As an interdisciplinary field of science, bioinformatics consolidates science, software engineering, data building, arithmetic and measurements to dissect and decipher organic information. Bioinformatics has been utilized for in silico investigations of organic inquiries utilizing numerical and measurable methods.
this presentation is about bioinformatics. the contents of bioinformatics are as under:
1.Introduction to bioinformatics.
2.Why bioinformatics is necessary?
3.Goals of bioinformatics
4.Field of bioinformatics
5.Where bioinformatics help?
6.Applications of bioinformatics
7.Software and tools of bioinformatics
8.References
INTRODUCTION.
NCBI.
EMBL.
DDBJ.
CONCLUSION.
REFERENSE.
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health.
The NCBI is located in Bethesda, Maryland and was founded in 1988 through legislation sponsored by Senator Claude Pepper.
The NCBI houses a series of databases relevant to biotechnology and biomedicine. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for the biomedical literature.
All these databases are available online through the Entrez search engine.
Sequence alig Sequence Alignment Pairwise alignment:-naveed ul mushtaq
Sequence Alignment Pairwise alignment:- Global Alignment and Local AlignmentTwo types of alignment Progressive Programs for multiple sequence alignment BLOSUM Point accepted mutation (PAM)PAM VS BLOSUM
this presentation is about bioinformatics. the contents of bioinformatics are as under:
1.Introduction to bioinformatics.
2.Why bioinformatics is necessary?
3.Goals of bioinformatics
4.Field of bioinformatics
5.Where bioinformatics help?
6.Applications of bioinformatics
7.Software and tools of bioinformatics
8.References
INTRODUCTION.
NCBI.
EMBL.
DDBJ.
CONCLUSION.
REFERENSE.
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health.
The NCBI is located in Bethesda, Maryland and was founded in 1988 through legislation sponsored by Senator Claude Pepper.
The NCBI houses a series of databases relevant to biotechnology and biomedicine. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for the biomedical literature.
All these databases are available online through the Entrez search engine.
Sequence alig Sequence Alignment Pairwise alignment:-naveed ul mushtaq
Sequence Alignment Pairwise alignment:- Global Alignment and Local AlignmentTwo types of alignment Progressive Programs for multiple sequence alignment BLOSUM Point accepted mutation (PAM)PAM VS BLOSUM
This presentation gives you a detailed information about the swiss prot database that comes under UniProtKB. It also covers TrEMBL: a computer annotated supplement to Swiss-Prot.
INTRODUCTION
DEFINITION OF BIOINFORMATICS
HISTORY
OBJECTIVES OF BIOINFORMATICS
TOOLS OF BIOINFORMATICS
BIOLOGICAL DATABASES
HOMOLOGY AND SIMILARITY TOOLS (SEQUENCE ALIGNMENT)
PROTEIN FUNCTION ANALYSIS TOOLS
STRUCTURAL ANALYSIS TOOLS
SEQUENCE MANIPULATION TOOLS
SEQUENCE ANALYSIS TOOLS
APPLICATION
CONCLUSION
REFERENCES
The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules, such as proteins and nucleic acids. This presentation deals with what, why, how, where and who of PDB. In this presentation we have also included briefing about various file formats available in PDB with emphasis on PDB file format
Genomics is a discipline in genetics that applies recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble and analyze the function and structure of genomes
Bioinformatics is a hybrid science that links biological data with techniques for information storage, distribution, and analysis to support multiple areas of scientific research, including biomedicine.
Introduction
Definition
History
Principle
Components of bioinformatics
Bioinformatics databases
Tools of bioinformatics
Applications of bioinformatics
Molecular medicine
Microbial genomics
Plant genomics
Animal genomics
Human genomics
Drug and vaccine designing
Proteomics
For studying biomolecular structures
In- silico testing
Conclusion
References
This presentation gives you a detailed information about the swiss prot database that comes under UniProtKB. It also covers TrEMBL: a computer annotated supplement to Swiss-Prot.
INTRODUCTION
DEFINITION OF BIOINFORMATICS
HISTORY
OBJECTIVES OF BIOINFORMATICS
TOOLS OF BIOINFORMATICS
BIOLOGICAL DATABASES
HOMOLOGY AND SIMILARITY TOOLS (SEQUENCE ALIGNMENT)
PROTEIN FUNCTION ANALYSIS TOOLS
STRUCTURAL ANALYSIS TOOLS
SEQUENCE MANIPULATION TOOLS
SEQUENCE ANALYSIS TOOLS
APPLICATION
CONCLUSION
REFERENCES
The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules, such as proteins and nucleic acids. This presentation deals with what, why, how, where and who of PDB. In this presentation we have also included briefing about various file formats available in PDB with emphasis on PDB file format
Genomics is a discipline in genetics that applies recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble and analyze the function and structure of genomes
Bioinformatics is a hybrid science that links biological data with techniques for information storage, distribution, and analysis to support multiple areas of scientific research, including biomedicine.
Introduction
Definition
History
Principle
Components of bioinformatics
Bioinformatics databases
Tools of bioinformatics
Applications of bioinformatics
Molecular medicine
Microbial genomics
Plant genomics
Animal genomics
Human genomics
Drug and vaccine designing
Proteomics
For studying biomolecular structures
In- silico testing
Conclusion
References
Bioinformatics and its Applications in Agriculture/Sericulture and in other F...mohd younus wani
The National Center for Biotechnology Information (NCBI, 2001) defines bioinformatics as the field of science in which biology, computer science, and information technology merge into a single discipline. Fredj Tekaia defines Bioinformatics the mathematical, statistical and computing methods that aim to solve biological problems using DNA and amino acid sequences and related information. Bioinformatics has emerged as an essential field of science that is facilitating biological discoveries since more than a decade. Without the usage of bioinformatics tools it is merely impossible to capture, manage process, analyse and interpret the huge amounts data that is available especially after whole genome sequencing projects. The sequencing of the genomes of plants and animals will have enormous benefits for the agricultural community. Bioinformatics tools can be used to search for the genes within these genomes and to elucidate their functions. This specific genetic knowledge could then be used to produce stronger, drought, disease and insect resistant crops and improve the quality. In agriculture it helps in the insect resistance, improve nutritional quality, rational plant improvement, waste cleanup, climate change studies, and development of drought resistance varieties (Dahiya and Lata, 2017) and in addition to this it also plays an important roles in biotechnology, antibiotic resistance, and forensic analysis of microbes, comparative studies, evolutionary studies and veterinary Sciences.
Seri bioinformatics tools and techniques not only facilitated detection of proteomic and genomic diversity among the species/strains, but also resulted in finding a gap in the silkworm genome sequence of a strain that diverged during the course of domestication. Seri-bioinformatics databases are a valuable seri-bioresource. The available online resources on silkworm and its related organisms, including databases as well as informative websites help to make silkworms healthier, more disease resistant and more productive. These databases provides information on gene, protein sequences and diseases and play crucial roles in conservation of the silkworm species and mulberry plants (Singh et al., 216). Bioinformatics approaches give an insight, uncovering the lineage with gene and protein count of B. mori and Drosophila encompass ~18,000 and ~16,000 (Genes) and ~9,000 and ~22,000 (Proteins) respectively (Somshekar and Borgowda, 2013).
Computational Biology and BioinformaticsSharif Shuvo
Computational Biology and Bioinformatics is a rapidly developing multi-disciplinary field. The systematic achievement of data made possible by genomics and proteomics technologies has created a tremendous gap between available data and their biological interpretation.
The Significance of Lifescience- An In-depth Exploration.pdfhealthcare360social
Lifescience, an expansive and dynamic domain, unveils the enigmas of living organisms and their intricate connections with the environment. Its impact spans from molding pivotal medical advancements to influencing initiatives in conservation.
Literature Review on Development of Monoclonal Antibodies and Hybridoma Techn...Tuhin Samanta
Antibodies or immunoglobulin's are protein particles delivered by a specific gathering of cells called B-lymphocytes in creatures. These are a piece of the guard framework to ensure the body against the attacking outside substances to be specific antigens.
Monoclonal immunizer (Mab) is a solitary sort of neutralizer that is coordinated against a particular antigenic determinant (epitope). Eternal monoclonal counter acting agent are found in patients experiencing an infection called different myeloma. In 1975 George Kohler and Cesar Milstein were effectively hybridize counter acting agent delivering B-lymphocytes with myeloma cells in vitro and make a hybridoma. The creation of monoclonal immune response by half and half cells is alluded to as hybridoma innovation.
CAR T-cell Therapy_A New Era in Cancer ImmunotherapyTuhin Samanta
Illusory Antigen Receptor (CAR) T-cell treatment includes hereditary alteration of patient's autologous T-cells to express a CAR explicit for a tumor antigen, following by ex vivo cell extension and re-imbuement back to the patient. Vehicles are combination proteins of a chose single-chain section variable from a particular monoclonal immune response and at least one T-cell receptor intracellular flagging spaces. This T-cell hereditary change may happen either by means of viral-based quality exchange strategies or nonviral techniques, for example, DNA-based transposons, CRISPR/Cas9 innovation or direct exchange of in vitro deciphered mRNA by electroporation.
Detection and Enumeration of Coliforms in Ganga WaterTuhin Samanta
MPN is most generally applied for quality testing of water i.e to guarantee whether the water is protected or not as far as microorganisms present in it. A gathering of microscopic organisms normally alluded as fecal coliforms go about as a pointer for fecal pollution of water. The nearness of not many fecal coliform microbes would show that a water presumably contains no disease‑causing living beings, while the nearness of huge quantities of fecal coliform microscopic organisms would demonstrate an extremely high likelihood that the water could contain disease‑producing life forms making the water hazardous for utilization.
The transesterification procedure is a reversible response and did by blending the reactants – unsaturated fats, liquor and impetus. A solid base or a solid corrosive can be utilized as an impetus. At the mechanical scale, for the most part sodium or potassium methanolate is utilized. The finished results of the transesterification procedure are crude biodiesel and crude glycerol. In a further procedure these crude items experience a cleaning step. If there should be an occurrence of utilizing methanol as liquor FAME (unsaturated fat methyl ester) biodiesel is delivered. The cleansed glycerol can be utilized in the nourishment and corrective ventures, just as in the oleochemical business. The glycerol can likewise be utilized as a substrate for anaerobic absorption.
Biodiesel is an elective fuel like regular or 'fossil' diesel. Biodiesel can be delivered from straight vegetable oil, creature oil/fats, fat and waste cooking oil. The procedure used to change over these oils to Biodiesel is called transesterification. This procedure is depicted in more detail beneath. The biggest conceivable wellspring of appropriate oil originates from oil yields, for example, rapeseed, palm or soybean. In the UK rapeseed speaks to the best potential for biodiesel creation. Most biodiesel created at present is delivered from squander vegetable oil sourced from eateries, chip shops, modern nourishment makers, for example, Birdseye and so forth. Despite the fact that oil directly from the horticultural business speaks to the best potential source it isn't being delivered economically essentially in light of the fact that the crude oil is excessively costly. After the expense of changing over it to biodiesel has been included it is basically too costly to even think about competing with fossil diesel. Squander vegetable oil can regularly be sourced for nothing or sourced effectively treated at a little cost.
DNA fingerprinting is a research facility procedure used to set up a connection between natural proof and a suspect in a criminal examination. A DNA test taken from a wrongdoing scene is contrasted and a DNA test from a suspect. On the off chance that the two DNA profiles are a match, at that point the proof originated from that suspect. On the other hand, on the off chance that the two DNA profiles don't coordinate, at that point the proof can't have originated from the suspect. DNA fingerprinting is likewise used to build up paternity.
Literature Survey Antibiotic ResistanceTuhin Samanta
Anti-toxin obstruction happens when microscopic organisms change in light of the utilization of these medications. Microscopic organisms, not people or creatures, become anti-toxin safe. These microorganisms may contaminate people and creatures, and the diseases they cause are more diligently to treat than those brought about by non-safe microscopic organisms.
Rheology is the investigation of the progression of issue, fundamentally in a fluid state, yet in addition as "delicate solids" or solids under conditions in which they react with plastic stream as opposed to distorting flexibly because of an applied power. Rheology is the study of misshapening and stream inside a material.
LITERATURE SURVEY & MARKET SURVEY ON AMLODIPINE AND ITS RECENT TRENDSTuhin Samanta
Amlodipine is utilized with or without different drugs to treat hypertension. Bringing down hypertension forestalls strokes, respiratory failures, and kidney issues. Amlodipine has a place with a class of medications known as calcium channel blockers. It works by loosening up veins so blood can stream all the more effectively.
Literature Survey & Market Survey on Amlodipine and its Recent TrendsTuhin Samanta
Amlodipine is utilized with or without different drugs to treat hypertension. Bringing down hypertension forestalls strokes, respiratory failures, and kidney issues. Amlodipine has a place with a class of medications known as calcium channel blockers. It works by loosening up veins so blood can stream all the more effectively.
Soy items originate from soybeans. Soybeans are vegetables that have been a piece of Asian weight control plans for a considerable length of time. Soybeans are utilized to make tofu, soymilk, soy flour, miso and numerous different nourishment's. In contrast to other plant nourishments, soybeans have a high protein content, identical to creature food sources. Like meat, soy is a finished protein.
Aseptic strategy implies utilizing practices and methodology to keep pollution from pathogens. It includes applying the strictest standards to limit the danger of disease. Human services laborers utilize aseptic system in medical procedure rooms, facilities, outpatient care focuses, and other social insurance settings.
Hyperglycemia is the specialized term for high blood (glucose). High glucose happens when the body has too little insulin or when the body can't utilize insulin appropriately.
Hyperglycemia is a condition where the measure of flowing glucose (or sugar) in the circulation system is higher than ordinary. At the point when nourishment enters the stomach related framework, it is separated into glucose and enters the circulation system. This triggers a procedure that causes the pancreas to discharge insulin. Insulin is a hormone discharged by the pancreas that helps maneuver glucose into the cells of the body, where it is changed over into fuel and vitality.
Hyperglycemia is the specialized term for high blood (glucose). High glucose happens when the body has too little insulin or when the body can't utilize insulin appropriately.
How to Make a Field invisible in Odoo 17Celine George
It is possible to hide or invisible some fields in odoo. Commonly using “invisible” attribute in the field definition to invisible the fields. This slide will show how to make a field invisible in odoo 17.
The French Revolution, which began in 1789, was a period of radical social and political upheaval in France. It marked the decline of absolute monarchies, the rise of secular and democratic republics, and the eventual rise of Napoleon Bonaparte. This revolutionary period is crucial in understanding the transition from feudalism to modernity in Europe.
For more information, visit-www.vavaclasses.com
How to Create Map Views in the Odoo 17 ERPCeline George
The map views are useful for providing a geographical representation of data. They allow users to visualize and analyze the data in a more intuitive manner.
Ethnobotany and Ethnopharmacology:
Ethnobotany in herbal drug evaluation,
Impact of Ethnobotany in traditional medicine,
New development in herbals,
Bio-prospecting tools for drug discovery,
Role of Ethnopharmacology in drug evaluation,
Reverse Pharmacology.
Model Attribute Check Company Auto PropertyCeline George
In Odoo, the multi-company feature allows you to manage multiple companies within a single Odoo database instance. Each company can have its own configurations while still sharing common resources such as products, customers, and suppliers.
1. Bioinformatics & Scope In Biotechnology
Tuhin Samanta
M.Pharma in Pharmaceutical Biotechnology
(1st Year/ 2nd Semester)
2. Introduction
Bioinformatics is the short form ‘Biological Informatics’. Bioinformatics
has become an important part of many areas of biology. In
experimental molecular biology, bioinformatics techniques such as
image and signal processing allow extraction of useful results from
large amounts of raw data.
Definition: Bioinformatics is the application of compute science and
information technology to biology and medicine.
3. History
1865:- Father of Genetics: Gregor Mendel discover concept of
genetic inheritance
1930:- Electrophoresis introduced
1953:- Watson and Crick suggest double-helix model for DNA
1955:- Bovine Insulin if first protein to be sequenced
1978:- The term Bioinformatics first used
1990:- Blast program published
1994:- PRINTS database published.
4. Goals of Bioinformatics
Manage biological information.
Organize biological information using databases
Process, analyze and visualize biological data
Share biological information to the public using the internet.
5. Bioinformatics Tools and Software
BLAST- Stands for Basic local alignment search tool, provided by
NCBI, It is most widely used for sequence searching.
FASTA- It is the DNA and protein sequence alignment software
package.
EMBOSS- It Stands for European Molecular Biological Open
Software Suite.
Primer3 (version 0.4.0)- It is a freely available online software for
designing primers.
Uniprime2- It is a website for universal primer designing.
The PCR Suite- It is an online primer designing software.
Primer Pro 3.2- It is an other online primer designing software.
Primo Pro 3.4- A java enabled online primer designing tool.
6. Application of Bioinformatics
Medical
Agriculture
Comparative Studies
Microbial Genome Application
Genome Sequences
Computational Drug designing
7. Medical
o Search for new drug targets
o Personalized medicine
o Preventative medicine
o Gene therapy
Agriculture
Crop Improvement
Insect resistance
Improve nutritional quality
Grow in poorer soils and drought resistant
8. Comparative Studies
o Phylogenic properties of Disease and evolution
o Model organisms
Microbial Genome
• Alternative energy sources
• Biotechnology
• Antibiotic resistance
• Forensic analysis of microbes
• Bioweapons creation
• Evolutionary studies
9. Genome Sequences
o Genome sequencing covers to all characteristics of an organisms.
o Human, Drosophila, Rat, Mouse, Mosquito, E.coli, H.influenza, Yeast
and Arabidopsis
Computational Drug designing
• Models of drug are created
• Effects monitored with super computer
• Genetic profiling drug is assembled
• Convenient approach to design drugs
10. Biotechnological role
• DNA, RNA and Protein sequencing and Expression
• Drug design occurred at a speedy rate due to development of
bioinformatics
• Analysis and interpretation of biological data
• Genomics, proteomics, transcriptomics, cheminformatics
11. Conclusion
Bioinformatics has got major impacts on biotechnology and its
application. The vast amount of data generated by human genome
project or by other genome sequencing project would be
unmanageable without the bioinformatics technique.
Bioinformatics also quickened the drug discovery, vaccine design and
also the design of anti-microbial agents. Bioinformatics is also used
to understand gene and also genome.
12. References
• 1. Ashraf G. Heterologous expression of stress-responsive DUF538
domain containing protein and its morpho-biochemical consequences.
Plant J. 2011;30(5):351-8.
• 2. Ashraf G, Kohnehrouz SB. Identification of DUF538cDNA clone
from Celosia cristata expressed sequences of no stressed and stressed
leaves. RussJPlant Physiol. 2010;57(2):247-52.
• 3. Nakagami H, Sugiyama N, Mochida K, et al. Large-scale
comparative phosphoproteomics identifies conserved phosphorylation
sites in plants. Plant Physiol. 2010;153(3):1161-74.
• 4. Bartels D, Sunkars R. Drought and Salt Tolerance in Plants.
CritRevPlant Sci. 2005;24(1):23-58.