids ester bond
  • 15. Saturated fats • All C bonded to H • No C=C double bonds – long, straight chain – most animal fats and butter – solid at room temperature
  • 16. Unsaturated fats • At least one C=C double bond in the fatty acids – plant & fish fats – vegetable oils – liquid at room temperature
  • 17. • Structure: 2 fatty acids (tails) + phosphate group (head) • Fatty acid chains = non-polar = hydrophobic “water fearing” • Phosphate head = polar = hydrophillic “water loving” •Function: make up cell membranes (phospholipid bilayer) Phospholipids
  • 18. Steroids • Structure: 4 fused Carbon rings • examples: – cholesterol – Function =control the fluidity of the cell membrane – hormones – Function = regulate many processes in the body – vitamins (A, B, D) – Function = supports metabolism and cell processes
  • 19. AP Biology • Solid at room temp • Insoluble in water • Function: – Protective covering for animals and plants • Examples: – Beeswax – Cuticle of leaf (keeps water in) Wax
  • 20. Functions of Lipids  Make up the cell membrane, providing cell structure  Provide insulation (fat keeps body warm)  Long-term energy storage
  • 22. Structure of Proteins  Proteins are made up of monomers (basic unit) called amino acids  There are 20 different a.a’s  Proteins are also called polypeptides dipeptide Amino acids linked by peptide bonds
  • 23. 20 Amino Acids: Some of these are polar & hydrophilic, others are non-polar and hydrophobic. Proteins can contain both kinds.
  • 24.  Proteins have complex structures. The shape of a protein determines its function!  The levels of protein structure are:  Primary structure: polypeptide chain  Secondary structure: polypeptides in coils or sheets  Tertiary structure: coils or sheets form a tangle  Quaternary structure: more than one tangle combine to make a very complex protein
  • 25. Functions of Proteins  Enzymes- proteins that speed up chemical reactions  Component of Cell membrane  Build and repair of muscles and tissues Ex. Actin, Myosin, Collagen….
  • 26. Food Sources of Proteins  Proteins are found in meat, fish, legumes, nuts, milk, eggs, grains and soy products.  There are 6 amino acids that our bodies cannot make- we can only get these from food. What are they called???
  • 27. Research Question  Which elements are found in protein????
  • 28. Proteins: Indicator Test  Biuret’s Test:  Turns from blue to purple if protein is present
  • 30. Structure of Carbohydrates  Carbohydrates are made up of monomers called monosaccharides.  Ex.: Glucose, Fructose, ….  When 2 Monosaccharides are linked to each other they form a Disaccharide galactose + glucose = ??? glucose + glucose = ??? glucose + fructose = ???  Polymer (chain of units): polysaccharides  Ex.: starch, cellulose, chitin, glycogen Disaccharide: 2 simple sugars bonded together Glucose
  • 31. Functions of Carbohydrates  Provide body with energy.  What should you eat before playing the big game? Candy bar or pasta?  Candy bar: contains simple sugars, provides a short burst of energy  Pasta: contains starch which takes longer to break down, provides longer- lasting energy  Some carbohydrates are indigestible by humans such as cellulose, however, it serves as fibers in the digestive system. Complex carb (ex. Starch) Simple sugars (ex. Glucose) Broken down to disaccharides Broken down further
  • 32. Food Sources of Carbohydrates  Simple sugars are found in most candy and sweet drinks, fruit, vegetables, and milk. They are quickly digested and give a short burst of energy.  Complex sugars (like starches) are found in pasta, bread, potatoes, legumes & corn. They take longer to digest, and provide energy longer.
  • 33. Research Question  Which elements are found in carbohydrates????
  • 34. Carbohydrates: Indicator Tests  Simple Sugars:  Benedict’s solution  Blue solution turns orange/green/brown  Complex sugars:  Lugol’s solution/Iodine  Turns from orange-red- brown to black-purple starch No starch
  • 36. Nucleic Acids: Structure  Nucleic Acids are made up of monomers called nucleotides  Polymers (chain of units): DNA or RNA
  • 37. Function of Nucleic Acids  Stores and carries genetic information
  • 38. Food Sources of Nucleic Acids  We get nucleic acid components from vitamins and minerals in our diet. These in turn, come from fruits, vegetables, grains, meats, & almost anything else you can think of with some nutritional value (no junk food!).
  • 39. Research Question  Which elements are found in nucleic acids????
  • 40. Nucleic Acids: Indicator Test  You will not be using an indicator test for these but in case you’re wondering…  Dische diphenylamine test  Turns from clear-light blue to dark blue if nucleic acids are present
  • 41. Digestion & Reconstruction  When macromolecules are eaten, they are digested and broken down into their subunits (monomers).  Inside the cells, these subunits are reconstructed into the macromolecules we need.
  • 42. Digestion Products Macromolecule eaten: Broken down in stomach to: Carbohydrates Simple sugars (i.e. glucose) Lipids Fatty acids & glycerol (glycerol further broken down to glucose) Proteins Amino acids Nucleic Acids Nucleotides