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Cell lines and maintenance
BY BAVANI S
DEFINITION
 A cell line is a permanently established cell culture that
will proliferate indefinitely given appropriate fresh medium and space
The term cell line refers to the propagation of culture after the first
subculture.
In other words, once the primary culture is sub-cultured, it becomes
a cell line. A given cell line contains several cell lineages of either
similar or distinct phenotypes.
Cell lines of a mouse
TYPES OF CELL LINES
CELLLINES
CONTINUOUS CELL LINES
FINITE CELL LINES
Finite Cell Lines :
 The cells in culture divide only a limited number of times,
before their growth rate declines and they eventually die.
 The cell lines with limited culture life spans are referred to as
finite cell lines.
 The cells normally divide 20 to 100 times (i.e. is 20-100
population doublings) before extinction.
 The actual number of doublings depends on the species, cell
lineage differences, culture conditions etc.
 The human cells generally divide 50-100 times, while murine
cells divide 30-50 times before dying.
ContinuousCell Lines:
A few cells in culture may acquire a different morphology and get
altered. Such cells are capable of growing faster resulting in an
independent culture.
The progeny derived from these altered cells has unlimited life
(unlike the cell strains from which they originated). They are
designated as continuous cell lines.
 The continuous cell lines are transformed, immortal and
tumorigenic.
The transformed cells for continuous cell lines may be obtained
from normal primary cell cultures (or cells strains) by treating them
with chemical carcinogens or by infecting with oncogenic.
S.NO
CONTINOUS CELL LINES FINITE CELLS
1.
2.
3.
4.
Nomenclature of Cell Lines:
It is a common practice to give codes or designations to cell lines for
their identification. For instance, the code NHB 2-1 represents the cell
line from normal human brain, followed by cell strain (or cell line
number) 2 and clone number 1. The usual practice in a culture
laboratory is to maintain a log book or computer database file for each
of the cell lines.
While naming the cell lines, it is absolutely necessary to ensure that
each cell line designation is unique so that there occurs no confusion
when reports are given in literature. Further, at the time of
publication, the-cell line should be prefixed with a code designating
the laboratory from which it was obtained e.g. NCI for National Cancer
Institute, Wl for Wistar Institute.
No. Digits Example Comments
Generator acronym 2-6 XXXXXX Community wish
Cell line type 1 "e" or "i"
"e": embryonic stem cell
"i": induced pluripotent stem cell
Donor ID 3 001
Alphanumeric; Limited to 46,655 donors per
generator
Clone number 2-3 -A
Alphabetic; Preceded by hyphen; Limited to
702 lines per donor
Identifier for subclone (only required if
applicable)
0-3 -1
Alphanumeric; Preceded by hyphen; Limited to
1330 subclones per line
Total Characters 8-16
Minimum length 8 (institutional abbreviation
with 2 characters) without subclone
XXXXXXi001-A
Example UKBi001-A-1
Explanations
Universitaets Klinikum Bonn iPSC first donor - donor's first cell
line - subclone
Top 5 of the most commonly used cell lines!
Number 5: Sf9 insect epithelial cells
 Derived from the ovaries of the fall armyworm moth (Spodoptera frugiperda),
these cells are probably related to all insect cell lines in labs worldwide.
 Sf9cells can be cultured as adherent or suspension cells. Most cell lines are
adherent cells, which grow only on the surfaces of culture vessels.
 Sf9/baculovirus systems are typically preferred for large-scale protein
production including industrial manufacture of mammalian proteins, including
the vaccine for cervical cancer CERVARIX
Number 4: Chinese hamster ovary cells
Chinese hamster ovary cells (CHOs) are clearly ovary-derived cells, but this time, we
are talking mammalian cells.
Similarly to Sf9 cells, they can exist both as adherent or suspension cells in culture.
CHO cells are used in various applications such as recombinant protein production and
studies of the epidermal growth factor receptor
Number 3: Insert your favorite immortal human cell line here!
But depending on your favorite object of study, you may end up using a
collection such as those from the NCI-60 NCI-60 Human Tumor Cell
Lines Screen (5).
Alternatively, you might be interested in working with Jurkat or HL-60
(white blood cells), MCF-7 (breast cancer), Saos-2 cells (bone cancer),
PC3 (prostate cancer) or many others.
Number 2: HEK 293
HEK293, or human embryonic kidney-derived epithelial cells, are arguably one of the
most widely used cell lines in cell biology research.
 HEK293 is a rapidly dividing, robust line cell with a good reputation for post-
translational modification of its heterologously expressed proteins. Therefore, it’s
hardly surprising that it is often the cell line of choice in transient and stable
transformation experiments, for protein expression and production, and even in
electrophysiological experiments
Number 1: HeLa
 Henrietta’s Tumor Produced The First Immortal Human Cells Grown In Culture
 Her Cells Were Taken Without Her Knowledge Or Consent
 The Case Of The Immortal Cells Was A Medical Mystery
 Research Using HeLa Cells Led To The Creation Of The Cervical Cancer
Vaccination
 The Involvement Of HeLa Cells Helped To Create The Polio Vaccine
 Some Scientists Suggest That HeLa Cells May Be A New Species
CELL
LINE
MORPHOLOGY ORIGIN SPECIES AGE CHARACTERISTICS
A2780 Epithelial Ovary Human Adult Chemosensitive
with resistant
variants
Vero Fibroblast Kidney Monkey Adult Viral substrate
and assay
IMR-90 Fibroblast Lung Human Embryon
ic
Susceptible to
human viral
infection
WI-38 Fibroblast Lung Human Embryon
ic
Susceptible to
human viral
infection
The most commonly used terms while dealing with cell lines are
explained below.
 Splitratio :
The divisor of the dilution ratio of a cell culture at subculture.
For instance, when each subculture divided the culture to half, the
split ratio is 1: 2.
 Passage number:
It is the number of times that the culture has been sub-
cultured.
 Generation number:
It refers to the number of doublings that a cell population
has undergone. It must be noted that the passage number and
generation number are not the same, and they are totally different.
Selectionof CellLines:
Several factors need to be considered while selecting a cell line.
Some of them are briefly described:
1. Species:
In general, non-human cell lines have less risk of biohazards, hence preferred.
However, species differences need to be taken into account while extrapolating the
data to humans.
2. Finiteor continuouscelllines:
Cultures with continuous cell lines are preferred as they grow faster, easy to clone
and maintain, and produce higher yield. But it is doubtful whether the continuous
cell lines express the right and appropriate functions of the cells. Therefore, some
workers suggest the use of finite cell lines, although it is difficult.
3. Normal or transformedcells:
The transformed cells are preferred as they are immortalized and grow rapidly.
4. Availability:
The ready availability of cell lines is also important. Sometimes, it may be necessary
to develop a particular cell line in a laboratory.
5.GROWTHCHARACTERISTICS
The following growth parameters need to be considered:
i. Population doubling time
ii. Ability to grow in suspension
iii. Saturation density (yield per flask)
iv. Cloning efficiency.
6. Stability:
The stability of cell line with particular reference to cloning,
generation of adequate stock and storage are important.
7. Phenotypic expression:
It is important that the cell lines possess cells with the right
phenotypic expression.
MAINTANENCE OF CELL CULTURE
For the routine and good maintenance of cell lines in culture (primary culture or subculture) the
examination of cell morphology and the periodic change of medium are very important.
CellMorphology:
• The cells in the culture must be examined regularly to check the health status of the cells, the
absence of contamination, and any other serious complications (toxins in medium, inadequate
nutrients etc.).
ReplacementofMedium:
• Periodic change of the medium is required for the maintenance of cell lines in culture, whether
the cells are proliferating or non-proliferating. For the proliferating cells, the medium need to be
changed more frequently when compared to non-proliferating cells. The time interval between
medium changes depends on the rate of cell growth and metabolism.
• For instance, for rapidly growing transformed cells (e.g. HeLa), the medium needs to be changed
twice a week, while for slowly growing non-transformed cells (e.g. IMR-90) the medium may be
changed once a week.
Thefollowingfactorsneedto be consideredforthereplacementof themedium:
1. Cellconcentration:
The cultures with high cell concentration utilize the nutrients in the medium faster than those with
low concentration; hence the medium is required to be changed more frequently for the former.
2. A decreaseinpH:
A fall in the pH of the medium is an indication for change of medium. Most of the cells can grow
optimally at pH 7.0, and they almost stop growing when the pH falls to 6.5. A further drop in pH
(between 6.5 and 6.0), the cells may lose their viability.
The rate of fall in pH is generally estimated for each cell line with a chosen medium. If the fall is
less than 0.1 pH units per day, there is no harm even if the medium is not immediately changed.
But when the fall is 0.4 pH units per day, medium should be changed immediately.
3. Celltype:
Embryonic cells, transformed cells and continuous cell lines grow rapidly and require more
frequent sub-culturing and change of medium. This is in contrast to normal cells, which grow
slowly.
4. Morphologicalchanges:
Frequent examination of cell morphology is very important in culture techniques. Any
deterioration in cell morphology may lead to an irreversible damage to cells. Change of the
medium has to be done to completely avoid the risk of cell damage.
Cell lines and maintanence

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Cell lines and maintanence

  • 1. Cell lines and maintenance BY BAVANI S
  • 2. DEFINITION  A cell line is a permanently established cell culture that will proliferate indefinitely given appropriate fresh medium and space The term cell line refers to the propagation of culture after the first subculture. In other words, once the primary culture is sub-cultured, it becomes a cell line. A given cell line contains several cell lineages of either similar or distinct phenotypes.
  • 3. Cell lines of a mouse
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  • 6. TYPES OF CELL LINES CELLLINES CONTINUOUS CELL LINES FINITE CELL LINES
  • 7. Finite Cell Lines :  The cells in culture divide only a limited number of times, before their growth rate declines and they eventually die.  The cell lines with limited culture life spans are referred to as finite cell lines.  The cells normally divide 20 to 100 times (i.e. is 20-100 population doublings) before extinction.  The actual number of doublings depends on the species, cell lineage differences, culture conditions etc.  The human cells generally divide 50-100 times, while murine cells divide 30-50 times before dying.
  • 8. ContinuousCell Lines: A few cells in culture may acquire a different morphology and get altered. Such cells are capable of growing faster resulting in an independent culture. The progeny derived from these altered cells has unlimited life (unlike the cell strains from which they originated). They are designated as continuous cell lines.  The continuous cell lines are transformed, immortal and tumorigenic. The transformed cells for continuous cell lines may be obtained from normal primary cell cultures (or cells strains) by treating them with chemical carcinogens or by infecting with oncogenic.
  • 9. S.NO CONTINOUS CELL LINES FINITE CELLS 1. 2. 3. 4.
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  • 11. Nomenclature of Cell Lines: It is a common practice to give codes or designations to cell lines for their identification. For instance, the code NHB 2-1 represents the cell line from normal human brain, followed by cell strain (or cell line number) 2 and clone number 1. The usual practice in a culture laboratory is to maintain a log book or computer database file for each of the cell lines. While naming the cell lines, it is absolutely necessary to ensure that each cell line designation is unique so that there occurs no confusion when reports are given in literature. Further, at the time of publication, the-cell line should be prefixed with a code designating the laboratory from which it was obtained e.g. NCI for National Cancer Institute, Wl for Wistar Institute.
  • 12. No. Digits Example Comments Generator acronym 2-6 XXXXXX Community wish Cell line type 1 "e" or "i" "e": embryonic stem cell "i": induced pluripotent stem cell Donor ID 3 001 Alphanumeric; Limited to 46,655 donors per generator Clone number 2-3 -A Alphabetic; Preceded by hyphen; Limited to 702 lines per donor Identifier for subclone (only required if applicable) 0-3 -1 Alphanumeric; Preceded by hyphen; Limited to 1330 subclones per line Total Characters 8-16 Minimum length 8 (institutional abbreviation with 2 characters) without subclone XXXXXXi001-A Example UKBi001-A-1 Explanations Universitaets Klinikum Bonn iPSC first donor - donor's first cell line - subclone
  • 13. Top 5 of the most commonly used cell lines! Number 5: Sf9 insect epithelial cells  Derived from the ovaries of the fall armyworm moth (Spodoptera frugiperda), these cells are probably related to all insect cell lines in labs worldwide.  Sf9cells can be cultured as adherent or suspension cells. Most cell lines are adherent cells, which grow only on the surfaces of culture vessels.  Sf9/baculovirus systems are typically preferred for large-scale protein production including industrial manufacture of mammalian proteins, including the vaccine for cervical cancer CERVARIX Number 4: Chinese hamster ovary cells Chinese hamster ovary cells (CHOs) are clearly ovary-derived cells, but this time, we are talking mammalian cells. Similarly to Sf9 cells, they can exist both as adherent or suspension cells in culture. CHO cells are used in various applications such as recombinant protein production and studies of the epidermal growth factor receptor
  • 14. Number 3: Insert your favorite immortal human cell line here! But depending on your favorite object of study, you may end up using a collection such as those from the NCI-60 NCI-60 Human Tumor Cell Lines Screen (5). Alternatively, you might be interested in working with Jurkat or HL-60 (white blood cells), MCF-7 (breast cancer), Saos-2 cells (bone cancer), PC3 (prostate cancer) or many others. Number 2: HEK 293 HEK293, or human embryonic kidney-derived epithelial cells, are arguably one of the most widely used cell lines in cell biology research.  HEK293 is a rapidly dividing, robust line cell with a good reputation for post- translational modification of its heterologously expressed proteins. Therefore, it’s hardly surprising that it is often the cell line of choice in transient and stable transformation experiments, for protein expression and production, and even in electrophysiological experiments
  • 15. Number 1: HeLa  Henrietta’s Tumor Produced The First Immortal Human Cells Grown In Culture  Her Cells Were Taken Without Her Knowledge Or Consent  The Case Of The Immortal Cells Was A Medical Mystery  Research Using HeLa Cells Led To The Creation Of The Cervical Cancer Vaccination  The Involvement Of HeLa Cells Helped To Create The Polio Vaccine  Some Scientists Suggest That HeLa Cells May Be A New Species
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  • 18. CELL LINE MORPHOLOGY ORIGIN SPECIES AGE CHARACTERISTICS A2780 Epithelial Ovary Human Adult Chemosensitive with resistant variants Vero Fibroblast Kidney Monkey Adult Viral substrate and assay IMR-90 Fibroblast Lung Human Embryon ic Susceptible to human viral infection WI-38 Fibroblast Lung Human Embryon ic Susceptible to human viral infection
  • 19. The most commonly used terms while dealing with cell lines are explained below.  Splitratio : The divisor of the dilution ratio of a cell culture at subculture. For instance, when each subculture divided the culture to half, the split ratio is 1: 2.  Passage number: It is the number of times that the culture has been sub- cultured.  Generation number: It refers to the number of doublings that a cell population has undergone. It must be noted that the passage number and generation number are not the same, and they are totally different.
  • 20. Selectionof CellLines: Several factors need to be considered while selecting a cell line. Some of them are briefly described: 1. Species: In general, non-human cell lines have less risk of biohazards, hence preferred. However, species differences need to be taken into account while extrapolating the data to humans. 2. Finiteor continuouscelllines: Cultures with continuous cell lines are preferred as they grow faster, easy to clone and maintain, and produce higher yield. But it is doubtful whether the continuous cell lines express the right and appropriate functions of the cells. Therefore, some workers suggest the use of finite cell lines, although it is difficult. 3. Normal or transformedcells: The transformed cells are preferred as they are immortalized and grow rapidly. 4. Availability: The ready availability of cell lines is also important. Sometimes, it may be necessary to develop a particular cell line in a laboratory.
  • 21. 5.GROWTHCHARACTERISTICS The following growth parameters need to be considered: i. Population doubling time ii. Ability to grow in suspension iii. Saturation density (yield per flask) iv. Cloning efficiency. 6. Stability: The stability of cell line with particular reference to cloning, generation of adequate stock and storage are important. 7. Phenotypic expression: It is important that the cell lines possess cells with the right phenotypic expression.
  • 22. MAINTANENCE OF CELL CULTURE For the routine and good maintenance of cell lines in culture (primary culture or subculture) the examination of cell morphology and the periodic change of medium are very important. CellMorphology: • The cells in the culture must be examined regularly to check the health status of the cells, the absence of contamination, and any other serious complications (toxins in medium, inadequate nutrients etc.). ReplacementofMedium: • Periodic change of the medium is required for the maintenance of cell lines in culture, whether the cells are proliferating or non-proliferating. For the proliferating cells, the medium need to be changed more frequently when compared to non-proliferating cells. The time interval between medium changes depends on the rate of cell growth and metabolism. • For instance, for rapidly growing transformed cells (e.g. HeLa), the medium needs to be changed twice a week, while for slowly growing non-transformed cells (e.g. IMR-90) the medium may be changed once a week.
  • 23. Thefollowingfactorsneedto be consideredforthereplacementof themedium: 1. Cellconcentration: The cultures with high cell concentration utilize the nutrients in the medium faster than those with low concentration; hence the medium is required to be changed more frequently for the former. 2. A decreaseinpH: A fall in the pH of the medium is an indication for change of medium. Most of the cells can grow optimally at pH 7.0, and they almost stop growing when the pH falls to 6.5. A further drop in pH (between 6.5 and 6.0), the cells may lose their viability. The rate of fall in pH is generally estimated for each cell line with a chosen medium. If the fall is less than 0.1 pH units per day, there is no harm even if the medium is not immediately changed. But when the fall is 0.4 pH units per day, medium should be changed immediately. 3. Celltype: Embryonic cells, transformed cells and continuous cell lines grow rapidly and require more frequent sub-culturing and change of medium. This is in contrast to normal cells, which grow slowly. 4. Morphologicalchanges: Frequent examination of cell morphology is very important in culture techniques. Any deterioration in cell morphology may lead to an irreversible damage to cells. Change of the medium has to be done to completely avoid the risk of cell damage.