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Systematic Searching in Oslo
Workshop
Janneke Staaks
March 4, 2014
Universiteitsbibliotheek
Janneke Staaks
j.staaks@uva.nl
@jstaaks
Specialist Wetenschappelijke Informatie
Psychology
Child Development and Education
Anthropology
 Formulate search question
 Documenting your search
 Database selection
 (Combining) search terms
 Search techniques
 Workflow tools
3
Learning objectives
Formulate search question
Systematic searching in databases
Inclusion / exclusion criteria
Critical appraisal (validity / relevance)
Analysing data
5
Search Technique
https://www.flickr.com/photos/sherlock77/416909735
Abstract Using a visual search methodology we investigated the effect of feared animal
stimuli on attention. Our results confirmed the important role of emotion on
attention. All participants detected fear-relevant stimuli (snakes and spiders)
faster than neutral (mushrooms) ones against a background of fruits. In addition,
spider fearful participants were sensitized specifically to detect their feared
stimulus (spiders), compared to their fear-relevant but non-feared (snakes) and
neutral stimuli. However, for participants fearful of snakes there was no
significant difference in detection latencies between the feared (snakes) and the
fear-relevant but non-feared animal stimuli (spiders). The results from the
attention task were mirrored in the emotional ratings, which showed that spider
fear was highly specific, whereas snake fear was associated with a more
generalized enhanced evaluation of all negative stimuli. (PsycINFO Database
Record (c) 2012 APA, all rights reserved) (journal abstract)
Key Concepts animal specific fears, attention measures, emotion measures, fear relevant
stimuli, feared animal stimuli
Subject
Headings
*Emotional Responses
*Fear
*Ophidiophobia
*Stimulation
Attention
Snake Phobia
link
snake phobia.ti,ab,id. 110
snake fear.ti,ab,id. 54
Ophidiophobia/ 297
1 OR 2 OR 3 373
Syntax
 Controlled vocabulary
 Subject headings, Mesh terms, Thesaurus etc.
 Ophidiophobia/
 Free text terms
 title, abstract etc. (may vary across databases)
 snake fear.ti,ab,id.
 *, ? en #
 fear* ADJ3 speak*
 speaking fears
 fearful of speaking
 fear of public speaking
 public speaking fear
 speaker’s subjective fear
Wildcards
 *, ? en #
 fear* ADJ2 speak*
 speaking fears
 fearful of speaking
 fear of public speaking
 public speaking fear
 speaker’s subjective fear
Wildcards
“A systematic review is a review of a clearly
formulated question that uses systematic and
explicit methods to identify, select, and critically
appraise relevant research, and to collect and
analyze data from the studies that are included in
the review”
11
Systematic Review and Meta-analysis
“Meta-analysis refers to the use of statistical
techniques in a systematic review to integrate the
results of included studies”
Moher, D., Liberati ,A,. Tetzlaff, J., Altman, D.G., The PRISMA Group (2009). Preferred Reporting Items for Systematic Reviews and Meta-Analyses: The
PRISMA Statement. PLoS Med 6(6): e1000097. doi:10.1371/journal.pmed1000097
12
Try this
 Reported number of results: 1.527 results
 Just ‘normal’ search terms: 18.564 results
 Just Subject Headings: 1.112 results
13
Tried this
So, what information would you like to have?
 (re)search question
 Databases
 Also: provider
 Search query
 Search terms
 Combinations
 Search results and retrieval date
 Other search techniques and sources
14
Logbook
Work in progress =>
notes and discussion points
 Copy-paste or screenshot into a text document
 MS Word
 Notepad
 Google Drive
 In the database
 Workspace (OvidSP; PsycINFO, Medline and ERIC)
15
Where
 PRISMA statement
 Preferred Reporting Items for Systematic reviews and
Meta-Analysis
16
Quality standards
http://www.flickr.com/photos/performancesolutions/7251161908/
http://www.flickr.com/photos/performancesolutions/7251161908/
 PRISMA statement
 Preferred Reporting Items for Systematic reviews and
Meta-Analysis
17
Quality standards
 Population, Intervention, Control & Outcome (PICO)
 Plus domain (diagnosis, prognosis, therapy)
 Dependent plus independent variables
 X causes Y
 X is correlated with Y
 Plus population
 Methodology
 Be practical
18
Search Strategy
 Medline vs Pubmed
 Embase
 Number of databases
 The usual suspects, plus..
 specialistic database(s)
 Citation tracking => Web of
Science/Scopus/Google Scholar
 Be practical
19
Database selection
20
Case: Assessment in Art Education
http://www.flickr.com/photos/booleansplit/3813998921
 Size and coverage
 Years of coverage,
languages
 Database usability
 Field search, special search syntax, subject headings,
number of titles that you can export to reference manager
software, etc.
 Database sustainability
 Bibliographies > catalogues (including discovery services)
21
Database selection
0
5,000,000
10,000,000
15,000,000
20,000,000
25,000,000
ERIC CINAHL PsycINFO Embase Medline
Databases
23
Search Terms
https://www.flickr.com/photos/sherlock77/416909735
 General - specific
 ethnic minority or Asian
 physiological measures or cortisol
 Synonyms and related terms
 social phobia or social anxiety or blushing
 Acronyms
 Major Depressive Disorder or MDD
Search terms
 Spelling
 US – UK: behavior or behaviour
 Single - plural: child or children
 Verb tenses: cry, crying or cried etc
 Opposites
 fertility or infertility
 Historical language
 Changes in DSM
Search terms
child*
boy*
girl*
adolesc*
26
Children 0-23
infan*
baby
babies
toddler*
preterm*
prematur*
postmatur*
perinat*
postnat*
neonat*
newborn*
new-born
pediat*
paediat*
kid
kids
teen*
young*
youth*
minors*
under ag*
underag*
juvenile*
prepubescen*
prepuberty*
preadolesc*
student*
school*
classroom*
nursery
kindergarten*
preschool*
elementary education
primary education
K-12*
K12
secondary education
junior high*
highschool*
college*
undergrad*
tertiary education
postsecondary education
universit*
27
Combining search terms
https://www.flickr.com/photos/sherlock77/416909735
You searched a database and found far too
few results. How can you broaden your
search and increase the search results?
Choose the three right answers from the
following.
A. Add search terms and combine with AND.
B. Search more fields, for example "words in
abstract".
C. Limit to the most recent publications.
D. Combine the search terms with OR.
E. Use different search terms, for example
synonyms.
RCT & SR
Diabetes
Depression AND AND
Effect of interventions for major depressive disorder
(..) in patients with diabetes mellitus
213.000 titles 17.000 titles 165.000 titles
You searched a database and found far too
few results. How can you broaden your
search and increase the search results?
Choose the three right answers from the
following.
A. Add search terms and combine with AND.
B. Search more fields, for example "words in
abstract".
C. Limit to the most recent publications.
D. Combine the search terms with OR.
E. Use different search terms, for example
synonyms.
Depression Diabetes RCT & SR
Effect of interventions for major depressive disorder
(..) in patients with diabetes mellitus
213.000 titles 17.000 titles 165.000 titles
You searched a database and found far too
few results. How can you broaden your
search and increase the search results?
Choose the three right answers from the
following.
A. Add search terms and combine with AND.
B. Search more fields, for example "words in
abstract".
C. Limit to the most recent publications.
D. Combine the search terms with OR.
E. Use different search terms, for example
synonyms.
RCT & SR
Depression
Diabetes
336 titles
213.000 titles 17.000 titles 165.000 titles
Effect of interventions for major depressive disorder
(..) in patients with diabetes mellitus
RCT & SR
Depression
213.000 titles 17.000 titles 165.000 titles
• Serial
31
Combinations
• Serial
33
Combinations
36
Apply and repeat
https://www.flickr.com/photos/sherlock77/416909735
Extra: Searching for Subject
Headings
 UvA PsycINFO thesaurus demo
 Don’t explode
 OvidSP
 EBSCO
 Proquest
 Pubmed
Other Publishers
Ophidiophobia/ OR snake fear.ti,ab.
(MH "Ophidiophobia") OR TI "snake fear"
OR AB "snake fear"
SU.EXACT("Ophidiophobia") OR
TI ("snake fear") OR AB ("snake fear")
Ophidiophobia[mh] OR "snake fear"[tiab]
 PsycINFO
 Medline
Other databases
Ophidiophobia/ OR snake fear.ti,ab,id.
Phobic disorders/ OR snake fear.ti,ab.
40
Reference Manager Software
https://www.flickr.com/photos/sherlock77/416909735
Refworks
Reference Manager
Endnote
Reference manager software and
systematic reviews
 Step 1: Export all references into folders
 One folder per database
 Most databases have a limit (500 titles per export)
 Step 2: Copy the content into one folder
 Step 3: Deduplicate
 Let the software make a selection..
 ..but check the duplicates yourself!
 Use sort and compare page numbers
And then..
 Assessment options
 Cochrane handbook: “should be done by at least two
people, independently”
 Export to excel
 Remove Author name and/or Journal title
 Work with folders or keywords to keep track of your
progress
48
Extra
https://www.flickr.com/photos/sherlock77/416909735
Update
 Logbook
 Rerun the previous year
 Consult your librarian
https://www.flickr.com/photos/beth19/4721798240
Complementary Search Strategies
 Citation tracking
 Web of Science and Google Scholar (cited by..)
 Systematic reviews and meta-analyses
 Authors
 Hand searching
 Journals
 Conference proceedings
 Consulting experts
File drawer problem
 Statistics
 Unpublished research
 Contacting authors
 Clinicaltrials.gov
 International Clinical Trials Registry Platform (ICTRP) from
the World Health Organization (WHO)
 Grey literature
 Dissertations
 Conference Proceedings
https://www.flickr.com/photos/rdennis/11948643
More information
 Cochrane handbook
 http://handbook.cochrane.org/
 Centre for Reviews and Dissemination (York)
 Database (critical assessment)
 Guidance (Book: Systematic Reviews: CRD's guidance for
undertaking systematic reviews in health care)
 Campbell collaboration
 Prisma Statement
 www.prisma-statement.org
https://www.flickr.com/photos/doug88888/6486005213
More information
 Search filters
 Cochrane Collaboration Depression, Anxiety and Neurosis
Review Group (CCDAN)
 Cochrane or Campbell Library
 Search filters – study design or focus
 Scottish Intercollegiate Guidelines Network (SIGN)
 InterTASC Information Specialists' Sub-Group Search Filter
Resource
https://www.flickr.com/photos/doug88888/6486005213

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Workshop on Systematic Searching (Oslo)

  • 1. Systematic Searching in Oslo Workshop Janneke Staaks March 4, 2014 Universiteitsbibliotheek
  • 2. Janneke Staaks j.staaks@uva.nl @jstaaks Specialist Wetenschappelijke Informatie Psychology Child Development and Education Anthropology
  • 3.  Formulate search question  Documenting your search  Database selection  (Combining) search terms  Search techniques  Workflow tools 3 Learning objectives
  • 4. Formulate search question Systematic searching in databases Inclusion / exclusion criteria Critical appraisal (validity / relevance) Analysing data
  • 6. Abstract Using a visual search methodology we investigated the effect of feared animal stimuli on attention. Our results confirmed the important role of emotion on attention. All participants detected fear-relevant stimuli (snakes and spiders) faster than neutral (mushrooms) ones against a background of fruits. In addition, spider fearful participants were sensitized specifically to detect their feared stimulus (spiders), compared to their fear-relevant but non-feared (snakes) and neutral stimuli. However, for participants fearful of snakes there was no significant difference in detection latencies between the feared (snakes) and the fear-relevant but non-feared animal stimuli (spiders). The results from the attention task were mirrored in the emotional ratings, which showed that spider fear was highly specific, whereas snake fear was associated with a more generalized enhanced evaluation of all negative stimuli. (PsycINFO Database Record (c) 2012 APA, all rights reserved) (journal abstract) Key Concepts animal specific fears, attention measures, emotion measures, fear relevant stimuli, feared animal stimuli Subject Headings *Emotional Responses *Fear *Ophidiophobia *Stimulation Attention Snake Phobia link
  • 7. snake phobia.ti,ab,id. 110 snake fear.ti,ab,id. 54 Ophidiophobia/ 297 1 OR 2 OR 3 373 Syntax
  • 8.  Controlled vocabulary  Subject headings, Mesh terms, Thesaurus etc.  Ophidiophobia/  Free text terms  title, abstract etc. (may vary across databases)  snake fear.ti,ab,id.
  • 9.  *, ? en #  fear* ADJ3 speak*  speaking fears  fearful of speaking  fear of public speaking  public speaking fear  speaker’s subjective fear Wildcards
  • 10.  *, ? en #  fear* ADJ2 speak*  speaking fears  fearful of speaking  fear of public speaking  public speaking fear  speaker’s subjective fear Wildcards
  • 11. “A systematic review is a review of a clearly formulated question that uses systematic and explicit methods to identify, select, and critically appraise relevant research, and to collect and analyze data from the studies that are included in the review” 11 Systematic Review and Meta-analysis “Meta-analysis refers to the use of statistical techniques in a systematic review to integrate the results of included studies” Moher, D., Liberati ,A,. Tetzlaff, J., Altman, D.G., The PRISMA Group (2009). Preferred Reporting Items for Systematic Reviews and Meta-Analyses: The PRISMA Statement. PLoS Med 6(6): e1000097. doi:10.1371/journal.pmed1000097
  • 13.  Reported number of results: 1.527 results  Just ‘normal’ search terms: 18.564 results  Just Subject Headings: 1.112 results 13 Tried this So, what information would you like to have?
  • 14.  (re)search question  Databases  Also: provider  Search query  Search terms  Combinations  Search results and retrieval date  Other search techniques and sources 14 Logbook Work in progress => notes and discussion points
  • 15.  Copy-paste or screenshot into a text document  MS Word  Notepad  Google Drive  In the database  Workspace (OvidSP; PsycINFO, Medline and ERIC) 15 Where
  • 16.  PRISMA statement  Preferred Reporting Items for Systematic reviews and Meta-Analysis 16 Quality standards http://www.flickr.com/photos/performancesolutions/7251161908/
  • 17. http://www.flickr.com/photos/performancesolutions/7251161908/  PRISMA statement  Preferred Reporting Items for Systematic reviews and Meta-Analysis 17 Quality standards
  • 18.  Population, Intervention, Control & Outcome (PICO)  Plus domain (diagnosis, prognosis, therapy)  Dependent plus independent variables  X causes Y  X is correlated with Y  Plus population  Methodology  Be practical 18 Search Strategy
  • 19.  Medline vs Pubmed  Embase  Number of databases  The usual suspects, plus..  specialistic database(s)  Citation tracking => Web of Science/Scopus/Google Scholar  Be practical 19 Database selection
  • 20. 20 Case: Assessment in Art Education http://www.flickr.com/photos/booleansplit/3813998921
  • 21.  Size and coverage  Years of coverage, languages  Database usability  Field search, special search syntax, subject headings, number of titles that you can export to reference manager software, etc.  Database sustainability  Bibliographies > catalogues (including discovery services) 21 Database selection
  • 24.  General - specific  ethnic minority or Asian  physiological measures or cortisol  Synonyms and related terms  social phobia or social anxiety or blushing  Acronyms  Major Depressive Disorder or MDD Search terms
  • 25.  Spelling  US – UK: behavior or behaviour  Single - plural: child or children  Verb tenses: cry, crying or cried etc  Opposites  fertility or infertility  Historical language  Changes in DSM Search terms
  • 28. You searched a database and found far too few results. How can you broaden your search and increase the search results? Choose the three right answers from the following. A. Add search terms and combine with AND. B. Search more fields, for example "words in abstract". C. Limit to the most recent publications. D. Combine the search terms with OR. E. Use different search terms, for example synonyms. RCT & SR Diabetes Depression AND AND Effect of interventions for major depressive disorder (..) in patients with diabetes mellitus 213.000 titles 17.000 titles 165.000 titles
  • 29. You searched a database and found far too few results. How can you broaden your search and increase the search results? Choose the three right answers from the following. A. Add search terms and combine with AND. B. Search more fields, for example "words in abstract". C. Limit to the most recent publications. D. Combine the search terms with OR. E. Use different search terms, for example synonyms. Depression Diabetes RCT & SR Effect of interventions for major depressive disorder (..) in patients with diabetes mellitus 213.000 titles 17.000 titles 165.000 titles
  • 30. You searched a database and found far too few results. How can you broaden your search and increase the search results? Choose the three right answers from the following. A. Add search terms and combine with AND. B. Search more fields, for example "words in abstract". C. Limit to the most recent publications. D. Combine the search terms with OR. E. Use different search terms, for example synonyms. RCT & SR Depression Diabetes 336 titles 213.000 titles 17.000 titles 165.000 titles Effect of interventions for major depressive disorder (..) in patients with diabetes mellitus RCT & SR Depression 213.000 titles 17.000 titles 165.000 titles
  • 32.
  • 34.
  • 35.
  • 37. Extra: Searching for Subject Headings  UvA PsycINFO thesaurus demo  Don’t explode
  • 38.  OvidSP  EBSCO  Proquest  Pubmed Other Publishers Ophidiophobia/ OR snake fear.ti,ab. (MH "Ophidiophobia") OR TI "snake fear" OR AB "snake fear" SU.EXACT("Ophidiophobia") OR TI ("snake fear") OR AB ("snake fear") Ophidiophobia[mh] OR "snake fear"[tiab]
  • 39.  PsycINFO  Medline Other databases Ophidiophobia/ OR snake fear.ti,ab,id. Phobic disorders/ OR snake fear.ti,ab.
  • 41.
  • 42.
  • 43.
  • 44.
  • 45. Reference manager software and systematic reviews  Step 1: Export all references into folders  One folder per database  Most databases have a limit (500 titles per export)  Step 2: Copy the content into one folder  Step 3: Deduplicate  Let the software make a selection..  ..but check the duplicates yourself!  Use sort and compare page numbers
  • 46. And then..  Assessment options  Cochrane handbook: “should be done by at least two people, independently”  Export to excel  Remove Author name and/or Journal title  Work with folders or keywords to keep track of your progress
  • 47.
  • 49. Update  Logbook  Rerun the previous year  Consult your librarian https://www.flickr.com/photos/beth19/4721798240
  • 50. Complementary Search Strategies  Citation tracking  Web of Science and Google Scholar (cited by..)  Systematic reviews and meta-analyses  Authors  Hand searching  Journals  Conference proceedings  Consulting experts
  • 51. File drawer problem  Statistics  Unpublished research  Contacting authors  Clinicaltrials.gov  International Clinical Trials Registry Platform (ICTRP) from the World Health Organization (WHO)  Grey literature  Dissertations  Conference Proceedings https://www.flickr.com/photos/rdennis/11948643
  • 52. More information  Cochrane handbook  http://handbook.cochrane.org/  Centre for Reviews and Dissemination (York)  Database (critical assessment)  Guidance (Book: Systematic Reviews: CRD's guidance for undertaking systematic reviews in health care)  Campbell collaboration  Prisma Statement  www.prisma-statement.org https://www.flickr.com/photos/doug88888/6486005213
  • 53. More information  Search filters  Cochrane Collaboration Depression, Anxiety and Neurosis Review Group (CCDAN)  Cochrane or Campbell Library  Search filters – study design or focus  Scottish Intercollegiate Guidelines Network (SIGN)  InterTASC Information Specialists' Sub-Group Search Filter Resource https://www.flickr.com/photos/doug88888/6486005213

Editor's Notes

  1. Wouldyoubeabletoreplicatethis?Publication range: 1980 -2009Steel, Z., Chey, T., Silove, D., Marnane, C., Bryant, R. A., & Van Ommeren, M. (2009). Association of torture and other potentially traumatic events with mental health outcomes among populations exposed to mass conflict and displacement. JAMA: The Journal of the American Medical Association, 302(5), 537-549.
  2. NB. Is waarschijnlijk een combinatie van subject headings en identifiers (1551 en 724; samen 1422)
  3. Prisma statement is opvolger QUORUM (QUality Of Reporting Of Meta-Analyses)
  4. Prisma statement is opvolger QUORUM (QUality Of Reporting Of Meta-Analyses)
  5. DatabaseRecordsERIC1,300,000CINAHL2,600,000PsycINFO3,300,000Embase20,000,000Medline21,000,000
  6. Twee leerdoelen; zelf uitzoeken hoe een zoekmachine werkt, plus wat handige zoekfunctionaliteiten
  7. 48 zoektermen
  8. Twee leerdoelen; zelf uitzoeken hoe een zoekmachine werkt, plus wat handige zoekfunctionaliteiten
  9. Let op: je blijft zelf verantwoordelijk voor de correctheid van je referenties. Refworks en zoekmachines kunnen dit niet geheel foutloos.
  10. Also: www.psychfiledrawer.org