There are four methods to decaffeinate coffee: two solvent methods using methylene chloride or ethyl acetate, the Swiss water method, and the CO2 method. Only the Swiss water method, which uses hot water and activated charcoal filters to remove caffeine while retaining flavor compounds, is certified organic. The indirect solvent method involves soaking beans in hot water, treating the caffeine-rich water with solvent, and then reintroducing the beans to absorb remaining flavors.