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WHY DOES DRUG RESISTANCE
READILY EVOLVE BUT VACCINE
RESISTANCE DOES NOT?
JAISHREE.S
II M.Sc MEDICAL MICROBIOLOGY
INTRODUCTION
 A vaccine is a biological preparation that provides active aquired immunity to a
particular disease. It contains an agent which resembles a disease causing
microorganism and its often made from weakened or killed forms of a microbe,
its toxins or one of its surface proteins.
 The terms vaccine and vaccination are derived from Variolae vaccinae (smallpox
of the cow) – Edward Jenner.
 A vaccine helps the body’s immune system to recognize and fight pathogens like
viruses or bacteria, which then keeps us safe from the diseases they cause.
 WHO(2019) reported that vaccination prevents 2-3 million deaths each year.
 Drugs are the substances which has a physiological effect when ingested or
introduced into the body.
 Drug resistance is the reduction of effectiveness of a medication in treating a
disease. It is due to over prescription of antibiotics, or patient not finishing the
entire antibiotic course, misuse of antibiotics,, and so on.
 Drugs and vaccines both impose substantial pressure on the pathogen
population to evolve resistance and indeed drug resistance typically emerges
soon after the introduction of the drug. But vaccine resistance has only rarely
emerged.
vaccine
Live attenuated Inactivated Subunit(purified) Toxoid
VACCINEANDITSTYPES:
 Tuberculosis
 Oral polio
 Measles
 Yellow fever
 rotavirus
 Whole cell pertussis
 Inactivated polio
 Haemophilus
influenzae - B
 Pneumococcal
 Hepatitis B
 Tetanus toxoid
 Diphtheria toxoid
DRUGS VACCINES
Therapeutically Prophylactically
specific metabolic pathway Multitarget
• Multiple 1. Antigen
2. Epitopes
•Immunity itself act like combination
therapy with more component effector
Resistance readily evolves invitro that
minimizes spatial variation in drug
dose
Induce systemic host responses that may
minimize spatial refugia and spatial
heterogeneity within hosts.
Resistance-Rare
Population size has already reached the
transmissible state.
Indirectly reduces the pathogen
population size through herd immunity.
Drugs remain active in environmental
reservoirs and also within the hosts.
Vaccines are active only while the
pathogens are inside the hosts.
How Vaccines Works
Vaccine containing antigen
Stimulates antibody against pathogen
After vaccination, the pathogen when exposes for
the first time, which contain antigenic features
similar to the vaccine, there is quick defense against
it.
S.No Vaccine Prevents I Dose I-II Dose II-III Dose III-IV Dose IV-V Dose
1 BCG TB & bladder cancer Birth
2 HepB Hepatitis B Birth 4 weeks 8 weeks
3 Poliovirus Polio Birth 4 weeks 4 weeks
4 DTP Diphtheria, Tetanus & Pertussis 6 weeks 4 weeks 4 weeks 6 M(Booster 1)
3 years
(Booster
2)
5 Hib Bacterial infection 6 weeks 4 weeks 4 weeks 6 M (Booster 1)
6 PCV Pneumonia 6 weeks 4 weeks 4 weeks 6 M (Booster 1)
7 RV Diarrheal Disease 6 weeks 4 weeks 4 weeks
8 Typhoid Typhoid Fever
9
months
15 months
(Booster 1)
9 MMR Measles, Mumps & Rubella
9
months
6 months
10 Varicella Chickenpox 1 year 3 months
11 HepA Liver disease 1 year 6 months
12 Tdap Diphtheria, Tetanus & Pertussis 7 years
13 HPV Some Cancers & Warts 9 years
Age: 9-14 years:
6 months.
Age: 15 or more: 1
month
Age- 15 or
more: 5
months
IMMUNIZATION SCHEDULE - 2020
Vaccine resistance
vaccine resistance is the reduction in
effectiveness of the vaccine.
Natural
evolution
Pathogen
evolution
PATHOGEN EVOLUTION
 The evolution of bacterial pathogenicity, it is mainly by the tremendous evolutionary
pressure for resistance.
The evolutionary changes includes
 serotype replacement
(similar to the opportunistic infection caused by Clostridium difficile appearing
after drugs were used to treat a different pathogen)
 novel serotypes
 antigenic loss
 antigenic drift
Vaccines generally provide sustained disease control, the evolution of vaccine resistance
is so rare that vaccines are now considered a leading solution to the drug resistance
problem.
Pathogen evolution always undermines drugs but rarely undermines vaccines. For
example, it is common to associate drugs with bacterial diseases and vaccines with viral
diseases, and might wonder bacteria evolve more resistance than virus. But that cannot be
a general explanation; viruses rapidly evolve resistance to antiviral drugs.
EVOLUTION OF DRUG AND VACCINE RESISTANCE
Hepatitis B
Shortly after the introduction of vaccination, mutant strains of Hepatitis B Virus
were observed in vaccinated hosts.
The first reported case of vaccine resistance occurred in Italy.
Series of study was conducted in Taiwan, sequencing of Hepatitis B viruses was
performed which infected the children, reported that prevalence was due to
‘escape mutants’ which has the ability to escape antibody detection and antibody
neutralization.
These escape mutants may lead to reinfection with Hepatitis B Virus.
Currently the use of Recombinant vaccines has successfully reduced the disease
incidence.
Pneumococcal conjugate vaccine
The human pathogen Streptococcus pneumoniae has shown evidence of evolution
after the introduction of Pneumococcal conjugate vaccine.
Scientists till now have discovered more than 90 distinct serotype for Streptococcus
pneumoniae .
First they targeted 7 serotypes(prevnar 7), and completely eliminated infections with seven
targeted serotypes but other rarer serotypes caused disease.
The vaccine resistance in this vaccine is mainly by serotype replacement.
Ongoing vaccination for streptococcus pneumoniae is PCV13.
Bordetella pertussis
 Initially, this evolution appeared consistent with strain replacement, where
strains of pertussis dissimilar to vaccine strains increased in frequency.
First whole cell vaccine was used that gained resistance hence acellular vaccine
are now in present vaccination procedures. Acellular vaccines protect against
disease, but may not prevent infection and transmission.
 After the introduction of acellular vaccine, strains of pertussis that did not
produce pertactin(immunogenic virulence factor)
Consistent with the expectation of vaccine-driven evolution, pertactin-negative
strains were more common in vaccinated than unvaccinated patients.
VACCINE RESISTANCE
-Absence Of Vaccine Resistance
1.Measles
Frankandbush-tradeoffbetweenrapidpathogentransmissionandantigenicflexibility
kallandetal.-unusuallylowmutationrateforRNAvirus
schragetal-mutatesatratessimilartothatofRNAvirus
therefore,antigenicconstraintmightbethepropertyofmeaslesvirus,itisnotaninherent
propertyofvaccinetargets.
2.Polio&Smallpox
naturalimmunitywhichpathogenevolutionfailedtoevadedespiteofintenseselectionfor
thousandsofyears(childhooddiseases)becausetheyarebroadlycrossreactive.
-RESISTANCEAND THEIR FACTORS
therearetwokeyfactorstheyare
1.timingofaction
2.multiplicityoftherapeutictargetswithandbetweenhosts
1. TIMING OF ACTION
 Pathogen replication during this incubation period creates opportunities for
mutations to arise , while pathogen transmission after this incubation period
creates opportunities for mutations to spread to new hosts.
 Drugs are administered therapeutically, (after the symptoms arise).
at this therapeutic treatment, the pathogen population within the host can
be enormous , already accumulated genetic diversity and become
transmissible.
 Larger the microbial population at the time of treatment the more likely the
evolution of drug resistance.
 Vaccines keeps the pathogen population from achieving larger sizes,
reducing the accumulation of diversity and onward transmission.
 Therefore, prophylactic nature of vaccines reduces the opportunities for
resistance to emerge and spread.
Pathogen Population size
in an untreated host.
Later treatment
(drugs)
EFFECT OF TREATMENT TIMING ON THE EVOLUTION OF
RESISTANCE IN A SINGLE INFECTION
Early treatment
(vaccine)
2. MULTIPLICITY OF THERAPEUTIC TARGETS
WITHIN AND BETWEEN HOSTS
The evolution of resistance may be slowed by therapeutic redundancy, where microbial
population is controlled in multiple efficacious ways. They are:
Combination Therapy
Simultaneous use of different drugs to same host.
Benefit: resistance only occurs when there is simultaneous acquisition of resistance for
each component drug.
example: HIV, Tuberculosis
It prevents the within host evolution of drug resistance, when patients are fully compliant.
For example, influenza virus evolved resistance to monoclonal antibodies, resistance was
reduced when the different monoclonal antibodies were used simultaneously
Treatment Mosaics
Simultaneous use of different drugs in different hosts.
Benefit: create heterogeneity in selection.
It will slow or prevents the spread of resistance., once it has emerged
For example, approximately 100 unique tetanus-toxoid-specific antibodies
can be observed in healthy humans after receiving a tetanus-toxoid booster
vaccine, with these antibodies being unique between subjects. The high
multiplicity of therapeutic vaccine targets thus reduces the chance that
resistance will originate and the ability of resistance to spread
Classical example for vaccine resistance
Marek’s disease(Gallid herpes virusII)
 highly contagious, paralyzing and ultimately deadly disease affecting chickens and
poultry industry.
 Marek’s disease has been sickening chickens globally for over a century; birds catch it
by inhaling dust laden with viral particles shed in other birds’ feathers.
 Two generations of vaccines were undermined by viral evolution. Those vaccines
prevented disease but even before the pathogen evolved.
 But they did not prevent the viral replication, infection and transmission. Hence this
virus reached large population size in vaccinated hosts and vaccine induced selection
was able to act during the transmission between the hosts.
 The benefits of prophylaxis were thus missing.
 The first vaccine was introduced in 1970, when the disease was killing entire flocks.
Second vaccine introduced in 1983, currently on third vaccine. Fourth vaccine is on line
CONCLUSION
1. Drugs are used therapeutically whereas vaccines are used prophylactically.
2. Drugs attack fewer target sites, but vaccine multitargets.
3. Vaccines prevent infection and transmission and induce immunity against many
pathogen target sites, hence hard the evolution of vaccine resistance.
4. The 2 main key factors for vaccine resistance is
 Timing Of Action
 Multiplicity Of Therapeutic Targets.
5. Other features of drugs and vaccines are likely to have at their best only
moderate or system specific effect on the rate of resistance evolution.
6. Host immune system have been shaped by coevolution between pathogen and
hosts. Microorganisms have been coevolving with drug effectors long before the
medical use of drugs and vaccines.
RECENTUPDATES
 Measles deemed to be eliminated in 2000
because of vaccination success. Re-
emergence has been associated with
resistance to vaccination.
 (large measles outbreaks such as in
ukraine, philiphines and israel).
 This occurred – when an unvaccinated
individual visits an endemic measles
area, returned back home, children tends
to develop infection.
How Vaccines Resistance Works
Natural Evolution
time
time
Vaccine effective against antigens on
targeted pathogens
Random mutations
Vaccine loses its effectiveness
against pathogen population
Key
1. Random
mutations
2. Effective vaccine
antibody
antigen
Vaccine-Driven Evolution
time
time
vaccine
vaccine
Pathogen Antigens
Antigen on survivors
Surviving population expands
Antigen on survivors
Pathogen less vulnerable to vaccine
Key
1. Pathogen antigens
2. Survivors

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vaccine resistance

  • 1. WHY DOES DRUG RESISTANCE READILY EVOLVE BUT VACCINE RESISTANCE DOES NOT? JAISHREE.S II M.Sc MEDICAL MICROBIOLOGY
  • 2. INTRODUCTION  A vaccine is a biological preparation that provides active aquired immunity to a particular disease. It contains an agent which resembles a disease causing microorganism and its often made from weakened or killed forms of a microbe, its toxins or one of its surface proteins.  The terms vaccine and vaccination are derived from Variolae vaccinae (smallpox of the cow) – Edward Jenner.  A vaccine helps the body’s immune system to recognize and fight pathogens like viruses or bacteria, which then keeps us safe from the diseases they cause.  WHO(2019) reported that vaccination prevents 2-3 million deaths each year.
  • 3.  Drugs are the substances which has a physiological effect when ingested or introduced into the body.  Drug resistance is the reduction of effectiveness of a medication in treating a disease. It is due to over prescription of antibiotics, or patient not finishing the entire antibiotic course, misuse of antibiotics,, and so on.  Drugs and vaccines both impose substantial pressure on the pathogen population to evolve resistance and indeed drug resistance typically emerges soon after the introduction of the drug. But vaccine resistance has only rarely emerged.
  • 4. vaccine Live attenuated Inactivated Subunit(purified) Toxoid VACCINEANDITSTYPES:  Tuberculosis  Oral polio  Measles  Yellow fever  rotavirus  Whole cell pertussis  Inactivated polio  Haemophilus influenzae - B  Pneumococcal  Hepatitis B  Tetanus toxoid  Diphtheria toxoid
  • 5. DRUGS VACCINES Therapeutically Prophylactically specific metabolic pathway Multitarget • Multiple 1. Antigen 2. Epitopes •Immunity itself act like combination therapy with more component effector Resistance readily evolves invitro that minimizes spatial variation in drug dose Induce systemic host responses that may minimize spatial refugia and spatial heterogeneity within hosts. Resistance-Rare Population size has already reached the transmissible state. Indirectly reduces the pathogen population size through herd immunity. Drugs remain active in environmental reservoirs and also within the hosts. Vaccines are active only while the pathogens are inside the hosts.
  • 6. How Vaccines Works Vaccine containing antigen Stimulates antibody against pathogen After vaccination, the pathogen when exposes for the first time, which contain antigenic features similar to the vaccine, there is quick defense against it.
  • 7. S.No Vaccine Prevents I Dose I-II Dose II-III Dose III-IV Dose IV-V Dose 1 BCG TB & bladder cancer Birth 2 HepB Hepatitis B Birth 4 weeks 8 weeks 3 Poliovirus Polio Birth 4 weeks 4 weeks 4 DTP Diphtheria, Tetanus & Pertussis 6 weeks 4 weeks 4 weeks 6 M(Booster 1) 3 years (Booster 2) 5 Hib Bacterial infection 6 weeks 4 weeks 4 weeks 6 M (Booster 1) 6 PCV Pneumonia 6 weeks 4 weeks 4 weeks 6 M (Booster 1) 7 RV Diarrheal Disease 6 weeks 4 weeks 4 weeks 8 Typhoid Typhoid Fever 9 months 15 months (Booster 1) 9 MMR Measles, Mumps & Rubella 9 months 6 months 10 Varicella Chickenpox 1 year 3 months 11 HepA Liver disease 1 year 6 months 12 Tdap Diphtheria, Tetanus & Pertussis 7 years 13 HPV Some Cancers & Warts 9 years Age: 9-14 years: 6 months. Age: 15 or more: 1 month Age- 15 or more: 5 months IMMUNIZATION SCHEDULE - 2020
  • 8. Vaccine resistance vaccine resistance is the reduction in effectiveness of the vaccine. Natural evolution Pathogen evolution
  • 9. PATHOGEN EVOLUTION  The evolution of bacterial pathogenicity, it is mainly by the tremendous evolutionary pressure for resistance. The evolutionary changes includes  serotype replacement (similar to the opportunistic infection caused by Clostridium difficile appearing after drugs were used to treat a different pathogen)  novel serotypes  antigenic loss  antigenic drift Vaccines generally provide sustained disease control, the evolution of vaccine resistance is so rare that vaccines are now considered a leading solution to the drug resistance problem. Pathogen evolution always undermines drugs but rarely undermines vaccines. For example, it is common to associate drugs with bacterial diseases and vaccines with viral diseases, and might wonder bacteria evolve more resistance than virus. But that cannot be a general explanation; viruses rapidly evolve resistance to antiviral drugs.
  • 10. EVOLUTION OF DRUG AND VACCINE RESISTANCE
  • 11. Hepatitis B Shortly after the introduction of vaccination, mutant strains of Hepatitis B Virus were observed in vaccinated hosts. The first reported case of vaccine resistance occurred in Italy. Series of study was conducted in Taiwan, sequencing of Hepatitis B viruses was performed which infected the children, reported that prevalence was due to ‘escape mutants’ which has the ability to escape antibody detection and antibody neutralization. These escape mutants may lead to reinfection with Hepatitis B Virus. Currently the use of Recombinant vaccines has successfully reduced the disease incidence.
  • 12. Pneumococcal conjugate vaccine The human pathogen Streptococcus pneumoniae has shown evidence of evolution after the introduction of Pneumococcal conjugate vaccine. Scientists till now have discovered more than 90 distinct serotype for Streptococcus pneumoniae . First they targeted 7 serotypes(prevnar 7), and completely eliminated infections with seven targeted serotypes but other rarer serotypes caused disease. The vaccine resistance in this vaccine is mainly by serotype replacement. Ongoing vaccination for streptococcus pneumoniae is PCV13.
  • 13. Bordetella pertussis  Initially, this evolution appeared consistent with strain replacement, where strains of pertussis dissimilar to vaccine strains increased in frequency. First whole cell vaccine was used that gained resistance hence acellular vaccine are now in present vaccination procedures. Acellular vaccines protect against disease, but may not prevent infection and transmission.  After the introduction of acellular vaccine, strains of pertussis that did not produce pertactin(immunogenic virulence factor) Consistent with the expectation of vaccine-driven evolution, pertactin-negative strains were more common in vaccinated than unvaccinated patients.
  • 14. VACCINE RESISTANCE -Absence Of Vaccine Resistance 1.Measles Frankandbush-tradeoffbetweenrapidpathogentransmissionandantigenicflexibility kallandetal.-unusuallylowmutationrateforRNAvirus schragetal-mutatesatratessimilartothatofRNAvirus therefore,antigenicconstraintmightbethepropertyofmeaslesvirus,itisnotaninherent propertyofvaccinetargets. 2.Polio&Smallpox naturalimmunitywhichpathogenevolutionfailedtoevadedespiteofintenseselectionfor thousandsofyears(childhooddiseases)becausetheyarebroadlycrossreactive. -RESISTANCEAND THEIR FACTORS therearetwokeyfactorstheyare 1.timingofaction 2.multiplicityoftherapeutictargetswithandbetweenhosts
  • 15. 1. TIMING OF ACTION  Pathogen replication during this incubation period creates opportunities for mutations to arise , while pathogen transmission after this incubation period creates opportunities for mutations to spread to new hosts.  Drugs are administered therapeutically, (after the symptoms arise). at this therapeutic treatment, the pathogen population within the host can be enormous , already accumulated genetic diversity and become transmissible.  Larger the microbial population at the time of treatment the more likely the evolution of drug resistance.  Vaccines keeps the pathogen population from achieving larger sizes, reducing the accumulation of diversity and onward transmission.  Therefore, prophylactic nature of vaccines reduces the opportunities for resistance to emerge and spread.
  • 16. Pathogen Population size in an untreated host. Later treatment (drugs) EFFECT OF TREATMENT TIMING ON THE EVOLUTION OF RESISTANCE IN A SINGLE INFECTION Early treatment (vaccine)
  • 17. 2. MULTIPLICITY OF THERAPEUTIC TARGETS WITHIN AND BETWEEN HOSTS The evolution of resistance may be slowed by therapeutic redundancy, where microbial population is controlled in multiple efficacious ways. They are: Combination Therapy Simultaneous use of different drugs to same host. Benefit: resistance only occurs when there is simultaneous acquisition of resistance for each component drug. example: HIV, Tuberculosis It prevents the within host evolution of drug resistance, when patients are fully compliant. For example, influenza virus evolved resistance to monoclonal antibodies, resistance was reduced when the different monoclonal antibodies were used simultaneously
  • 18. Treatment Mosaics Simultaneous use of different drugs in different hosts. Benefit: create heterogeneity in selection. It will slow or prevents the spread of resistance., once it has emerged For example, approximately 100 unique tetanus-toxoid-specific antibodies can be observed in healthy humans after receiving a tetanus-toxoid booster vaccine, with these antibodies being unique between subjects. The high multiplicity of therapeutic vaccine targets thus reduces the chance that resistance will originate and the ability of resistance to spread
  • 19. Classical example for vaccine resistance Marek’s disease(Gallid herpes virusII)  highly contagious, paralyzing and ultimately deadly disease affecting chickens and poultry industry.  Marek’s disease has been sickening chickens globally for over a century; birds catch it by inhaling dust laden with viral particles shed in other birds’ feathers.  Two generations of vaccines were undermined by viral evolution. Those vaccines prevented disease but even before the pathogen evolved.  But they did not prevent the viral replication, infection and transmission. Hence this virus reached large population size in vaccinated hosts and vaccine induced selection was able to act during the transmission between the hosts.  The benefits of prophylaxis were thus missing.  The first vaccine was introduced in 1970, when the disease was killing entire flocks. Second vaccine introduced in 1983, currently on third vaccine. Fourth vaccine is on line
  • 20. CONCLUSION 1. Drugs are used therapeutically whereas vaccines are used prophylactically. 2. Drugs attack fewer target sites, but vaccine multitargets. 3. Vaccines prevent infection and transmission and induce immunity against many pathogen target sites, hence hard the evolution of vaccine resistance. 4. The 2 main key factors for vaccine resistance is  Timing Of Action  Multiplicity Of Therapeutic Targets. 5. Other features of drugs and vaccines are likely to have at their best only moderate or system specific effect on the rate of resistance evolution. 6. Host immune system have been shaped by coevolution between pathogen and hosts. Microorganisms have been coevolving with drug effectors long before the medical use of drugs and vaccines.
  • 21.
  • 22. RECENTUPDATES  Measles deemed to be eliminated in 2000 because of vaccination success. Re- emergence has been associated with resistance to vaccination.  (large measles outbreaks such as in ukraine, philiphines and israel).  This occurred – when an unvaccinated individual visits an endemic measles area, returned back home, children tends to develop infection.
  • 23. How Vaccines Resistance Works Natural Evolution time time Vaccine effective against antigens on targeted pathogens Random mutations Vaccine loses its effectiveness against pathogen population Key 1. Random mutations 2. Effective vaccine antibody antigen
  • 24. Vaccine-Driven Evolution time time vaccine vaccine Pathogen Antigens Antigen on survivors Surviving population expands Antigen on survivors Pathogen less vulnerable to vaccine Key 1. Pathogen antigens 2. Survivors