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Implementing
Pharmacogenetic Testing
for Mental Health Illness:
How brain biology informs and
advances treatment
opportunities
Treatment as Usual
27%
16%
41%
15%
30%
66%
44%
77%
25%
37%
0% 20% 40% 60% 80% 100%
ADHD
Schizophrenia
Bipolar Disorder
Anxiety
Depression
Initial Remission Rate
Range
Treatment Resistance / Relapse
50% of patients do not respond to first-line therapies or experience
severe adverse reactions
30% treatment resistant following 4 treatments 1
Recurrence in up to 50% 5,6
50-70% relapse rates 2,4
>75% of patients discontinued medication within 18 months 3
ADHD can persist in about 65% of adults diagnosed as children 7
STAR-D: NIMH; STEP-BD: NIMH; Angst et al. (2009); Yonkers et al. (1996);CATIE:NIMH; Perry et al. (1999); Faraone et al. (2006)
Treatment Resistance: Depression
36,8%
30,6%
13,7% 13,0%
16,3%
19,5%
25,6%
34,1%
0%
5%
10%
15%
20%
25%
30%
35%
40%
1 2 3 4
TREATMENT TRIAL
STAR-D Remission & Intolerance Rates
Remission Rates Intolerance Rates
	Rush	et	al.	(2006)
§  Founded in 2009 to improve therapeutics in neuropsychiatry
§  Co-founders: Dr. Ronald Dozoretz and Dr. Jay Lombard
§  Developed and commercialized the Genecept Assay™, a patent-
protected, saliva-based genetic test that informs clinician treatment
decisions for patients with psychiatric conditions
§  State-of-the-art CLIA , CAP, New York licensed accredited lab
§  Future R&D dedicated to being a leader in bringing personalized
medicine to neuropsychiatry by translating cutting edge science and
research to the clinic
§  Over 100k samples commercially run since launch
Data on file. Genomind 2016.
To improve the lives of patients with mental
illness by bringing innovative technologies to
clinical care
Genomind’s Mission
Evidence Base of the
Genecept Assay
§  Inclusion of genes in the panel is supported by strong peer reviewed
literature
•  Genomind’s clinical team, working closely with our SAB, assesses
the strength of the data
•  Genes were selected based on the critical examination of hundreds
of studies showing that variations in these genes can inform
treatment decisions
§  Report content is fully cited, with 200 references to date
§  Genomind has developed a full Literature Summary, summarizing each
citation related to the genetic variations analyzed
Data	on	file.	Genomind	2016.
Scientific Advisory Board
Scott T. Anderson, MD
Clinical Assistant Professor of Psychiatry
at the University of Maryland School of
Medicine and Distinguished Fellow of the
American Psychiatric Association.
Associate Medical Director and Director
of Clinical Research at The Retreat at
Sheppard Pratt.
P. Murali Doraiswamy, MD
Professor in the department of psychiatry
at Duke University Medical Center. He is
also a professor in medicine at Duke
University and a member of the Duke
Institute for Brain Sciences. He also
serves as a brain health advisor for
Men’s Health magazine.
Maurizio Fava, MD
Executive Vice Chair of the
Department of Psychiatry at the
Massachusetts General Hospital. He
also serves as Executive Director,
Clinical Trials Network and Institute
(CTNI); Director, Depression Clinical
and Research Program (DCRP) at
the MGH and is the Slater Family
Professor of Psychiatry at Harvard
Medical School.
Anil Malhotra, MD
Director of Psychiatry Research at
the Zucker Hillside Hospital in Glen
Oaks, NY, Professor of Psychiatry
and Behavioral Sciences at the
Albert Einstein College of Medicine
(AECOM) in the Bronx, NY, and an
Investigator at the Feinstein institute
for Medical Research in Manhasset,
NY.
Roy H. Perlis, MD, MSc
Director of the Center for
Experimental Drugs and
Diagnostics, Massachusetts General
Hospital Department of Psychiatry
and an Associate Professor at
Harvard Medical School.
Stephen M Stahl, MD, PhD
Adjunct Professor of Psychiatry at the
University of California, San Diego and
Honorary Visiting Senior Fellow, University
of Cambridge, U.K. He has held faculty
positions at Stanford University, the
University of California, Los Angeles, the
Institute of Psychiatry London and the
Institute of Neurology London. Dr. Stahl was
also Executive Director of Clinical
Neurosciences at the Merck Neuroscience
Research Center in the U.K. for several
years.
Rudolph E. Tanzi, PhD
Director of the Genetics and Aging
Research Unit at the Massachusetts
General Institute for
Neurodegenerative Disease in
Boston. He is also a professor of
neurology and holder of the Joseph
P. and Rose F. Kennedy Endowed
Chair in Neurology and Mental
Retardation at Harvard University.
18 Genes: Kinetic vs. Dynamic
6
Pharmacokinetic
Genes:
CYP3A4/5
CYP2D6
CYP2C19
CYP1A2
CYP2B6
CYP2C9
12
Pharmacodynamic
Genes:
SLC6A4
COMT
ADRA2A
DRD2
CACNA1C
ANK3
MC4R
5HT2C
OPRM1
GRIK1
MTHFR
BDNF
Häggström, Mikael (2014)
18 Actionable Genetic Variants
SLC6A4
Serotonin
Transporter
Use caution with SSRIs;
Atypical antidepressants
or SNRIs may be used if
clinically indicated
CACNA1C
Calcium Channel
Atypical antipsychotics, mood
stabilizers, and/or omega-3 fatty
acids, which may help reduce
excitatory signaling may be used
clinically if indicated
ANK3
Sodium Channel
Mood stabilizers, and/or omega-3
fatty acids, which may help
reduce excitatory signaling may
be used clinically if indicated
5HT2C
Serotonin Receptor 2C
Use caution with atypical
antipsychotics; Inositol may
be used to mitigate risk for
weight gain if clinically
indicated
MC4R
Melanocortin 4 Receptor
Use caution with atypical
antipsychotics
DRD2
Dopamine 2 Receptor
Use caution with
antipsychotics
COMT
Catechol-O-
Methyltransferase
Dopaminergic agents or
TMS may be used if
clinically indicated for Val/
Val patients; Use caution
with dopaminergic agents
in Met/Met patients
ADRA2A
Alpha-2A Adrenergic Receptor
Stimulant agents may be used if
clinically indicated
MTHFR
Methylenetetrahydrofolate
Reductase
Supplementation with L-
methylfolate may be used if
clinically indicated
BDNF
Brain-derived Neurotrophic
Factor
Increased physical activity /
exercise may be beneficial for
Met carriers if clinically
indicated
OPRM1
µ-Opioid Receptor
Use caution with opioid; non-
opioid analgesics may be
used if clinically indicated
GRIK1
Glutamate Receptor
Topiramate may be used for
treatment of alcohol abuse if
clinically indicated
A1298C | C677T
CYP1A2 CYP2B6 CYP2C9 CYP2C19 CYP2D6 CYP3A4/5
Dose adjustment (an increase of decrease) may be required
Pharmaco-kineticPharmaco-dynamic
Genetics 101
Nature AND Nurture
GENES Environment Phenotype
§  In psychiatry we do a good job of
determining what environmental factors
have contributed to a particular disorder
§  Until now, we have not had access to a large
component of our phenotype…..genetic
factors
GENECEPT
ASSAY
Patient
History
Personalized
Treatment
=
=
Base Pairs and SNPs
NHS National Genetics and Genomics Education Centre (2014)Karonlin, V. (2015)
C>T substitution
Types of Genetic Variation
MTHFR: C/T
DRD2: C/DEL
SLC6A4: L/S
COMT: VAL/VAL Homozygous
Heterozygous
•  Heterozygous: non-identical alleles
•  Homozygous: identical alleles
Gene X Environment Interaction
Lok	et	al.	(2013)	
1
4
MTHFR
CC
CT -----------------
TT ------------------
Genecept Assay Genes in Detail:
Pharmacokinetic Variants
CYP450 Variations
§  Gene variants associated with altered liver enzyme metabolism
activity may lead to side effects and toxicity
IM
PM Poor metabolizers or inhibitors of P450 may have
increased drug serum levels and adverse events.
IM Intermediate metabolizers or inhibitors of P450 may
have increased drug serum levels and adverse events.
EM Extensive metabolizers metabolize substrates normally.
UM Ultra-rapid metabolizers or inducers of P450 may
have reduced drug serum levels and poor efficacy.
16
FDA warning (Aug 2011): Citalopram maximum dose of 20mg in CYP2C19
poor metabolizers and those receiving CYP2C19 inhibitors
Swen et al 2011; FDA (2012)
CYP450 Substrates
•  Antidepressants: Duloxetine, Escitalopram, Fluoxetine,
Fluvoxamine, Mirtazapine, Paroxetine, TCA’s, Venlafaxine*,
Vortioxetine, Nefazodone
•  Antipsychotics: Aripiprazole, Brexpiprazole, Clozapine,
Iloperidone, Olanzapine, Risperidone, Chlorpromazine,
Fluphenazine, Haloperidol, Perphenazine, Pimozide, Thioridazine
•  Stimulants/NRI: Amphetamine, Methamphetamine, Atomoxetine
•  Pain: Codeine*, Hydrocodone*, Oxycodone, Tramadol
•  Anxiolytic/Misc: Propranolol, Clonidine
CYP2D6
•  Antidepressants: Citalopram, Escitalopram, Amitriptyline,
Clomipramine, Imipramine, Trimipramine, Venlafaxine*
•  Pain: Carisoprodol
•  Anxiolytic: Diazepam, Propranolol
•  Sleep: Suvorexant
CYP2C19
*pro-drug conversion
CYP450 Substrates
•  Antidepressants: Citalopram, Levomilnacipran,
Mirtazapine, Trazodone, Trimipramine, Vilazodone,
Nefazodone
•  Mood Stabilizer: Carbamazepine
•  Miscellaneous stimulants: Armodafinil, Guanfacine,
Modafinil
•  Anxiolytic: Alprazolam, Buspirone,
Chlordiazepoxide, Clonazepam, Diazepam
•  Pain: Alfentanil, Fentanyl, Methadone, Oxycodone,
Tramadol, Meperidine, Buprenorphine
•  Antipsychotics: Aripiprazole, Brexpiprazole,
Cariprazine, Clozapine, Lurasidone, Quetiapine,
Haloperidol, Pimozide
•  Sleep: Zolpidem, Zaleplon, Eszopiclone, Suvorexant
CYP3A4
CYP3A5
CYP450 Substrates
• Antidepressants: Clomipramine, Duloxetine, Fluvoxamine, Mirtazapine
• Antipsychotics: Asenapine, Clozapine, Olanzapine, Thiothixene, Trifluoperazine
• Pain: Cyclobenzaprine, Tizanidine, Naproxen
• Anxiolytic: Propranolol
• Sleep: Ramelteon
CYP1A2
• Antidepressants: Fluoxetine
• Mood Stabilizers: Valproate
• Pain: Celecoxib, Diclofenac, Flurbiprofen, Meloxicam, Piroxicam, NaproxenCYP2C9
• Antidepressants: Bupropion*, Selegiline
• Pain: Methadone, Meperidine
CYP2B6
*pro-drug conversion
Sample Metabolism Results
2
0
Drug Interaction Summary
CYP1A2: Gene X Environment
§  CYP1A2 is induced by
certain environmental
factors
•  CYP1A2 levels will be
increased with smokers
-  Tobacco
-  Marijuana
Zhou et al. (2009); Gunes and Dahl (2008)
CYP1A2 *1F/*1F
is a particularly
inducible gene
variant
Genecept Assay Genes in Detail:
Pharmacodynamic Variants
Serotonin Transporter (SLC6A4)
§  SLC6A4 is reported
as L(A) (normal) or
L(G) or S (risk)
§  Patients carrying the
S or L(G) allele are
at higher risk for side
effects and/or lack of
response to SSRIs
Clinical Impact:
§  Caution with SSRIs
§  Therapeutic Options:
SNRIs and Atypical
Antidepressants
Kato and Serretti (2010); Porcelli et al. (2012)
SLC6A4 Genotypes
L(A)/
L(A)
•  Higher response/
remission rates to
SSRIs
•  Lower adverse event
rates to SSRIs
L/S
•  Higher adverse event
rates to SSRIs
•  Response rates mostly
unchanged
S/S
L(G)/
L(G)
•  Lower response/
remission rates to SSRIs
•  Elevated stress induced
cortisol
•  Higher adverse event
rates to SSRIs
SLC6A4
Porcelli et al. (2012); Hu et al. (2007)
Chromosome 17
Symptoms MDD episode
Suicidality MDD/Informant
SLC6A4 Gene X Environment
Caspi et al. (2003)
SLC6A4 Sample Report
Neuronal Ion Channels and Psychiatric
Disorders
Activating GLU receptors leads to
depolarization as Na+ enters the cell.
Depolarization opens Ca++ channels
which are responsible for
neurotransmitter release
GLU
Na+
Ligand gated Na+ channel
Voltage gated Na+ channel
Ca++
Voltage gated Ca++ channel
Na+Na+
§  Homozygotes of the ANK3 ‘T’ allele or CACNA1C ‘A’ allele are at higher risk of
altered neuronal signaling
§  Clinical Impact: therapeutic options include agents that reduce neuronal
signaling such as mood stabilizers, atypical antipsychotics, omega 3 fatty acids
Ferreira et al., 2008
Serotonin 2C (5HT2C) &
Melanocortin 4 Receptor (MC4R)
2
9
Sicard et al. (2010); Malhotra et al. (2012)
Lower Risk WEIGHT GAIN Higher risk
5HT2C “T”
carrier
MC4R “A/A”
genotype
~5-15% of
patients
~5-25% of
patients
Atypical Antipsychotic
Results Report – 5HT2C and MC4R
§ Use caution with atypical antipsychotics (weight gain, NOT efficacy)
§ High risk medications: clozapine and olanzapine
§ Medium risk medications: aripiprazole; iloperidone; paliperidone; quetiapine; risperidone
§ Low risk medications: asenapine; cariprazine; brexpiprazole; lurasidone; ziprasidone
§ Metformin, Lorcaserin or other anti-obesity interventions
Dopamine Receptor (DRD2)
§  Deletions (DEL) in the dopamine receptor
gene can alter receptor density leading to
poorer outcomes with atypical and typical
antipsychotics.
§  Indicates that antipsychotics are less likely to
be effective and more likely to cause weight
gain
§  Meta analysis showed an increased risk of
opiate abuse with (DEL) carriers
Clinical Impact: Use with caution or alternative
agent
§  Antipsychotic clinical efficacy is highly correlated with the binding
affinity to the Dopamine 2 Receptor
Zang et al 2010; Chen et al. (2011)
Catechol-o-methyltransferase (COMT)
COMT graphic; Barnett et al. (2007); Hamidovic et al, (2010) Schacht (2016)
§  COMT is the primary
enzyme responsible for
dopamine degradation
in the prefrontal cortex
§  COMT VAL158MET
gene can identify the
two extremes of
dopamine metabolism
COMT Activity DA Levels Clinical Impact
High (Val/Val) Low
•  Impaired working memory
•  Higher response with dopaminergic stimulants
•  Cognitive improvement with COMT inhibitors
Low (Met/Met) High
•  Improved working memory
•  Lower response to dopaminergic stimulants
•  Improved response to SGAs
Val/ValMet/Met
COMT & Methylphenidate Response
87%
13%
Val/Val
Responders
Non-Responders
71%
29%
Val/Met
Responders
Non-Responders
58%
42%
Met/Met
Responders
Non-Responders
Kereszturi et al. (2008)
§ Response rates to methylphenidate for
ADHD treatment vary based on COMT
genotype
34
35
Response rates with Genecept Assay are comparable
regardless of the number of failed treatment trials
16%
17%
29%
49%
56%
75%
66%
69%
55%
59%
5+ failed trials
(n = NA / 181)
4 failed trials
(n = NA / 75)
Level 4
(n = 123 / 79)
Level 3
(n = 390 / 94)
Level 2
(n = 1,493 / 103)
Level 1
(n = 3,671 / 93)
Response Rates by Treatment Trials1,2
Genecept (Clinician reported) STAR*D
Response rates with Genomind
exceed those reported in the
seminal STAR*D trials
On average…
63%of patients across all levels of
treatment resistance receiving
Genecept-guided treatment
showed a clinically significant
response
1)  Levels indicate either stages of treatment in STAR*D or number of previously failed adequate treatment trials, with level
1 indicating zero previous treatment trials
2)  Response measured by ≥ 50% reduction in QIDS-SR16 (STAR*D) or CGI-I of 1 or 2 (Genecept™-Clinician Reported)
36
Clinicians report clinical improvement in majority
of patients tested with Genecept
0%
2%
11%
25%
43%
19%
6 - Much worse
5 - Minimally worse
4 - No change
3 - Minimally improved
2 - Much improved
1 - Very much improved
Patients with measurable clinical improvement – clinician
assessedⱡ
All patients (n = 625)
1 Brennan FX et al. Prim Care Companion CNS Disord. 2015; 17(2).
87%of all patients receiving
Genecept-guided treatment*
showed clinically-measurable
improvement
* In an open label clinical study1 examining the effectiveness of genetic testing with the Genecept Assay
ⱡ	Clinicians used the Clinical Global Impressions—Severity of Illness (CGI-S) scale for disease severity to assess improvement
37
Clinicians also report clinical improvement in
treatment-resistant patients tested with Genecept
0%
2%
7%
27%
44%
20%
6 - Much worse
5 - Minimally worse
4 - No change
3 - Minimally improved
2 - Much improved
1 - Very much improved
Patients with measurable clinical improvement – clinician
assessedⱡ
Treatment-resistant patients (n = 429)
1 Brennan FX et al. Prim Care Companion CNS Disord. 2015; 17(2).
91%of treatment-resistant
patients (i.e. those with 2 or
more failed medication trials)
receiving Genecept-guided
treatment* showed clinically-
measurable improvement
* In an open label clinical study1 examining the effectiveness of genetic testing with the Genecept Assay
ⱡ	Clinicians used the Clinical Global Impressions—Severity of Illness (CGI-S) scale for disease severity to assess improvement
38
The Genecept Assay influences clinician decision-
making for patients with mental health conditions
0%
10%
20%
30%
40%
50%
60%
70%
Definitely Yes Probably Yes Probably Not Definitely Not Don't Know
Influence of the Genecept Assay on Clinician Decision-Making
Did the assay influence medication decisions?
Did the assay influence confidence in medication decisions?
1 Brennan FX et al. Prim Care Companion CNS Disord. 2015; 17(2).
Clinicians made a change to the medication regimen
congruent with the assay report for 94% of patients94%
>90%of clinicians reported that the
Genecept Assay had an impact
on their treatment decisions
(n = 42 clinicians completing
assessments regarding 625 patients in
an open label clinical study1 examining
the effectiveness of genetic testing with
the Genecept Assay)
39
Case Study
§  42 y/o male, fully employed with 2 children
§  Chronic diagnosis of MDD for more than 20 years
§  Presents with refractory depression, thoughts of
sadness and suicidal ideation and mood swings
§  Fluoxetine and escitalopram led to minimal
improvement of symptoms, d/c due to inefficacy and/
or side effects
Case Study
§  What would your treatment choice be?
§  Sertraline
§  Duloxetine
§  Bupropion
§  Mood stabilizer
§  Methylfolate
Currently taking no meds, but admits to periodic ETOH binge use
Patient Results
Data on file. Genomind 2016.
Patient Results
Data on file. Genomind 2016.
Patient Results
Data on file. Genomind 2016.
Patient Results
Data on file. Genomind 2016.
Interpretation
Data on file. Genomind 2016.
Cymbalta added. Risk of induction only in presence of inducers (smoking)
Interpretation
§  L-methylfolate and Omega-3 fatty acids were also added to
the patients regimen due to the presence of variations in
MTHFR and CACNA1C
§  Also began exercise regimen BDNF MET
Data on file. Genomind 2016.
Interpretation
Data on file. Genomind 2016.
Latuda added. Low weight gain risk. Normal metabolizer.
COMT MET/MET
Follow-up
§  Patient reported
§  Stable mood, with no new depressive episodes
§  No sexual side effects
§  Reduction of HAM-D from 20 to 5
§  Reduction of depressive thoughts, suicidal ideation, and mood
swings has allowed him to become more productive in work and
in his social life
Case Study
§  34 year old, female, history of depression, anxiety, poor
focus
§  Was on stimulants as a child, takes episodically Adderall
when under stress
§  Presents with recent onset of sleep difficulty, anxiety poor
concentration and depression
§  Current medications, birth control pill, Lexapro, Klonopin
PRN
Interpretation
Data on file. Genomind 2016.
Interpretation
Data on file. Genomind 2016.
Interpretation
Data on file. Genomind 2016.
Interpretation
Data on file. Genomind 2016.
Follow-up
§  Patient reported
§  Recommendations to taper Lexapro and start mixed Serotonin/
Norepinephrine reuptake inhibitor
§  Start patient on Pristiq, (Lexapro 2C19 metabolized drug)
§  Add methlyfolate
§  Consider continuous use of low dose stimulant
§  Reduction of depressive symptoms, improved sleep
Discover the Genecept Assay
www.genomind.com
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