Secondary ion mass spectrometry (SIMS) is an analytical technique that bombards a sample surface with a primary ion beam, causing charged secondary ions to emit. These secondary ions are then analyzed using mass spectrometry to determine their mass-to-charge ratios. SIMS has high sensitivity and can detect elements down to parts-per-million or parts-per-billion levels. It provides both elemental and molecular composition of solid surfaces with good depth resolution and lateral resolution in the 2-5 nm and 20 nm to 1 μm range, respectively. SIMS finds applications in composition analysis, depth profiling, trace detection in semiconductors, and imaging of surfaces.
A scanning electron microscope (SEM) is a type of electron microscope that produces images of a sample by scanning the surface with a focused beam of electrons.
A scanning electron microscope (SEM) is a type of electron microscope that produces images of a sample by scanning the surface with a focused beam of electrons.
Localising Charged Particles by Electric and Magnetic Fields
the trapping of charged particles
Prepared By : Mohamed Fayed Mohamed Ali
Email : M10513fayed@gmail.com
SEM is a technique that provides information such as topography, composition and crystallographic information of an object.
Scanning electron microscopes use a beam of highly energetic electrons to examine objects on a very fine scale.
SEM produces images by detecting secondary electrons that are emitted from the surface due to excitation from a primary electron beam.
The TEM is a very powerful tool for material science.
TEM can be used to study the growth of layers, their composition and defects in semiconductors.
High resolution can be used to analyze the quality, shape, size and density of quantum wells, wires and dots.
Introduction to nanoscience and nanotechnologyaimanmukhtar1
Introduction of nanoscience/nanotechnology ,properties/potential applications of nanomaterials and electrodeposition of metal single component and alloy nanowires in AAO template
An isotope is one of two or more atoms having the same atomic number but different mass numbers.
Unstable isotopes are called Radioisotopes.
uses of radioisotopes are many which are discussed in this slide.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Multi-source connectivity as the driver of solar wind variability in the heli...Sérgio Sacani
The ambient solar wind that flls the heliosphere originates from multiple
sources in the solar corona and is highly structured. It is often described
as high-speed, relatively homogeneous, plasma streams from coronal
holes and slow-speed, highly variable, streams whose source regions are
under debate. A key goal of ESA/NASA’s Solar Orbiter mission is to identify
solar wind sources and understand what drives the complexity seen in the
heliosphere. By combining magnetic feld modelling and spectroscopic
techniques with high-resolution observations and measurements, we show
that the solar wind variability detected in situ by Solar Orbiter in March
2022 is driven by spatio-temporal changes in the magnetic connectivity to
multiple sources in the solar atmosphere. The magnetic feld footpoints
connected to the spacecraft moved from the boundaries of a coronal hole
to one active region (12961) and then across to another region (12957). This
is refected in the in situ measurements, which show the transition from fast
to highly Alfvénic then to slow solar wind that is disrupted by the arrival of
a coronal mass ejection. Our results describe solar wind variability at 0.5 au
but are applicable to near-Earth observatories.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
2. Outline
o Introduction
o Basic principle
o Basic overview
o Ion gun
o Energy and Mass Analyzer
o Ion Detectors
o Advantages and limitations
o Applications
3. Mass Spectroscopy
Mass spectrometry (MS) is an analytical technique that measures mass to
Charge ratio of charged particles.
Secondary ion mass spectrometry
Secondary ion mass spectrometry (SIMS) is based on the observation of
charged particles (Secondary Ions) are ejected from a sample surface when
bombarded by a primary beam of heavy particles.
Introduction
4. o Bombardment of a sample surface with a primary
ion beam (Ip) followed by mass spectrometry of
the emitted secondary ions (Is) constitutes
secondary ion mass spectrometry.
o SIMS is a surface analysis technique used to
characterize the surface and sub-surface region
of materials
o It has used in two modes Static SIMS mode and
Dynamic SIMS mode
Basic Principle
6. Ion Gun
o Electrons into a vacuum chamber.
o Small amount of argon gas , It become
ionized by interacting with free
electron and forming a plasma.
o The plasma is then accelerated
through a series of at least two highly
charged grids, and becomes an ion
beam, moving at fairly high speed
from the aperture of the device.
o O2
+, O-, Cs+, Ar+, Xe+, Ga+, etc
o Beam angle : 0 - 60 deg.
o Beam energy : 0.5 - 20 keV
o Beam diameter : typical 10 ~ 100 µm, extreme 0.1 µm
7. o It has other two types for liquid and
solid ion sources
o For Cesium atoms vaporize through a
porous tungsten plug and are ionized
during evaporation
o For Liquid Metal Ion Gun (LMIG),
operates with metals or metallic
alloys
Other ion Gun
8. o Ions has different
energy
o Electrostatic energy
analyzer
o Low energy strongly
deflected than High
energy Ions
o Movable energy slit
used to selected
energy ions
Ion Energy Analyzer
9. Ion Mass Analyzer
o BS ion pass though Magnetic
field
o Ions are acted force on
right angle to magnetic
field and ion beam direction
o Deflection of ion species is
given by the equation
o Magnetic field measured by Semiconductor Hall probe
10. Ion Detector
Modern mass spectroscopy has more than one detector.
There are four types of detectors.
o Electron Multiplexer
o Faraday Cup
o Micro-Channel Plate
o RAE Image Detector
11. Electron Multiplexer
o It has series of Dynodes
o Each dynode is connected to a resistor
chain
o The first dynode is at ground potential,
so that both positive or negative ions may
be detected. The last dynode can be b/w
+1500 to +3500 V depending on the age
and type of multiplier.
o When a BS Ion strikes the first dynode it
may produce a few (1, 2 or 3) secondary
ions. These secondary electrons are
accelerated to the second dynode that is
held at a slightly higher positive potential.
o Finally these ions are pass to counting
system
12. Faraday Cup
o The Faraday cup detector consists of a
hollow conducting electrode connected
to ground via a high resistance.
o The ions hitting the collector cause a
flow of electrons from ground through
the resistor.
o The resulting potential drop across the
resistor is amplified. A plate held at
about -80 V in front of the collector,
prevents any ejected secondary
electrons from escaping and causing
an anomalous reading.
13. Micro-Channel Plate
o It has ion image plate consists of an array
of miniature electron multipliers composed
of lead glass.
o Typically the ion multipliers or channels,
are about 10 µm in diameter, 400 µm long
and about 7O from the perpendicular to
the plate face.
o They are located about 12 µm between
centers and number up to 2000 in a 25 m
m array. The front face of the plate is held
at ground potential, while the back plate
may be between +1000 to +2000V.
o Rest of the things just like electron
multiplexer
14. RAE Image Detectors
o The resistive anode encoder is a
position-sensitive detector, it is used
to digitally record ion images.
o The resulting ions pulse strikes a
resistive plate comprising a thick
resistive film, deposited on a ceramic
plate. The geometry of the detector
designed to avoid image distortion.
o The charge pulse is partitioned off
to four electrodes at the corners of
the plate.
o where the X and Y position is
calculated by the equations
17. Advantages and Limitations
Advantages
o All elements detectable and isotopes can be distinguished.
o Detection limits of ppm for most elements and ppb for favorable elements.
o Good depth resolution (2~5 nm) and lateral resolution (20 nm ~ 1 µm)
Insulator analyzable
o Chemical information obtained from relative molecular ion abundances.
Limitations
o Mass interferences.
o Secondary ion yields are often matrix dependent.
o Numerous secondary standards are required to quantify data.
o Flat surface required for best depth resolution and for ion microscopy.
o Destructive analysis.
18. o Composition of solid surfaces
o Surface analysis
o Ion mapping
o Depth Profile
o Trace detection in semiconductors
o Analysis and depth profiling of thin layers
o Imaging of surfaces
Applications of SIMS
19. o SIMS can be used to analyze the composition of organic and
inorganic solids.
o SIMS can generate spatial or depth profiles of elemental or
molecular concentrations.
o To detect impurities or trace elements, especially in semiconductors
and thin filaments.
o Secondary ion images have spatial resolution on the order of
0.5 to 5 μm. The depth resolution is around 2 to 5 nm.
o Detection limits for trace elements range between 1012 to
1016 atoms/cm3. That is around ppb ~ ppm.
o SIMS is the most sensitive elemental and isotopic surface
microanalysis technique. However, very expensive.
Summary
20. o Secondary Ion Mass Spectrometry – A Practical Handbook f
or Depth Profiling and Bulk Impurity Analysis, by R. G. Wilso
n, F. A. Stevie, and C. W. Magee, Wiley- Interscience, 1989
o Precise and fast secondary ion mass spectrometry depth pr
ofiling of polymer materials with large Ar cluster ion beams,
by S. Ninomiya
Reference