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Restriction
Fragment
Length
Polymorphism
• Genetic markers resulting from the
variation or change in the length of
defined DNA fragments produced by
digestion of the DNA sample with
restriction endonucleases.
• Use: Southern blots
Advantages
• Variants are Co-dominant
• Measures variation at the level
of DNA sequence, not protein
sequence
• Ubiquitous ( large number of
markers , probe –enzyme
combinations .)
Disadvantages
• Labor intensive
• Requires relatively large
amounts of DNA
• Time consuming .
DNA markers
Hybridization
based markers
RFLPs Minisatellites Microsatellites
PCR-based
markers
RAPDs MP-PCR AFLPs SSRs SCoT

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