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The Red Headed Neanderthal




           Carl Zimmer
  Medical Humanities and the Arts
          Yale University
       December 16, 2010
Image: Photograph by Joe McNally, National Geographic
Man’s Place in Nature,
Thomas Huxley, 1863
“Even of the Germans,
Caesar remarks that the
Roman soldiers were
unable to withstand their
aspect and the flashing of
their eyes, and that a
sudden panic seized his
army.”
“The Irish were voracious
cannibals, and considered it
praiseworthy to eat the
bodies of their parents.”
1909 reconstruction by Frantisek Kupka based on the work of Marcellin Boule
M. Balter, Science 2009, 323:870
Building The New
  Neanderthal




                   Courtesy of Blaine Maley
Ponce de Leon et al, PNAS 2008 105: 13764–13768
Stone tools for spear tips, butchering,
  cleaning hides, fashioning clothes




    http://www.pnas.org/content/105/38/14241/F1.large.jpg
Image: Photograph by Joe McNally, National Geographic
Balter, Science 2009, 326:1056
Burial at Shanidar




Artwork by Karen Carr http://www.karencarr.com/tmpl1.php?CID=529
50,000 year-old shell with
 perforation and pigment
    (right: underside)




Zilhão et al, PNAS 2010 107:1023-1028
The Symbolic Neanderthal?




                      Image:Viktor Deak
http://www.independent.co.uk/news/science/science-unlocks-neanderthal-secrets-1608222.html
•   Characteristic differences
    between a classic Neandertal
    and an early modern
    European

•   Each trait can be found in
    both groups, varying in degree
    and frequency, but they tend
    to appear as suites of features
Caveat lector:
                               the relationships
                                 between some
                               hominin species
                                 is a subject of
                                intense debate!




Zimmer, Smithsonian Intimate
    Guide to Human Origins
Stoneking, EMBO Reports 2008 9:S46-S50
http://www.eva.mpg.de/neandertal/press/presskit-neandertal/images/Image12_highRes.jpg
The genes say replacement...




    Briggs et al, 2009, Science 325:318
Lagar Velho Skeleton: Hybrid child?




                                                Image: José Paulo B. Ruas
                           PNAS June 22, 1999 vol. 96 no. 13 7604-7609
In Search of the Neanderthal Genome
R E Green et al. Science 2010;328:710-722
R E Green et al. Science 2010;328:710-722



Published by AAAS
What Genes Do
 We Share?




                Courtesy of Blaine Maley
What Genes
Don’t We Share?




                  Courtesy of Blaine Maley
What Genes Do
 We Share?




                Courtesy of Blaine Maley
Foxp2: The “Language Gene”?




                          Zimmer, The Tangled Bank
Language without Art?




Hohle Fels Cave,            Chauvet Cave,
35,000 years old           ~30,000 years old
What Genes
Don’t We Share?




                  Courtesy of Blaine Maley
The Biology of Redheads
Carles Lalueza-Fox, et al. Science 318, 1453 (2007); DOI: 10.1126/science.1147417
Image: Photograph by Joe McNally, National Geographic
Other genes that differ between modern
       humans and Neandertals
RPTN: Encodes the protein repetin, expressed in skin, sweat glands,
hair roots, and tongue papilli

TRPMI: Encodes melastatin, a protein that helps maintain skin
pigmentation

THADA: Associated with type 2 diabetes in humans; evolutionary
changes may have affected energy metabolism

DYRK1A: Found in an area critical for causing Down syndrome

NRG3: Mutations associated with schizophrenia

CADPS2, AUTS2: Mutations implicated in autism

RUNX2(CBRA1): Causes cleidocranial dysplasia, characterized by
delayed closure of cranial sutures, malformed clavicles, bell-shaped
rib cage, and dental abnormalities

SPAG17: Protein important for the beating of the sperm flagellum
                                                                        Adapted from Gibbons,
                                                                       Science, 2010 328:680-684
Why are we here, and why are they gone?




Artwork by Karen Carr: http://www.karencarr.com/tmpl1.php?CID=486
Burial at Shanidar




Artwork by Karen Carr http://www.karencarr.com/tmpl1.php?CID=529
Burial at Shanidar




Churchill et al, Journal of Human Evolution 57 (2009) 163–178
      Artwork by Karen Carr http://www.karencarr.com/tmpl1.php?CID=529
Burial at Shanidar




Churchill et al, Journal of Human Evolution 57 (2009) 163–178
      Artwork by Karen Carr http://www.karencarr.com/tmpl1.php?CID=529
M. Balter, Science 2010, 330:900
Ponce de Leon et al, PNAS 2008 105: 13764–13768
Humans: Smaller brains for better living?




           Dashes: chimpanzees.
            Solid lines: humans
           Circles: Neanderthals
   Ponce de Leon et al, PNAS 2008 105: 13764–13768
Not quite gone: 1-4% of non-African DNA is Neanderthal




             Stoneking, EMBO Reports 2008 9:S46-S50
weblo.com
Text




http://www.dailymail.co.uk/sciencetech/article-1323455/Weve-suspected-official-Ozzy-Osbourne-IS-Neanderthal.html
George Church, Harvard
http://www.guardian.co.uk/music/2010/nov/05/ozzy-osbourne-genes-sequenced-genome
Hmmm....
For more information, please visit carlzimmer.com




                Thanks to Kate Wong
                               Image: Photograph by Joe McNally, National Geographic

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The Red Headed Neandertal

Editor's Notes

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  29. Selective sweep screen. (A) Schematic illustration of the rationale for the selective sweep screen. For many regions of the genome, the variation within current humans is old enough to include Neandertals (left). Thus, for SNPs in present-day humans, Neandertals often carry the derived allele (blue). However, in genomic regions where an advantageous mutation arises (right, red star) and sweeps to high frequency or fixation in present-day humans, Neandertals will be devoid of derived alleles. (B) Candidate regions of selective sweeps. All 4235 regions of at least 25 kb where S (see SOM Text 13) falls below two standard deviations of the mean are plotted by their S and genetic width. Regions on the autosomes are shown in orange and those on the X chromosome in blue. The top 5% by S are shadowed in light blue. (C) The top candidate region from the selective sweep screen contains two genes, ZFP36L2 and THADA. The red line shows the log-ratio of the number of observed Neandertal-derived alleles versus the number of expected Neandertal-derived alleles, within a 100 kilobase window. The blue dots above the panel indicate all SNP positions, and the green dots indicate SNPs where the Neandertal carries the derived allele.\n
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  33. So, we can now see exactly how that small slice of DNA has changed over the past 6 million years.\n\nNow, it’s one thing to pinpoint the differences in the sequences of the chimp and human genome. It’s another thing to link them to the important differences between chimps and humans themselves. Scientists have barely started to take that next step, and it’s going to take a long long time before they’re done. But it’s hardly a futile search. We’re already learning a lot about one of the most important traits of humans, language.\n
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  35. It’s also when you see the first extraordinary signs of the modern human mind, like these cave paintings 32,000 years ago. \n\nCould it be that a rapid mutation to the FOXP2 in our African ancestors was the spark to this explosion?\n
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