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LEPTOSPIROSIS, SALMONELLOSIS,SWINE AND
AVIAN FLU
UNIT-1
R.T.Vinodhini
• Leptospirosis is an infectious disease caused by pathogenic bacteria
called leptospires (transmitted directly or indirectly from animals to
humans)
• Human-to-human transmission occurs very rarely
• Leptospirosis is thought to be the most widespread zoonosis in the
world
LEPTOSPIROSIS
◾ Humans cangetleptospirosis - Direct contact withurine frominfectedanimals or throughwater,soil
or food contaminated with their urine
◾ Animals – Cattle,pigs,horses,dogs,rodents, andother wildanimals
◾ Rodents are the most important reservoirs for maintaining transmission in most
settings. Infection in small rodents (eg, rats) usually occurs in utero, during birth,
or during infancy from environmental contamination of the nest.
◾ Once infected, rodents are asymptomatic carriers and shed the organism in their urine
intermittently or continuously throughout life, resulting in contamination of the
environment, particularly water
Distribution:
•
•
•
•
Microbiology :
• Estimated case-fatality rates in different parts of the world have been
reported to range from <5% to 30%
• Seasonal – peak in summer, during rainy/monsoon season
Incidence:
Pathogenesis:
Symptoms:
DIAGNOSIS - LEPTOSPIROSIS
◾ ELISA:
◾ IgM antibodies against leptospires
◾ Genus specific
◾ PCR:
◾ Finding the genetic material of pathogen
◾ Microscopic agglutination test (MAT):
◾ Incubating patient serum with various serovars of leptospires
◾ Serovar that reacts with patient serum - Infecting serovar
DIAGNOSIS - LEPTOSPIROSIS
SALMONELLOSIS
◾ 1st isolated in 1884 in pigs – S.choleraesuis
◾ One of the common cause for food poisoning
◾ Affects gastrointestinal system (stomach & intestines)
◾ Gram negative bacteria
◾ Common types - S.typhimurium,S.Bongori & S.Enterica
◾ More than 2500 serotypes
◾ Many are zoonotic
SALMONELLOSIS
◾ Transmission:
◾ Fecal-oral (humans)
◾ Contaminated foods
◾ Close contact with infected animals
Symptoms:
• Diarrhea
• Fever
• Abdominal cramping
(last for 4-7 days)
• Occasionally long term illness (Reiter's syndrome)
DIAGNOSIS
◾ Diagnosis – Isolation of Salmonella organisms
◾ Serotyping & antimicrobial testing
O antigen – outer layer of cell
H antigen – filament portion of flagellum
V antigen – capsular polysaccharide
◾ PCR
◾ 90 % - Stool culture
◾ Blood
◾ Urine
SWINE FLU
◾ Commonly known as - H1N1 influenza virus
◾ H1 - Hemagglutinin & N1 – Neuraminidases
◾ Influenza viruses types –T
ype A, type B and type C
◾ InfluenzaA is the most common type and H1N1 is a
type of influenzaAm(has sub-types based on HA and
NA)
◾ Respiratory disease of pigs (cells have virus
receptors for both avian and mammalian influenza
strains
SWINE FLU
◾ Hemagglutinin‐ protein the virus uses to attach to
the host cells.
◾ Neuraminidase‐ enables the virus to be released
from the host cell.
◾ M2 Ion Channel - allows protons to move
through the viral envelope and is essential for the
virus replication process.
◾ RNP‐ Ribonucleoprotein containing the virus
RNA genome.
Influenza changes,
• By antigenic drift of HA and NA
• By cleavage of the HA
• By HA changing to bind to different receptors
DIAGNOSIS
◾ Respiratory specimen ((nasal/throat swab) - First 4 to 5 days of illness (when an
infected person is most likely to be shedding virus)
◾ However,some persons,especially children,may shed virus for 10 days or longer
.
◾ T
ests:
◾ RTPCR
◾ Rapid influenza diagnostic test
◾ Direct immunofluorescence assays
AVIAN FLU
◾ Bird flu or fowl plague
◾ InfluenzaA virus
◾ Categorized - Haemagglutinin (H 1-16) & Neuraminidase
(N1-9) subtypes
◾ Low pathogenicity avian influenza (LPAI) - H1-4,H6, H8-
16
◾ Low pathogenicity notifiable avian influenza (LPNAI) - H5
and H7
◾ Highly pathogenicity or highly pathogenic notifiable avian
influenza (HPNAI) only by mutated forms of H5 and H7
AVIAN FLU
DIAGNOSIS
◾ LP and HPAI viruses - oropharyngeal and cloacal swabs.
◾ AI viruses grow well -Allantoic sac of 9 to 11 day old
embryonating chicken eggs and they agglutinate RBCs
◾ rRT- PCR (Real Time Reverse Transcriptase PCR) -
preferred diagnostic test which gives result in 3 hours
THANK YOU

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leptospirosis, salmonellosis, swine flu and avian flu

  • 2. • Leptospirosis is an infectious disease caused by pathogenic bacteria called leptospires (transmitted directly or indirectly from animals to humans) • Human-to-human transmission occurs very rarely • Leptospirosis is thought to be the most widespread zoonosis in the world LEPTOSPIROSIS
  • 3. ◾ Humans cangetleptospirosis - Direct contact withurine frominfectedanimals or throughwater,soil or food contaminated with their urine ◾ Animals – Cattle,pigs,horses,dogs,rodents, andother wildanimals ◾ Rodents are the most important reservoirs for maintaining transmission in most settings. Infection in small rodents (eg, rats) usually occurs in utero, during birth, or during infancy from environmental contamination of the nest. ◾ Once infected, rodents are asymptomatic carriers and shed the organism in their urine intermittently or continuously throughout life, resulting in contamination of the environment, particularly water Distribution:
  • 5.
  • 6. • Estimated case-fatality rates in different parts of the world have been reported to range from <5% to 30% • Seasonal – peak in summer, during rainy/monsoon season Incidence:
  • 8.
  • 10. DIAGNOSIS - LEPTOSPIROSIS ◾ ELISA: ◾ IgM antibodies against leptospires ◾ Genus specific ◾ PCR: ◾ Finding the genetic material of pathogen ◾ Microscopic agglutination test (MAT): ◾ Incubating patient serum with various serovars of leptospires ◾ Serovar that reacts with patient serum - Infecting serovar DIAGNOSIS - LEPTOSPIROSIS
  • 11. SALMONELLOSIS ◾ 1st isolated in 1884 in pigs – S.choleraesuis ◾ One of the common cause for food poisoning ◾ Affects gastrointestinal system (stomach & intestines) ◾ Gram negative bacteria ◾ Common types - S.typhimurium,S.Bongori & S.Enterica ◾ More than 2500 serotypes ◾ Many are zoonotic
  • 12. SALMONELLOSIS ◾ Transmission: ◾ Fecal-oral (humans) ◾ Contaminated foods ◾ Close contact with infected animals
  • 13.
  • 14.
  • 15. Symptoms: • Diarrhea • Fever • Abdominal cramping (last for 4-7 days) • Occasionally long term illness (Reiter's syndrome)
  • 16. DIAGNOSIS ◾ Diagnosis – Isolation of Salmonella organisms ◾ Serotyping & antimicrobial testing O antigen – outer layer of cell H antigen – filament portion of flagellum V antigen – capsular polysaccharide ◾ PCR ◾ 90 % - Stool culture ◾ Blood ◾ Urine
  • 17. SWINE FLU ◾ Commonly known as - H1N1 influenza virus ◾ H1 - Hemagglutinin & N1 – Neuraminidases ◾ Influenza viruses types –T ype A, type B and type C ◾ InfluenzaA is the most common type and H1N1 is a type of influenzaAm(has sub-types based on HA and NA) ◾ Respiratory disease of pigs (cells have virus receptors for both avian and mammalian influenza strains
  • 18. SWINE FLU ◾ Hemagglutinin‐ protein the virus uses to attach to the host cells. ◾ Neuraminidase‐ enables the virus to be released from the host cell. ◾ M2 Ion Channel - allows protons to move through the viral envelope and is essential for the virus replication process. ◾ RNP‐ Ribonucleoprotein containing the virus RNA genome.
  • 19.
  • 20. Influenza changes, • By antigenic drift of HA and NA • By cleavage of the HA • By HA changing to bind to different receptors
  • 21. DIAGNOSIS ◾ Respiratory specimen ((nasal/throat swab) - First 4 to 5 days of illness (when an infected person is most likely to be shedding virus) ◾ However,some persons,especially children,may shed virus for 10 days or longer . ◾ T ests: ◾ RTPCR ◾ Rapid influenza diagnostic test ◾ Direct immunofluorescence assays
  • 22. AVIAN FLU ◾ Bird flu or fowl plague ◾ InfluenzaA virus ◾ Categorized - Haemagglutinin (H 1-16) & Neuraminidase (N1-9) subtypes ◾ Low pathogenicity avian influenza (LPAI) - H1-4,H6, H8- 16 ◾ Low pathogenicity notifiable avian influenza (LPNAI) - H5 and H7 ◾ Highly pathogenicity or highly pathogenic notifiable avian influenza (HPNAI) only by mutated forms of H5 and H7 AVIAN FLU
  • 23. DIAGNOSIS ◾ LP and HPAI viruses - oropharyngeal and cloacal swabs. ◾ AI viruses grow well -Allantoic sac of 9 to 11 day old embryonating chicken eggs and they agglutinate RBCs ◾ rRT- PCR (Real Time Reverse Transcriptase PCR) - preferred diagnostic test which gives result in 3 hours