This is a detailed presentation on Morphology, anatomy and reproduction of Marchantia spp. with high quality pics and eye capturing transitions and animations
This is a detailed presentation on Morphology, anatomy and reproduction of Marchantia spp. with high quality pics and eye capturing transitions and animations
The topic of discussion is Pteridophytes, their general characteristics, sexual reproduction and Life cycle has been discussed along with the four different divisions that are present in Pteridophytes
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
2. Kingdom Plantae
Division Hepaticophyta
Class Hepaticopsida
Order Marchantiales
Family Marchantiaceae
Genus Marchantia
Species 65
Marchantia polymorpha, Marchantia berteroana,
Marchantia palmata, Marchantia nepalensis, etc….
3. Genus has about 65 species.
Grows best in cool, moist and shady places.
Marchantia polymorpha grows as a pioneer in
burnt forest soil.
11 species occur in India mainly in western Himalayas
M.polymorpha occurs at high altitudes in Himalayas on moist
river banks and rocks.
M.palmate occurs in Kashmir, Kumaon, South India, Bengal and
Assam.
M.simlana occurs in Himachal Pradesh.
M.nepalensis in Punjab and in Garhwal & Kumaon hills.
4. MORPHOLOGY
Plant body is prostrate, dorsiventral and
dichotomously branched…
GAMETOPHYTE
MARCHANTIA
5. A shallow groove marked by the presence
of a distinct midrib in each branch.
Many polygonal areas which demarcate the
outline of underlying air chambers.
Each polygonal area has a pore in its
center called air pore.
Gemma cups are present along the midrib.
Each branch has a growing point situated
at the apex in a groove called apical notch.
DORSAL SURFACE
UPPER DORSAL SURFACE
DORSAL SURFACE
7. RHIZOIDS
A. Unicellular and colorless
B. Two types -----------------------------
C. Smoothwalled- Inner walls are smoothand are
living cells.
D. Tuberculate- Inner walls showpeg like
ingrowths called tubercles and forms capillary
conducting system
E. Function– Anchorage and absorption of water and
minerals along with retaining moisture..
8. SCALES
A. Multicellular(one cell in thickness) and violet colored due to
presence of anthocyanin pigments.
B. Arranged in 2 rows on either side of mid-rib.
C. Two types--------------------------
D. Appendiculate– these have an apical sub-rotundappendage
and borne in the inner row of scales.
E. Ligulate– these are small, without appendage and present in
outer and middle rowof scales.
F. Function—Protection of growing point and retention of water
by capillary action…
11. On the dorsal and ventral surface of the thallus outermost single layered epidermis
is present.
The upper epidermis consists of air pores which is barrel shaped and each pore has
4-8 superimposed tiers of cells where each tier consist of a ring of 4-5 cells.
The pores have comparatively wide pore passage in the middle than on margins.
These are analogous to stomata but they cannot control the pore size like stomata.
The air chambers are present below upper epidermis.
The air chambers are separated by partition walls.
In air chamber there are photosynthetic filaments which are made up of cells which
are rich in chloroplast where food is synthesized. It is synthesizing zone.
Below synthesizing zone, there is a region of compactly arranged parenchymatous
cells, which are thin, walled that store food. It is storage zone.
Cells devoid of chloroplast and no intercellular spaces in between.
Cells contain starch and protein granules. Mucilage and oil containing cells are also
present.
Lower epidermis consists of number of rhizoids and scales.
15. Fragmentation: Occurs by death and decay of posterior portion of
thallus.
Adventitious branches: Develop on any part of thallus, separate
and grow into new plant.
A-C:
FRAGMENTATIO
N
D-
ADVENTITIO
US
BRANCHES
16. Gemma cups(2mmX3mm) are cupules
present on dorsal surface along midrib
region.
Margins are hyaline, lobed, spiny or entire.
From floor of gemma cup many small,
stalked, discoid & biconvex gemma arise.
Gemma is constricted in middle and 2
notches possess a row of apical cells.
Gemma contains chloroplast containing
cells and rhizoidal cells. Some mucilage
hairs also arise from Gemma cup’s floor
which imbibe water and help in dispersal
of gemmae.
Gemmae on coming in contact with
ground start germinating immediately.
G
E
M
M
A
E
E
G M M A E
AIR CHAMBER
MUCILAGE HAIR
RHIZOID
THALLUS
RHIZOIDAL
INITIAL
CHLOROPLASTS
18. Marchantia is dioecious.
Male reproductive organ is antheridia and the female reproductive organ is
archegonia.
They are born on the mature gametophyte and are erect and modified
stalks known as antheridiophore and archegoniophore, respectively.
Antherozoids are produced in the antheridium. They are biflagellate and
produced from the androcytes.
The archegonium is a flask-shaped structure. It consists of several neck
canal cells, a ventral canal cell and an egg.
Male and female sex organs develop on different thalli.
19. a. Antheridiophore is differentiated into Stalk and
Disc.
b. Disc is 8-lobed, each representing a single
branch of thallus.
c. Disc is thick in middle and thin towards
periphery.
d. It resembles thallus and divided into air
chambers alternating with antheridial chambers.
e. Antheridia are borne inside antheridial chambers.
f. They are arranged in 8-radiating rows on dorsal
(upper) surface of disc, reach row representing a
single branch of thallus.
Antheridiophore
21. Antheridia
The air chambers on the upper surface are
alternated with numerous flask-shaped cavities,
called the Antheridial Chambers.
The antheridial chambers open externally by a
pore, called Ostiole.
Each antheridial chamber contains a single
Antheridium.
The mature antheridium is a globular structure,
attached to the floor of the antheridial chamber
by a multicellular stalk.
The antheridium has a single layered sterile
jacket, enclosing a mass of androcytes, which
eventually metamorphose into antherozoids
(minute, rod-like biflagellate male gametes).
22. Also called Carpocephallum.
It is differentiated into Stalk and Disc.
Stalk is short and elongates after
fertilization.
Stalk is short and elongates after
fertilization.
Disc is 8-lobed directed away from
center.
Archegonia develops on upper surface of
disc in acropetal (youngest archegonium
is near growing point of lobe and oldest
in the center of disc) succession in 8-
rows.
Each row represent single lobe of thallus
and bears 12-18 archegonia.
After fertilization, stalk elongates, central
portion of disc bulges out pushing archegonia
at periphery.
It results in complete hanging (downward) of
archegonia.
It shifts youngest archegonia to reach near
stalk and oldest and fertilized towards
periphery.
Intercalary growth occurs between fertile lobes
which results in formation of radially elongated
green outgrowths called RAYS.
Archegoniophore
24. Internal structure of disc shows
photosynthetic zone consists of air
chambers.
The archegonia are arranged in 8-radiating
rows on lower surface of disc.
Archegonia are inverted and hand
downward from tissue of disc.
Each archegonia has an extra sheath called
PERIGYNIUM.
Each group of archegonia are enclosed in
2-lipped involucres called
PERICHAETIUM.
Mature archegonium is flask shaped
consists of stalk, venter and long neck.
In mature archegonium, neck canal cells
and venter canal cells disintegrate and
become mucilaginous which absorbs water
and put pressure so as to get separated.
ARCHEGONIA
COVER CELLS
VENTER
CAVITY
25. 1. Occurs in presence of water.
2. Male and female thalli of
Marchantia grow in close
compact masses.
3. The antherozoids
(biflagellate)swim in cavity of disc
of antheridiophores.
4. The antherozoids fall on disc of
archegoniophore and flows
down to its neck and fuses with
egg.
5. Haploid nucleus of antherozoids
fuses with haploid nucleus of egg
26. The zygote undergoes number of cell division during development and the
structure of zygote at that stage is called sporophyte.
Each sporophyte is divided into FOOT, SETA and CAPSULE
The basal portion of the sporophyte is called foot and middle elongated portion is
called seta.
Round globular terminal part is called capsule which consists of thread like elaters
and number of unicellular spores formed by meiotic division in spore mother cells
within capsule.
The capsule is surrounded by a layer called jacket.
The whole sporophyte is surrounded by layer of cell called calyptra. Elaters help in
spore discharge when jacket or capsule is ruptured.
The sporophyte is parasitic because it depends up on female gametophyte.
Half of the spores germinate produce male gametophyte and half germinate to
produce female gametophyte.
SPOROPHYTE::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
:::::::::::::::::::::::::
28. I. Single layered capsule wall splits
into a no. of longitudinal valves
which extend from apex towards
the middle of capsule.
II. The valves are rolled back due to
annular thickenings in jacket
cells.
III.Jerky movement of elaters due to
their hygroscopic nature leads to
loosening up of spore mass and
scattering of spores in air.
Old Archegoniophores with attached
sporophytes
Dehiscence of sporophyte..
29. 1. Spores are viable for about a year.
2. Under favorable conditions they
absorb moisture from substratum and
increase in size.
3. Chloroplasts reappear at this stage.
4. Spore undergoes repeated divisions to
form 6-8 celled filamentous structure
with a rhizoid at one end.
5. The apical cell cuts off derivatives on
lateral sides and finally give rise to
gametophyte.
Germination of Spores
30. 1) Marchantia show alternation of generation, i.e. the
haploid sexual and diploid asexual phase alternates.
2) The life cycle of Marchantia is haplodiplontic.
3) Both the haploid and diploid phases are represented
by multicellular structures.
4) The main free-living plant body is the gametophyte
(haploid).
5) The short-lived sporophyte (diploid) stage is
dependent on the gametophyte for anchorage and
nourishment.
6) The male and female gametophyte gives rise to
antherozoids and an egg respectively, which fuse to
form the diploid zygote.
7) The zygote divides by mitotic division to form a
multicellular sporophyte.
8) The spore mother cells divide by meiosis to form the
haploid spore, which germinates to form the haploid
gametophyte.
LIFE
CYCLE OF
MARCHA-
NTIA..