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Annals of Clinical and Medical
Case Reports
Research Article ISSN 2639-8109 Volume 12
Afzal AM*
Department of Microbiology, Government College University, Faisalabad, 38000 Pakistan
In-Vitro Evaluation of Heavy Metal Tolerance and Biosorptive Potential of Two Native
Strains of Bacillus Cereus Against Nickel and Cobalt
*
Corresponding author:
Abuzar Muhammmad Afzal,
Department of Microbiology, Government College
University, Faisalabad, 38000 Pakistan
Received: 10 Nov 2023
Accepted: 15 Dec 2023
Published: 26 Dec 2023
J Short Name: ACMCR
Copyright:
©2023 Afzal AM. This is an open access article
distributed under the terms of the Creative Commons
Attribution License, which permits unrestricted use, dis-
tribution, and build upon your work non-commercially
Citation:
Afzal AM, In-Vitro Evaluation of Heavy Metal Toler-
ance and Biosorptive Potential of Two Native Strains
of Bacillus Cereus Against Nickel and Cobalt. Ann Clin
Med Case Rep. 2023; V12(5): 1-11
United Prime Publications LLC., https://acmcasereport.org/ 1
Keywords:
Heavy metal contamination; Textile effluent;
Bacillus cerus; Bioremediation
1. Abstract
Heavy metal contamination now a day is one of the major global
environmental concerns and industrial effluent is commonly used
for irrigation. Increasing industrial rate in the modern world is re-
sponsible for increase in concentration of heavy metals. Present
study was designed to isolate and identify some indigenous heavy
metal tolerant bacteria from textile effluents. Two isolates were
screened out showing maximum tolerable concentration and mul-
ti metal resistance to Ni and Co and were named as AMIC2 and
AMIC3. Molecular characterization confirmed AMIC2 as (Bacil-
lus cerus, accession number LT838345) and AMIC3 as (B. cerus,
accession number LT838346). Biosorptive potential was accessed
using Inductively Coupled Plasma-Optical Emission Spectroscopy
and it was found that AMIC2 reduced Ni (48.4%, 49%) and Co
(70.6%, 73.6%) after 24 and 48 hours respectively while AMIC3
reduced Ni (50.6%, 51.8%) and Co (71.8%, 73.2%) after 24 and
48 hours respectively. Fourier transform infrared spectroscopy was
used to analyze the functional groups and overall nature of chem-
ical bonds in isolates while Scanning Electron Microscope was
performed to detect outer morphological changes in the bacteria
in response to metal stress. Overall results suggested that bacteria
possessed significant bioremediation potential and could be used
in the development of bioremediation agents.
2. Introduction
In general, “Heavy Metal” is a broad term, which is used for the
group of metals and metalloids having atomic density greater than
4000 kg m-3 or 5 times more than water. Heavy metal contamina-
tion now a day is one of the major global environmental concerns
and the main sources of heavy metal contamination are either natu-
ral or anthropogenic. Depending on soil pH and their specification
these heavy metals can become mobile in soils and in this way,
a small part of the total mass can leach to aquifer or can become
bioavailable to living organisms (Hookoom, 2013) [17]. Industrial
wastewater is commonly used for irrigation in most of the develop-
ing third world countries (Bouwer et al., 2002) [9]. Without proper
treatment, release of heavy metals in effluent poses a menace to
public health because of its persistence, biomagnifications and ac-
cumulation in food chain (Issazadeh, 2014) [18]. As the number
of industries is being increased day by day in the modern world,
with this the concentration of heavy metals is also being increased.
Cadmium, chromium, mercury, lead, nickel, cobalt and copper are
mainly found in the industrial wastewater (Smrithi, 2012) [42].
Several studies have been conducted to elaborate the effects of
these heavy metals on living organisms including animals, plants
and human (Chisti, 2004) [11]. In recent years, the use of microbes
for removal of heavy metals has achieved great attention. Vari-
ous microorganisms such as bacteria (Shuttlework et al., 1993)
[40], yeast (Salinas et al., 2000) [34], fungi (Anoop et al. 1999)
[5], algae (Ahuja et al., 1999) [5], and plants (Chen et al., 1996)
[10] have been reported to tolerate and remove heavy metals from
aqueous solutions. Bioremediation is a potential cost-effective
solution for the remediation of heavy metal contaminated envi-
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Volume 12 Issue 5 -2023 Research Article
ronment (Congeevaram et al., 2007) [12]. The advantages of using
microbes for bio-remediation include natural occurrence, cheap
production, easy availability to treat large volumes of wastewater
due to rapid kinetics and high selectivity in terms of removal and
recovery of specific metals (Genter, 1996) [15]. Indigenous organ-
isms have the ability to adopt themselves according to the prevail-
ing environments and could flourish under these conditions (Haq,
2000) [16]. Variety of mechanisms has been developed by some
microorganisms to deal with high concentrations of heavy metals
and usually is specific to one or a few metals (Piddock, 2006).
Most microorganisms, posses the efflux of metal ions outside the
cell, and genes for tolerance mechanisms has been found on both
chromosomes and plasmids (Hookoom, 2013) [17]. Some bacte-
ria can use mechanisms of tolerance and detoxification of heavy
metals and still produce chelating agents that bound metals and
reduce their toxicity (Kavamura and Esposito, 2010) [20]. Many
living bacteria have been reported to reduce or to transform toxic
contaminants into their less toxic forms (Solecka et al., 2012) [43].
Faisalabad is the 3rd biggest city in Pakistan after Karachi and
Lahore. It is the 2nd biggest city in the province of Punjab after
Lahore, and a major industrial center. The city is also known as
the “Manchester of Pakistan” (Jaffrelot, 2002). The surrounding
countryside, irrigated by the lower Chenab River, produces cotton,
wheat, sugarcane, vegetables and fruits. Due to the heavy industri-
alization different types of waste is being produced by the different
industries. The textile zone is playing a vital role in the export
of the country but at the same time a lot of environmental pollu-
tion is being produced by this zone. It is one of the main polluters
in industrial sectors in the compass of degree and the chemical
composition of the discharged runoff. Inept dyeing processes of-
ten result in considerable residuals of dyes. The presence of these
dyes in effluent is considered to be very problematic because of the
persistent and recalcitrant nature (Yasar et al., 2013) [50]. There-
fore, it is need of the time to analyze these wastes for the isolation
and characterization of some indigenous strains of heavy metal
tolerant (HMT) bacteria and to explore their potential in bioreme-
diation of common heavy metals founds in such effluents. Keeping
in view the above, present study was conducted for the isolation,
identification and molecular characterization of indigenous HMT
bacterial strains from textile effluent and to evaluate their biosorp-
tive potential against heavy metals.
3. Meterials & Methods
3.1. Sample Collection & Heavy Metals Analysis
Wastewater samples were collected from the textile effluent. 06
main drains present in and around Faisalabad, Pakistan receiving
the textile effluents and surrounding different textile units were se-
lected. From each drain, 05 samples were taken keeping the dis-
tance of about 1000 meter between two points (Baby et al., 2014)
[7]. After collection, samples were processed for determination of
heavy metals i.e., Cobalt (Co), Chromium (Cr), Nickel (Ni), Lead
(Pb) and Zinc (Zn). Samples were digested by following the pro-
tocol as previously described by Sinha et al. (2014) [41] and metal
analysis was done by using Atomic Absorption Spectrophotometer
(AAS) (Hitachi Polarized Zeeman AAS, Z-8200, Japan) following
the conditions described in AOAC (1990) [6]. Based on the results
of metal analysis, Nickel (Ni) and Cobalt (Co) were selected for
further study.
3.2. Isolation of Hmt Bacteria
Tenfold serial dilutions of effluents were prepared in sterile dis-
tilled water up to 10-5 as described by Lucious et al. (2013) [23].
Isolation of Ni and Co tolerant bacteria was done through spread
plate method as described by Samanta et al. (2012) [35].
3.3. Determination of Maximum Tolerable Concentration
(MTC)
MTC of heavy metal was selected as its highest concentration that
allowed visible bacterial growth after 48 to 96 hours of incubation.
The increasing concentration of both heavy metals (Ni and Co) i.e.
(0.5 mM, 1 mM, 1.5 mM, 02 mM, 2.5 mM, 03 mM, 3.5 mM, 04
mM, 4.5 mM, 05 mM, 5.5 mM, 06 mM, 6.5 mM, 07 mM, 7.5 mM,
08 mM, 8.5 mM, 09 mM, 9.5 mM, and 10 mM) were added in
pre-sterilized nutrient agar plates for testing the MTCs of bacteria
(Vashishth and Khanna, 2015) [46].
3.4. Multi Metal Resistance (MMR)
MMR of bacteria was determined by inoculating them on nutrient
agar medium incorporated with Ni, Co and Cr in equal concentra-
tion i.e. (1:1:1) as described by Saini and Pant (2016) [33].
3.5. Identification of Bacteria
After 48 hours of incubation, colonies were selected on the basis
of morphology, shape and color. All the isolates were purified by
repeated streaking on nutrient agar and stored at 4°C for further
studies. Identification up to genus level was done on the basis of
cultural characteristics, microscopic examination after Gram’s
staining (shape, arrangement and staining character), and physio-
logical/biochemical characteristics (motility, oxidase reaction, cat-
alase reaction, glucose utilization & fermentation tests and starch
hydrolysis). All identification tests were performed following the
protocols mentioned in Bergey’s Manual of Determinative Bacte-
riology.
3.6. Molecular Characterization
Ribotyping was done for the molecular characterization of identi-
fied HMT bacteria by amplifying 16S rRNA gene. Total genomic
DNA was extracted by CTAB method (Wilson, 2001) [49]. Poly-
merase Chain Reaction (PCR) was used for the amplification of
16S rRNA using 16S rRNA PCR primers, PA (5 ́-AGAGTTT-
GATCCTGGCTCAG-3 ́, and PH (5 ́-AAGGAGGTGATCCAGC-
CGCA-3 ́) (Zaheer et al. 2016) [51].
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3.7. Phylogenetic Analysis
The 16S rRNA gene from the pure culture sequences from the
NCBI database were aligned using Clustal X (Thompson et al.,
1997) [45] and the maximum likelihood (ML)-based phylogenet-
ic tree was constructed using MEGA (version 6) (Tamura et al.
2013) [44]. Confidence in the tree topology was evaluated using
bootstrap resampling methods (1000 replications), and bootstrap
values of at least 50% that demonstrated good support measures
were retained.
3.8. Effect of Ni and Co on Bacterial Growth
To observe the effect of Ni and Co separately on bacterial growth,
growth curve experiment was conducted in nutrient broth. For this
purpose, nutrient broth tubes with Ni (01mM), Co (01mM) and
without Ni and Co (control) were prepared. For each bacterial iso-
late 100 ml medium was taken in one set consisting of 08 test
tubes for all three groups (i.e., two with metals and one control),
autoclaved and then inoculated with 20 μL of freshly prepared in-
oculum. These tubes were incubated in shaking incubator at 37ºC
at 100 rpm. Then after 0, 4, 8, 12, 16, 20, 24 and 28 hours one tube
out of 08 in each group was removed and absorbance was meas-
ured at 600 nm. Growth curve was plotted by the readings obtained
from the experiment and compared (Shakoori et al., 2010) [38].
3.9. Evaluation of Biosorption Potential
Biosorption potential of indigenously isolated and characterized
bacterial strains named as AMIC2 and AMIC3 was determined
against two metals i.e., Ni and Co. For this purpose, one set (each
containing 02 glass culture bottles) having capacity of 500ml was
prepared for each strain supplemented with 200 ml of LB broth
with initial metal concentration of 50ppm for both metals. After
autoclaving each set was inoculated with 02 ml of 18-hour old
bacterial culture having turbidity equal to 0.5McFarland turbid-
ity solution. Culture bottles were kept under constant agitation
at 37oC for 24 and 48 hours then centrifuged at 14000 rpm for
05 minutes and supernatants were collected and stored at -20oC
for heavy metal analyses. Heavy metals present in solution were
measured through Inductively Coupled Plasma-Optical Emission
Spectroscopy (ICP-OES) (Ramyakrishna and Sudhamani, 2016)
[32].
3.10. FT-IR Analysis of Bacterial Biomass
FT-IR was used to analyze the functional groups and overall na-
ture of chemical bonds in bacterial strains. Infrared spectra of the
control (bacteria grown without metal stress) and tested (bacte-
ria grown with metal stress, Ni or Co) biomass were obtained by
grinding 02mg of freeze-dried biomass with 200mg dry potassi-
um bromide (KBr) powder (1:100) ratio in agate mortar. Obtained
mixture was pressed to get translucent sample discs using pressure
bench press. The FT-IR analysis was performed by using Perkin-
Elmer Spectrum Version 10.4.3. The spectral data were collected
over the range of 450- 4000 cm-1 (Ramyakrishna and Sudhamani,
2016) [32].
3.11. Scanning Electron Microscopy (SEM)
Outer morphology of the bacterial cells before and after biosorp-
tion was examined using SEM (Carl Zeiss Supra 55 Gemin; Ger-
man Technology, Jena, Germany). Prepared samples were placed
on the sample holder (stub) with carbon tape. In order to increase
the electron conduction and to improve the quality of micrographs,
a conductive layer of gold was made with portable SC7620 ‘Mini’
sputter coater/glow discharge system (Quorum Technologies Ltd,
Laughton, UK) (Michalak et al., 2014) [25].
3.12. Statistical Analysis
The data was analyzed by calculating Means ± SE, Analysis of
Variance (ANOVA), Regression, co-relation and Z-test was per-
formed by using Minitab software. P value was calculated to see
the significance. The results of heavy metal analysis through AAS
and physico-chemical analysis of collected effluent samples are
shown in (Tables 1 & 2) respectively. From all 30 samples 13 sam-
ples were identified possessing Ni tolerant isolates in them but
only two samples collected from drains surrounding the textile
units located at small industrial estate and main Sargodha Road,
Faisalabad Pakistan (SarDP1, SarDP5) shown the presence of iso-
lates which shown MTC of Ni up to 08mM were selected for fur-
ther studies. Single colonies of bacteria were obtained by repeated
streaking and strains were given names (AMIC2 & AMIC3).
4. Results
It is worthy to elaborate that as all 30 samples were collected from
06 locations and from each location 05 points were selected so
statistically results are tabulated for 06 locations and their mean
and standard error was calculated. The AAS results shown that
for all samples Ni, Co, Cr, Pb and Zn was found in the range of
0.168±0.035 to 0.230±0.019 for all samples, Co, 0.128±0.053 to
0.216±0.008, Cr, 0.031±0.020 to 0.098±0.018, Pb, 0.026±0.023
to 0.240±0.160 and Zn, 0.218±0.068 to 0.336±0.016. Out of 30
samples 13 were found to have Ni tolerant bacteria, two samples
collected from drains surrounding the textile units located at small
industrial estate and main Sargodha Road, Faisalabad Pakistan
(SarDP1, SarDP5) shown the presence of isolates which shown
MTC of Ni up to 08 mM were selected for further studies. Sin-
gle colonies of bacteria were obtained by repeated streaking and
strains were named as AMIC2 and AMIC3 respectively. MTC of
Ni, Co and MMR shown by AMIC2 and AMIC3 is given in Table
1 & 2 respectively. Initial identification of the isolate up to genus
level was done by using conventional microbiological techniques
as described in Bergey’s Manual of Determinative Bacteriology
(Table 3). Molecular characterizations of the isolates were done by
ribotyping for confirmation of bacterial species. Phylogenetic tree
has been shown in (Figure 1). Percentage similarity and GenBank
accession number is given in (Table 4). To observe the effect of Ni
and Co separately on bacterial growth, growth curve experiment
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was conducted in nutrient broth (Figure 2). The biosorption po-
tential of AMIC2 and AMIC3 was determined against Ni and Co.
Percentage reduction in metal (Ni & Co) is given in (Table 5).
Fourier Transform Infrared Spectroscopy (FT-IR) was used to ana-
lyze the functional groups and overall nature of chemical bonds
in the isolates. Results of FT-IR spectra for AMIC2 and AMIC3
are given in (Figures 3 & 4) respectively. SEM was performed to
check any morphological changes occurred in the outer surface of
the bacteria in response to metal (Ni or Co). The results revealed
that both metals (Ni & Co) affected the bacterial cell wall. Surface
changes can be easily observed when compared to control (bacte-
ria grown without metal stress) as shown in (Figure 5).
Figure 1: 16S rRNA sequence-based phylogenetic tree of Bacillus cereus isolated from textile effluent constructed by Maximum Likelihood method
Figure 2: (a) Graph showing effect of Ni, Co and without metal (control) on the growth rate of AMIC2 (Bacillus spp.) (b) Graph showing effect of Ni,
Co and without metal (control) on the growth rate of AMIC3 (Bacillus spp.)
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Figure 3: (a) FT-IR spectra of AMIC2 biomass loaded with Ni (b) FT-IR spectra of AMIC1 biomass loaded with Co (c) FT-IR spectra of AMIC1 bio-
mass without metal loading
Table 1: Maximum Tolerable Concentration of Nickel (Ni & Co) and Multi Metal Resistance (Ni, Co and Cr) shown by AMIC2
MTC of Ni shown by AMIC2
Concentration of Ni (mM)
1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9
+ + + + + + + + + + + + + + + - -
MTC of Co shown by AMIC2
Concentration of Co (mM)
1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9
+ + + + + + + + + + + - - - - - -
MMR shown by AMIC2
Concentration of Ni, Co and Cr (mM) at 1:1:1
1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9
+ + + + + + + + + + - - - - - - -
Table 2: Maximum Tolerable Concentration of Nickel (Ni & Co) and Multi Metal Resistance (Ni, Co and Cr) shown by AMIC3
MTC of Ni shown by AMIC3
Concentration of Ni (mM)
1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9
+ + + + + + + + + + + + + + + - -
MTC of Co shown by AMIC3
Concentration of Co (mM)
1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9
+ + + + + + + + + + + + - - - - -
MMR shown by AMIC3
Concentration of Ni, Co and Cr (mM) at 1:1:1
1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9
+ + + + + + + + - - - - - - - - -
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Figure 4: (a) FT-IR spectra of AMIC2 biomass loaded with Ni (b) FT-IR spectra of AMIC1 biomass loaded with Co (c) FT-IR spectra of AMIC1 bio-
mass without metal loading
Morphological Tests
Test Name
Isolated heavy metal tolerant bacterial strains
AMIC2 AMIC3
Cell Morphology Rod Rod
Gram’s reaction +ve +ve
Motility +ve +ve
Flagella +ve +ve
Colonies characteristics on selective and differential
media
Nutrient agar
White to cream colour
colonies
White to cream colour
colonies
Biochemical tests
Catalase + +
Oxidase - -
Indole - -
VP + +
MR - -
Citrate Utilization + +
Carbohydrate fermentation tests
Arabinose - -
Glucose + +
Inositol - -
Lactose - -
Maltose + +
Mannitol - -
Mannose - -
Sucrose + +
Starch + +
Table 3: Morphological and biochemical characteristics of isolated heavy metal tolerant bacterial strains
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Table 4: Percentage of maximum similarity and GenBank accession number of HMT bacteria
Sr. No Strain name Identified as Total bases Homology Accession No.
1 AMIC2 Bacillus sp. 1433 Bacillus cereus ATCC 14579(Type strain); (AE016877) ;99.86% LT838345
2 AMIC3 Bacillus sp. 1445 Bacillus cereus ATCC 14579(Type strain); (AE016877); 99.79% LT838346
Table 5: Comparison of %age reduction in Nickel (Ni) and Cobalt (Co) by AMIC2 and AMIC3
Bacterial strain Metal 24 hours (S1) 48 hours (S2) Z- value
Initial Final % age Initial Final % age S1 vs. S2
AMIC2 (B. cerus)
Ni 50 25. 8 48.4 50 25.5 49 0.20NS
CO 50 14.7 70.6 50 13.2 73.6 0.45NS
Z-value Ni vs. CO 2.29* 2.77**
AMIC3 (B. cerus)
Ni 50 24.7 50.6 50 24.1 51.8 0.20NS
CO 50 14.1 71.8 50 13.4 73.2 0.23NS
Z- value Ni vs. CO 2.31* 2.34*
Figure 5: (a) SEM of Gram +ve Bacteria (AMIC2) grown without metal stress (control) (b) AMIC2 grown with Ni stress (c) AMIC2 grown with Co
stress
5. Discussion
Heavy metal tolerant bacteria are assumed to occur; mainly in met-
al-contaminated sites. Studies showed that presence of metals and
other physicochemical parameters play an important role in devel-
oping metal tolerance in indigenous bacteria of specific site (Shi
et al., 2013) [39]. pH of specific metal contaminated site controls
the solubility of metals (Klimek et al., 2012) [22]. The pH values
of the effluent samples revealed no significant differences at all
localities and ranged from 7.73±0.22 to 8.28±0.33. BOD and COD
tests are performed to quantify the relative oxygen reduction ef-
fect of waste contaminant (Samudro and Mangkoedihardjo, 2010)
[36]. Results showed that the studied effluent samples belonged to
highly contaminant wastewaters. So it could be assumed that ex-
isting bacteria in a metal stressed environment can develop metal
tolerance (Margesin and Schinner, 2001) [24].
After initial screening, it was observed that 13 out of total 30 ef-
fluent samples exhibited bacterial growth on Nutrient agar incor-
porated with 0.5mM of Ni. After determination of their MTC, it
was observed that 02 samples i.e., SarDP2 and SarDP5 found have
some novel bacterial strains which were able to grow on Nutrient
agar incorporated with 08mM of Ni. Statistical analyses revealed
a highly negative correlation coefficient (r) between the number of
isolates and Ni ion concentration for these samples; SarDP2 (r=-
0.916x) & SarDP5 (r=-4.90x).
These two samples were then screened for tolerance to Co & Cr
and multi metal resistance (MMR) against Ni, Co and Cr. It was
evident from the results that bacteria from sample SarDP2 were
able to tolerate Co up to 06mM & Cr up to 7.5mM separately and
also exhibited MMR to Ni, Co and Cr (1:1:1) up to 5.5mM. Sim-
ilarly, isolate from SarDP5 was able to tolerate Co up to 6.5mM,
Cr up to 07mM and exhibited MMR to Ni, Co and Cr (1:1:1) up
to 4.5mM.
These two bacterial strains which were able to tolerate the maxi-
mum concentration of heavy metals isolated from effluent samples
SarDP2 and SarDP5 were named as AMIC2 and AMIC3 respec-
tively. After Gram’s staining of these strains, it was observed that
both bacterial strains were Gram +ve rods. After examination of
colony characteristics on selective & differential media, biochem-
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ical and sugar fermentation tests results, it was confirmed that
bacterial strains AMIC2 and AMIC3 isolated from SarDP2 and
SarDP5 were Bacillus spp.
The results of present study are in agreement with the work of
Abd El Hameed et al. (2015) [2] who performed the similar work
by isolating the fungi from phosphatic sources and found a nega-
tive correlation between isolates and metal concentrations. Similar
study was performed by Selvi et al [37]. (2012) for the isolation
and characterization of heavy metal tolerant bacteria from tannery
effluents and found that all isolates (Escherichia coli, Bacillus spp.,
Pseudomonas spp., Flavobacterium spp. and Alcaligenes spp.)
exhibited tolerance to heavy metals in the respective order; Pb>
Cu> Zn> Cr> Hg. Similarly, Raja et al. (2006) [31] performed a
study for the isolation and characterization of metal tolerant Pseu-
domonas aeruginosa strain and found that isolate showed biosorp-
tion potential against all four tested metals (Cd, Cr, Pb and Ni) and
the biosorption pattern was found as: Cr (30%) < Cd (50%) < Pb
(65%) < Ni (93%).
The results of the present study are also in agreement with the
work of Alboghobeish et al. (2014) [4] who isolated Nickel re-
sistant bacteria (NiRB) from wastewater polluted with different
industrial sources. Similar study was performed by Ahirwar et al.
(2016) [3] for the isolation and characterization of heavy metal
resistant bacteria from industrial affected soil and found that bacte-
rial strains identified as Pseudomonas vulgaris, Pseudomonas flu-
orescence and Bacillus cereus were found to be the most efficient
strains in terms of metal resistance.
After the isolation and identification of bacterial strains, growth
conditions i.e., pH and temperature were optimized for the isolated
and identified heavy metal tolerant bacteria. An optimum growth
condition for each strain was determined without and with metal
stress. It was found that AMIC2 and AMIC3 (Bacillus spp.) in nu-
trient broth with and without metal revealed maximum growth in
terms of highest OD values at pH 08 and temperature 37oC. Statis-
tical analyses revealed that there was highly significant difference
(P<0.01) found in growth pattern of all strains when grown at dif-
ferent temperature and pH and also a highly significant difference
(P<0.01) found in growth pattern of all strains when grown without
and with metal stress. Then the effect of heavy metals (Ni or Co)
was observed on both strains i.e., AMIC2 and AMIC3 (Bacillus
spp.). Bacteria were grown without and with metal (Ni or Co) and
the growth curve patterns were studied. It was evident from the
results that metal ions (Ni or Co) significantly (P<0.05) reduced
the rate of growth of both bacterial strains as compared to control
group. Similar study was performed by Shakoori et al. (2010) [38]
for the isolation and characterization of Cr6+ reducing bacteria.
Who found that B. pumilus and Staphylococcus sp. showed op-
timum growth at temperature 37oC and pH 8 whereas A. faecalis
exhibited optimum growth at temperature 37oC and pH 7.
After the molecular characterization of the isolated strains, bio-
sorption potential of both bacterial strains i.e. AMIC2 and AMIC3
(B. cerus) was determined against two metals i.e. Nickel (Ni) and
Cobalt (Co) through Inductively Coupled Plasma-Optical Emis-
sion Spectroscopy (ICP-OES). %age reduction in metal concen-
trations after 24 and 48hours were determined. The results showed
that AMIC2 (B. cerus) reduced Nickel (Ni) 48.4 and 49% whereas
reduction of Cobalt (Co) was 70.6 and 73.6% after 24 and 48hours.
Similarly, AMIC3 (B. cerus) reduced Nickel (Ni) 50.6 and 51.8%
whereas reduction of Cobalt (Co) was 71.8% and 73.2% after 24
and 48hours respectively. For statistical analysis Z-test was per-
formed to compare the biosorption potential of each bacterial strain
at two different incubation times and to compare the biosorption
capacity of each bacterial strain for both metals i.e., Ni and Co
at each incubation time. Results of statistical analyses shown that
there was no significant difference (P>0.05) in the metal absorp-
tion capacity of all the bacterial strains when incubated for 24
hours and 48 hours but there was a significant difference (P<0.05)
for biosorption capacity of each bacterial strain for both metals.
Results shown that there was a significant difference (P<0.05) in
the reduction of Ni and Co for all the strains. It was evident from
the results of biosorption experiment that reduction pattern for Ni
was found as AMIC3>AMIC2 and pattern for Co was found as
AMIC2>AMIC3.
The results of present study are in agreement with the work of Das
et al. 2016 [13] who found that Enterobacter sp. and Klebsiella sp.
isolated from industrial effluents significantly (P<0.05) reduced
Pb. Similar results were reported by Abbas et al. (2014) [1] who
found that Pseudomonas sp. M3 isolated from wastewater sam-
ples were able to reduce 70% Cd from medium. In another study
Abbas et al. (2014) [1] found that Enterobacter sp. and K. pneu-
monia sp. isolated from industrial effluents significantly (P<0.05)
reduced Ar. Similar results were documented by Alboghobeish et
al. (2014) [4] who found that K. oxytoca decreased 83mg/l of Ni+2
from the medium after 72 hours. Similarly, Gawali et al. (2014)
[14] evaluated the bioremediation potential of heavy metal tolerant
bacteria isolated from industrial wastewater. They found that E.
coli was able to remove Pb and Cu with removal %age of 45% and
62% respectively. P. aeruginosa was able to remove Cd, Ni and Co
with removal %age of 56%, 34% and 53% respectively. While E.
acrogens was able remove Cd and Cu with removal %age of 44%
and 34% respectively.
FT-IR study was carried out to confirm the difference between
functional groups in relation to biosorption of metal (Ni and Co)
using metal-loaded (Ni or Co) biomass in comparison to control
(bacteria grown in normal conditions). The control sample demon-
strated the presence of a number of absorption peaks and reflected
the complex nature of the biomass. A change of absorption bands
was observed, when we compared the FT-IR spectra of control and
metal loaded biomass. After the evaluation of AMIC2 (B. cerus)
United Prime Publications LLC., https://acmcasereport.org/ 9
Volume 12 Issue 5 -2023 Research Article
spectra it was observed that there was a change in peak at 3500–
3200 cm-1 regions in spectrum of Ni and Co and was considered
as the binding of Ni and Co with amino and hydroxyl group. Sim-
ilarly, a change in peak at 2900-3000 cm−1 regions in spectrum of
Ni and Co was considered as the binding of Ni and Co with –CH2
groups combined with that of the CH3 groups. A similar change
in peak at 1300–1067 cm−1 regions considered as the binding of
Ni and Co with carboxyl and phosphate groups. Similarly, the
evaluation of AMIC3 (B. cerus) spectra it revealed that there was
a change in peak at 3500–3200 cm-1 regions in spectrum of Ni
and Co and that was considered as the binding of Ni and Co with
amino and hydroxyl group. While a change in peak at 2900-3000
cm−1 regions in spectrum of Ni and Co was considered as the
binding of Ni and Co with –CH2 groups combined with that of
the CH3 groups. A similar change in peak at 1300–1067 cm−1
regions considered as the binding of Ni and Co with carboxyl and
phosphate groups.
The results of the present study are in agreement with Park et al.
2005 who performed a similar study and described that a peak at
3500–3200 cm-1 region is due to the stretching of the N–H bond
of amino groups and indicates bonded hydroxyl group. Similar-
ly, Kazy et al. (2006) [21] described that the absorption peaks at
2900–3000 cm−1 are attributed to the asymmetric stretching of
C–H bond of the –CH2 groups combined with that of the CH3
groups. Pistorius, 1995 [29] described that the peaks in the range
1300–1067 cm−1 are attributable to the presence of carboxyl and
phosphate groups. Pradhan et al., 2007; [28] Volesky, 2007 [48]
insisted that mainly functional groups including (hydroxyl, car-
bonyl, carboxyl, sulfonate, amide, imidazole, phosphonate and
phosphodiester) are responsible for the biosorption of metals.
Quintelas et al. 2009 [30] performed a similar study and observed
that functional groups on the biomass, such as hydroxyl, carbox-
yl and phosphate groups, would be the main binding sites for bi-
osorption of the studied heavy metals by E. coli. Similar results
were documented by Kang et al. (2006) who compared the FT-IR
spectra of pristine and chromium loaded biomass and found that
P. aeruginosa before and after metal binding indicated that –NH is
involved in Cr (VI) biosorption.
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In-Vitro Evaluation of Heavy Metal Tolerance and Biosorptive Potential of Two Native Strains of Bacillus Cereus Against Nickel and Cobalt

  • 1. Annals of Clinical and Medical Case Reports Research Article ISSN 2639-8109 Volume 12 Afzal AM* Department of Microbiology, Government College University, Faisalabad, 38000 Pakistan In-Vitro Evaluation of Heavy Metal Tolerance and Biosorptive Potential of Two Native Strains of Bacillus Cereus Against Nickel and Cobalt * Corresponding author: Abuzar Muhammmad Afzal, Department of Microbiology, Government College University, Faisalabad, 38000 Pakistan Received: 10 Nov 2023 Accepted: 15 Dec 2023 Published: 26 Dec 2023 J Short Name: ACMCR Copyright: ©2023 Afzal AM. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, dis- tribution, and build upon your work non-commercially Citation: Afzal AM, In-Vitro Evaluation of Heavy Metal Toler- ance and Biosorptive Potential of Two Native Strains of Bacillus Cereus Against Nickel and Cobalt. Ann Clin Med Case Rep. 2023; V12(5): 1-11 United Prime Publications LLC., https://acmcasereport.org/ 1 Keywords: Heavy metal contamination; Textile effluent; Bacillus cerus; Bioremediation 1. Abstract Heavy metal contamination now a day is one of the major global environmental concerns and industrial effluent is commonly used for irrigation. Increasing industrial rate in the modern world is re- sponsible for increase in concentration of heavy metals. Present study was designed to isolate and identify some indigenous heavy metal tolerant bacteria from textile effluents. Two isolates were screened out showing maximum tolerable concentration and mul- ti metal resistance to Ni and Co and were named as AMIC2 and AMIC3. Molecular characterization confirmed AMIC2 as (Bacil- lus cerus, accession number LT838345) and AMIC3 as (B. cerus, accession number LT838346). Biosorptive potential was accessed using Inductively Coupled Plasma-Optical Emission Spectroscopy and it was found that AMIC2 reduced Ni (48.4%, 49%) and Co (70.6%, 73.6%) after 24 and 48 hours respectively while AMIC3 reduced Ni (50.6%, 51.8%) and Co (71.8%, 73.2%) after 24 and 48 hours respectively. Fourier transform infrared spectroscopy was used to analyze the functional groups and overall nature of chem- ical bonds in isolates while Scanning Electron Microscope was performed to detect outer morphological changes in the bacteria in response to metal stress. Overall results suggested that bacteria possessed significant bioremediation potential and could be used in the development of bioremediation agents. 2. Introduction In general, “Heavy Metal” is a broad term, which is used for the group of metals and metalloids having atomic density greater than 4000 kg m-3 or 5 times more than water. Heavy metal contamina- tion now a day is one of the major global environmental concerns and the main sources of heavy metal contamination are either natu- ral or anthropogenic. Depending on soil pH and their specification these heavy metals can become mobile in soils and in this way, a small part of the total mass can leach to aquifer or can become bioavailable to living organisms (Hookoom, 2013) [17]. Industrial wastewater is commonly used for irrigation in most of the develop- ing third world countries (Bouwer et al., 2002) [9]. Without proper treatment, release of heavy metals in effluent poses a menace to public health because of its persistence, biomagnifications and ac- cumulation in food chain (Issazadeh, 2014) [18]. As the number of industries is being increased day by day in the modern world, with this the concentration of heavy metals is also being increased. Cadmium, chromium, mercury, lead, nickel, cobalt and copper are mainly found in the industrial wastewater (Smrithi, 2012) [42]. Several studies have been conducted to elaborate the effects of these heavy metals on living organisms including animals, plants and human (Chisti, 2004) [11]. In recent years, the use of microbes for removal of heavy metals has achieved great attention. Vari- ous microorganisms such as bacteria (Shuttlework et al., 1993) [40], yeast (Salinas et al., 2000) [34], fungi (Anoop et al. 1999) [5], algae (Ahuja et al., 1999) [5], and plants (Chen et al., 1996) [10] have been reported to tolerate and remove heavy metals from aqueous solutions. Bioremediation is a potential cost-effective solution for the remediation of heavy metal contaminated envi-
  • 2. United Prime Publications LLC., https://acmcasereport.org/ 2 Volume 12 Issue 5 -2023 Research Article ronment (Congeevaram et al., 2007) [12]. The advantages of using microbes for bio-remediation include natural occurrence, cheap production, easy availability to treat large volumes of wastewater due to rapid kinetics and high selectivity in terms of removal and recovery of specific metals (Genter, 1996) [15]. Indigenous organ- isms have the ability to adopt themselves according to the prevail- ing environments and could flourish under these conditions (Haq, 2000) [16]. Variety of mechanisms has been developed by some microorganisms to deal with high concentrations of heavy metals and usually is specific to one or a few metals (Piddock, 2006). Most microorganisms, posses the efflux of metal ions outside the cell, and genes for tolerance mechanisms has been found on both chromosomes and plasmids (Hookoom, 2013) [17]. Some bacte- ria can use mechanisms of tolerance and detoxification of heavy metals and still produce chelating agents that bound metals and reduce their toxicity (Kavamura and Esposito, 2010) [20]. Many living bacteria have been reported to reduce or to transform toxic contaminants into their less toxic forms (Solecka et al., 2012) [43]. Faisalabad is the 3rd biggest city in Pakistan after Karachi and Lahore. It is the 2nd biggest city in the province of Punjab after Lahore, and a major industrial center. The city is also known as the “Manchester of Pakistan” (Jaffrelot, 2002). The surrounding countryside, irrigated by the lower Chenab River, produces cotton, wheat, sugarcane, vegetables and fruits. Due to the heavy industri- alization different types of waste is being produced by the different industries. The textile zone is playing a vital role in the export of the country but at the same time a lot of environmental pollu- tion is being produced by this zone. It is one of the main polluters in industrial sectors in the compass of degree and the chemical composition of the discharged runoff. Inept dyeing processes of- ten result in considerable residuals of dyes. The presence of these dyes in effluent is considered to be very problematic because of the persistent and recalcitrant nature (Yasar et al., 2013) [50]. There- fore, it is need of the time to analyze these wastes for the isolation and characterization of some indigenous strains of heavy metal tolerant (HMT) bacteria and to explore their potential in bioreme- diation of common heavy metals founds in such effluents. Keeping in view the above, present study was conducted for the isolation, identification and molecular characterization of indigenous HMT bacterial strains from textile effluent and to evaluate their biosorp- tive potential against heavy metals. 3. Meterials & Methods 3.1. Sample Collection & Heavy Metals Analysis Wastewater samples were collected from the textile effluent. 06 main drains present in and around Faisalabad, Pakistan receiving the textile effluents and surrounding different textile units were se- lected. From each drain, 05 samples were taken keeping the dis- tance of about 1000 meter between two points (Baby et al., 2014) [7]. After collection, samples were processed for determination of heavy metals i.e., Cobalt (Co), Chromium (Cr), Nickel (Ni), Lead (Pb) and Zinc (Zn). Samples were digested by following the pro- tocol as previously described by Sinha et al. (2014) [41] and metal analysis was done by using Atomic Absorption Spectrophotometer (AAS) (Hitachi Polarized Zeeman AAS, Z-8200, Japan) following the conditions described in AOAC (1990) [6]. Based on the results of metal analysis, Nickel (Ni) and Cobalt (Co) were selected for further study. 3.2. Isolation of Hmt Bacteria Tenfold serial dilutions of effluents were prepared in sterile dis- tilled water up to 10-5 as described by Lucious et al. (2013) [23]. Isolation of Ni and Co tolerant bacteria was done through spread plate method as described by Samanta et al. (2012) [35]. 3.3. Determination of Maximum Tolerable Concentration (MTC) MTC of heavy metal was selected as its highest concentration that allowed visible bacterial growth after 48 to 96 hours of incubation. The increasing concentration of both heavy metals (Ni and Co) i.e. (0.5 mM, 1 mM, 1.5 mM, 02 mM, 2.5 mM, 03 mM, 3.5 mM, 04 mM, 4.5 mM, 05 mM, 5.5 mM, 06 mM, 6.5 mM, 07 mM, 7.5 mM, 08 mM, 8.5 mM, 09 mM, 9.5 mM, and 10 mM) were added in pre-sterilized nutrient agar plates for testing the MTCs of bacteria (Vashishth and Khanna, 2015) [46]. 3.4. Multi Metal Resistance (MMR) MMR of bacteria was determined by inoculating them on nutrient agar medium incorporated with Ni, Co and Cr in equal concentra- tion i.e. (1:1:1) as described by Saini and Pant (2016) [33]. 3.5. Identification of Bacteria After 48 hours of incubation, colonies were selected on the basis of morphology, shape and color. All the isolates were purified by repeated streaking on nutrient agar and stored at 4°C for further studies. Identification up to genus level was done on the basis of cultural characteristics, microscopic examination after Gram’s staining (shape, arrangement and staining character), and physio- logical/biochemical characteristics (motility, oxidase reaction, cat- alase reaction, glucose utilization & fermentation tests and starch hydrolysis). All identification tests were performed following the protocols mentioned in Bergey’s Manual of Determinative Bacte- riology. 3.6. Molecular Characterization Ribotyping was done for the molecular characterization of identi- fied HMT bacteria by amplifying 16S rRNA gene. Total genomic DNA was extracted by CTAB method (Wilson, 2001) [49]. Poly- merase Chain Reaction (PCR) was used for the amplification of 16S rRNA using 16S rRNA PCR primers, PA (5 ́-AGAGTTT- GATCCTGGCTCAG-3 ́, and PH (5 ́-AAGGAGGTGATCCAGC- CGCA-3 ́) (Zaheer et al. 2016) [51].
  • 3. United Prime Publications LLC., https://acmcasereport.org/ 3 Volume 12 Issue 5 -2023 Research Article 3.7. Phylogenetic Analysis The 16S rRNA gene from the pure culture sequences from the NCBI database were aligned using Clustal X (Thompson et al., 1997) [45] and the maximum likelihood (ML)-based phylogenet- ic tree was constructed using MEGA (version 6) (Tamura et al. 2013) [44]. Confidence in the tree topology was evaluated using bootstrap resampling methods (1000 replications), and bootstrap values of at least 50% that demonstrated good support measures were retained. 3.8. Effect of Ni and Co on Bacterial Growth To observe the effect of Ni and Co separately on bacterial growth, growth curve experiment was conducted in nutrient broth. For this purpose, nutrient broth tubes with Ni (01mM), Co (01mM) and without Ni and Co (control) were prepared. For each bacterial iso- late 100 ml medium was taken in one set consisting of 08 test tubes for all three groups (i.e., two with metals and one control), autoclaved and then inoculated with 20 μL of freshly prepared in- oculum. These tubes were incubated in shaking incubator at 37ºC at 100 rpm. Then after 0, 4, 8, 12, 16, 20, 24 and 28 hours one tube out of 08 in each group was removed and absorbance was meas- ured at 600 nm. Growth curve was plotted by the readings obtained from the experiment and compared (Shakoori et al., 2010) [38]. 3.9. Evaluation of Biosorption Potential Biosorption potential of indigenously isolated and characterized bacterial strains named as AMIC2 and AMIC3 was determined against two metals i.e., Ni and Co. For this purpose, one set (each containing 02 glass culture bottles) having capacity of 500ml was prepared for each strain supplemented with 200 ml of LB broth with initial metal concentration of 50ppm for both metals. After autoclaving each set was inoculated with 02 ml of 18-hour old bacterial culture having turbidity equal to 0.5McFarland turbid- ity solution. Culture bottles were kept under constant agitation at 37oC for 24 and 48 hours then centrifuged at 14000 rpm for 05 minutes and supernatants were collected and stored at -20oC for heavy metal analyses. Heavy metals present in solution were measured through Inductively Coupled Plasma-Optical Emission Spectroscopy (ICP-OES) (Ramyakrishna and Sudhamani, 2016) [32]. 3.10. FT-IR Analysis of Bacterial Biomass FT-IR was used to analyze the functional groups and overall na- ture of chemical bonds in bacterial strains. Infrared spectra of the control (bacteria grown without metal stress) and tested (bacte- ria grown with metal stress, Ni or Co) biomass were obtained by grinding 02mg of freeze-dried biomass with 200mg dry potassi- um bromide (KBr) powder (1:100) ratio in agate mortar. Obtained mixture was pressed to get translucent sample discs using pressure bench press. The FT-IR analysis was performed by using Perkin- Elmer Spectrum Version 10.4.3. The spectral data were collected over the range of 450- 4000 cm-1 (Ramyakrishna and Sudhamani, 2016) [32]. 3.11. Scanning Electron Microscopy (SEM) Outer morphology of the bacterial cells before and after biosorp- tion was examined using SEM (Carl Zeiss Supra 55 Gemin; Ger- man Technology, Jena, Germany). Prepared samples were placed on the sample holder (stub) with carbon tape. In order to increase the electron conduction and to improve the quality of micrographs, a conductive layer of gold was made with portable SC7620 ‘Mini’ sputter coater/glow discharge system (Quorum Technologies Ltd, Laughton, UK) (Michalak et al., 2014) [25]. 3.12. Statistical Analysis The data was analyzed by calculating Means ± SE, Analysis of Variance (ANOVA), Regression, co-relation and Z-test was per- formed by using Minitab software. P value was calculated to see the significance. The results of heavy metal analysis through AAS and physico-chemical analysis of collected effluent samples are shown in (Tables 1 & 2) respectively. From all 30 samples 13 sam- ples were identified possessing Ni tolerant isolates in them but only two samples collected from drains surrounding the textile units located at small industrial estate and main Sargodha Road, Faisalabad Pakistan (SarDP1, SarDP5) shown the presence of iso- lates which shown MTC of Ni up to 08mM were selected for fur- ther studies. Single colonies of bacteria were obtained by repeated streaking and strains were given names (AMIC2 & AMIC3). 4. Results It is worthy to elaborate that as all 30 samples were collected from 06 locations and from each location 05 points were selected so statistically results are tabulated for 06 locations and their mean and standard error was calculated. The AAS results shown that for all samples Ni, Co, Cr, Pb and Zn was found in the range of 0.168±0.035 to 0.230±0.019 for all samples, Co, 0.128±0.053 to 0.216±0.008, Cr, 0.031±0.020 to 0.098±0.018, Pb, 0.026±0.023 to 0.240±0.160 and Zn, 0.218±0.068 to 0.336±0.016. Out of 30 samples 13 were found to have Ni tolerant bacteria, two samples collected from drains surrounding the textile units located at small industrial estate and main Sargodha Road, Faisalabad Pakistan (SarDP1, SarDP5) shown the presence of isolates which shown MTC of Ni up to 08 mM were selected for further studies. Sin- gle colonies of bacteria were obtained by repeated streaking and strains were named as AMIC2 and AMIC3 respectively. MTC of Ni, Co and MMR shown by AMIC2 and AMIC3 is given in Table 1 & 2 respectively. Initial identification of the isolate up to genus level was done by using conventional microbiological techniques as described in Bergey’s Manual of Determinative Bacteriology (Table 3). Molecular characterizations of the isolates were done by ribotyping for confirmation of bacterial species. Phylogenetic tree has been shown in (Figure 1). Percentage similarity and GenBank accession number is given in (Table 4). To observe the effect of Ni and Co separately on bacterial growth, growth curve experiment
  • 4. United Prime Publications LLC., https://acmcasereport.org/ 4 Volume 12 Issue 5 -2023 Research Article was conducted in nutrient broth (Figure 2). The biosorption po- tential of AMIC2 and AMIC3 was determined against Ni and Co. Percentage reduction in metal (Ni & Co) is given in (Table 5). Fourier Transform Infrared Spectroscopy (FT-IR) was used to ana- lyze the functional groups and overall nature of chemical bonds in the isolates. Results of FT-IR spectra for AMIC2 and AMIC3 are given in (Figures 3 & 4) respectively. SEM was performed to check any morphological changes occurred in the outer surface of the bacteria in response to metal (Ni or Co). The results revealed that both metals (Ni & Co) affected the bacterial cell wall. Surface changes can be easily observed when compared to control (bacte- ria grown without metal stress) as shown in (Figure 5). Figure 1: 16S rRNA sequence-based phylogenetic tree of Bacillus cereus isolated from textile effluent constructed by Maximum Likelihood method Figure 2: (a) Graph showing effect of Ni, Co and without metal (control) on the growth rate of AMIC2 (Bacillus spp.) (b) Graph showing effect of Ni, Co and without metal (control) on the growth rate of AMIC3 (Bacillus spp.)
  • 5. United Prime Publications LLC., https://acmcasereport.org/ 5 Volume 12 Issue 5 -2023 Research Article Figure 3: (a) FT-IR spectra of AMIC2 biomass loaded with Ni (b) FT-IR spectra of AMIC1 biomass loaded with Co (c) FT-IR spectra of AMIC1 bio- mass without metal loading Table 1: Maximum Tolerable Concentration of Nickel (Ni & Co) and Multi Metal Resistance (Ni, Co and Cr) shown by AMIC2 MTC of Ni shown by AMIC2 Concentration of Ni (mM) 1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9 + + + + + + + + + + + + + + + - - MTC of Co shown by AMIC2 Concentration of Co (mM) 1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9 + + + + + + + + + + + - - - - - - MMR shown by AMIC2 Concentration of Ni, Co and Cr (mM) at 1:1:1 1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9 + + + + + + + + + + - - - - - - - Table 2: Maximum Tolerable Concentration of Nickel (Ni & Co) and Multi Metal Resistance (Ni, Co and Cr) shown by AMIC3 MTC of Ni shown by AMIC3 Concentration of Ni (mM) 1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9 + + + + + + + + + + + + + + + - - MTC of Co shown by AMIC3 Concentration of Co (mM) 1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9 + + + + + + + + + + + + - - - - - MMR shown by AMIC3 Concentration of Ni, Co and Cr (mM) at 1:1:1 1 1.5 2 2.5 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8 8.5 9 + + + + + + + + - - - - - - - - -
  • 6. United Prime Publications LLC., https://acmcasereport.org/ 6 Volume 12 Issue 5 -2023 Research Article Figure 4: (a) FT-IR spectra of AMIC2 biomass loaded with Ni (b) FT-IR spectra of AMIC1 biomass loaded with Co (c) FT-IR spectra of AMIC1 bio- mass without metal loading Morphological Tests Test Name Isolated heavy metal tolerant bacterial strains AMIC2 AMIC3 Cell Morphology Rod Rod Gram’s reaction +ve +ve Motility +ve +ve Flagella +ve +ve Colonies characteristics on selective and differential media Nutrient agar White to cream colour colonies White to cream colour colonies Biochemical tests Catalase + + Oxidase - - Indole - - VP + + MR - - Citrate Utilization + + Carbohydrate fermentation tests Arabinose - - Glucose + + Inositol - - Lactose - - Maltose + + Mannitol - - Mannose - - Sucrose + + Starch + + Table 3: Morphological and biochemical characteristics of isolated heavy metal tolerant bacterial strains
  • 7. United Prime Publications LLC., https://acmcasereport.org/ 7 Volume 12 Issue 5 -2023 Research Article Table 4: Percentage of maximum similarity and GenBank accession number of HMT bacteria Sr. No Strain name Identified as Total bases Homology Accession No. 1 AMIC2 Bacillus sp. 1433 Bacillus cereus ATCC 14579(Type strain); (AE016877) ;99.86% LT838345 2 AMIC3 Bacillus sp. 1445 Bacillus cereus ATCC 14579(Type strain); (AE016877); 99.79% LT838346 Table 5: Comparison of %age reduction in Nickel (Ni) and Cobalt (Co) by AMIC2 and AMIC3 Bacterial strain Metal 24 hours (S1) 48 hours (S2) Z- value Initial Final % age Initial Final % age S1 vs. S2 AMIC2 (B. cerus) Ni 50 25. 8 48.4 50 25.5 49 0.20NS CO 50 14.7 70.6 50 13.2 73.6 0.45NS Z-value Ni vs. CO 2.29* 2.77** AMIC3 (B. cerus) Ni 50 24.7 50.6 50 24.1 51.8 0.20NS CO 50 14.1 71.8 50 13.4 73.2 0.23NS Z- value Ni vs. CO 2.31* 2.34* Figure 5: (a) SEM of Gram +ve Bacteria (AMIC2) grown without metal stress (control) (b) AMIC2 grown with Ni stress (c) AMIC2 grown with Co stress 5. Discussion Heavy metal tolerant bacteria are assumed to occur; mainly in met- al-contaminated sites. Studies showed that presence of metals and other physicochemical parameters play an important role in devel- oping metal tolerance in indigenous bacteria of specific site (Shi et al., 2013) [39]. pH of specific metal contaminated site controls the solubility of metals (Klimek et al., 2012) [22]. The pH values of the effluent samples revealed no significant differences at all localities and ranged from 7.73±0.22 to 8.28±0.33. BOD and COD tests are performed to quantify the relative oxygen reduction ef- fect of waste contaminant (Samudro and Mangkoedihardjo, 2010) [36]. Results showed that the studied effluent samples belonged to highly contaminant wastewaters. So it could be assumed that ex- isting bacteria in a metal stressed environment can develop metal tolerance (Margesin and Schinner, 2001) [24]. After initial screening, it was observed that 13 out of total 30 ef- fluent samples exhibited bacterial growth on Nutrient agar incor- porated with 0.5mM of Ni. After determination of their MTC, it was observed that 02 samples i.e., SarDP2 and SarDP5 found have some novel bacterial strains which were able to grow on Nutrient agar incorporated with 08mM of Ni. Statistical analyses revealed a highly negative correlation coefficient (r) between the number of isolates and Ni ion concentration for these samples; SarDP2 (r=- 0.916x) & SarDP5 (r=-4.90x). These two samples were then screened for tolerance to Co & Cr and multi metal resistance (MMR) against Ni, Co and Cr. It was evident from the results that bacteria from sample SarDP2 were able to tolerate Co up to 06mM & Cr up to 7.5mM separately and also exhibited MMR to Ni, Co and Cr (1:1:1) up to 5.5mM. Sim- ilarly, isolate from SarDP5 was able to tolerate Co up to 6.5mM, Cr up to 07mM and exhibited MMR to Ni, Co and Cr (1:1:1) up to 4.5mM. These two bacterial strains which were able to tolerate the maxi- mum concentration of heavy metals isolated from effluent samples SarDP2 and SarDP5 were named as AMIC2 and AMIC3 respec- tively. After Gram’s staining of these strains, it was observed that both bacterial strains were Gram +ve rods. After examination of colony characteristics on selective & differential media, biochem-
  • 8. United Prime Publications LLC., https://acmcasereport.org/ 8 Volume 12 Issue 5 -2023 Research Article ical and sugar fermentation tests results, it was confirmed that bacterial strains AMIC2 and AMIC3 isolated from SarDP2 and SarDP5 were Bacillus spp. The results of present study are in agreement with the work of Abd El Hameed et al. (2015) [2] who performed the similar work by isolating the fungi from phosphatic sources and found a nega- tive correlation between isolates and metal concentrations. Similar study was performed by Selvi et al [37]. (2012) for the isolation and characterization of heavy metal tolerant bacteria from tannery effluents and found that all isolates (Escherichia coli, Bacillus spp., Pseudomonas spp., Flavobacterium spp. and Alcaligenes spp.) exhibited tolerance to heavy metals in the respective order; Pb> Cu> Zn> Cr> Hg. Similarly, Raja et al. (2006) [31] performed a study for the isolation and characterization of metal tolerant Pseu- domonas aeruginosa strain and found that isolate showed biosorp- tion potential against all four tested metals (Cd, Cr, Pb and Ni) and the biosorption pattern was found as: Cr (30%) < Cd (50%) < Pb (65%) < Ni (93%). The results of the present study are also in agreement with the work of Alboghobeish et al. (2014) [4] who isolated Nickel re- sistant bacteria (NiRB) from wastewater polluted with different industrial sources. Similar study was performed by Ahirwar et al. (2016) [3] for the isolation and characterization of heavy metal resistant bacteria from industrial affected soil and found that bacte- rial strains identified as Pseudomonas vulgaris, Pseudomonas flu- orescence and Bacillus cereus were found to be the most efficient strains in terms of metal resistance. After the isolation and identification of bacterial strains, growth conditions i.e., pH and temperature were optimized for the isolated and identified heavy metal tolerant bacteria. An optimum growth condition for each strain was determined without and with metal stress. It was found that AMIC2 and AMIC3 (Bacillus spp.) in nu- trient broth with and without metal revealed maximum growth in terms of highest OD values at pH 08 and temperature 37oC. Statis- tical analyses revealed that there was highly significant difference (P<0.01) found in growth pattern of all strains when grown at dif- ferent temperature and pH and also a highly significant difference (P<0.01) found in growth pattern of all strains when grown without and with metal stress. Then the effect of heavy metals (Ni or Co) was observed on both strains i.e., AMIC2 and AMIC3 (Bacillus spp.). Bacteria were grown without and with metal (Ni or Co) and the growth curve patterns were studied. It was evident from the results that metal ions (Ni or Co) significantly (P<0.05) reduced the rate of growth of both bacterial strains as compared to control group. Similar study was performed by Shakoori et al. (2010) [38] for the isolation and characterization of Cr6+ reducing bacteria. Who found that B. pumilus and Staphylococcus sp. showed op- timum growth at temperature 37oC and pH 8 whereas A. faecalis exhibited optimum growth at temperature 37oC and pH 7. After the molecular characterization of the isolated strains, bio- sorption potential of both bacterial strains i.e. AMIC2 and AMIC3 (B. cerus) was determined against two metals i.e. Nickel (Ni) and Cobalt (Co) through Inductively Coupled Plasma-Optical Emis- sion Spectroscopy (ICP-OES). %age reduction in metal concen- trations after 24 and 48hours were determined. The results showed that AMIC2 (B. cerus) reduced Nickel (Ni) 48.4 and 49% whereas reduction of Cobalt (Co) was 70.6 and 73.6% after 24 and 48hours. Similarly, AMIC3 (B. cerus) reduced Nickel (Ni) 50.6 and 51.8% whereas reduction of Cobalt (Co) was 71.8% and 73.2% after 24 and 48hours respectively. For statistical analysis Z-test was per- formed to compare the biosorption potential of each bacterial strain at two different incubation times and to compare the biosorption capacity of each bacterial strain for both metals i.e., Ni and Co at each incubation time. Results of statistical analyses shown that there was no significant difference (P>0.05) in the metal absorp- tion capacity of all the bacterial strains when incubated for 24 hours and 48 hours but there was a significant difference (P<0.05) for biosorption capacity of each bacterial strain for both metals. Results shown that there was a significant difference (P<0.05) in the reduction of Ni and Co for all the strains. It was evident from the results of biosorption experiment that reduction pattern for Ni was found as AMIC3>AMIC2 and pattern for Co was found as AMIC2>AMIC3. The results of present study are in agreement with the work of Das et al. 2016 [13] who found that Enterobacter sp. and Klebsiella sp. isolated from industrial effluents significantly (P<0.05) reduced Pb. Similar results were reported by Abbas et al. (2014) [1] who found that Pseudomonas sp. M3 isolated from wastewater sam- ples were able to reduce 70% Cd from medium. In another study Abbas et al. (2014) [1] found that Enterobacter sp. and K. pneu- monia sp. isolated from industrial effluents significantly (P<0.05) reduced Ar. Similar results were documented by Alboghobeish et al. (2014) [4] who found that K. oxytoca decreased 83mg/l of Ni+2 from the medium after 72 hours. Similarly, Gawali et al. (2014) [14] evaluated the bioremediation potential of heavy metal tolerant bacteria isolated from industrial wastewater. They found that E. coli was able to remove Pb and Cu with removal %age of 45% and 62% respectively. P. aeruginosa was able to remove Cd, Ni and Co with removal %age of 56%, 34% and 53% respectively. While E. acrogens was able remove Cd and Cu with removal %age of 44% and 34% respectively. FT-IR study was carried out to confirm the difference between functional groups in relation to biosorption of metal (Ni and Co) using metal-loaded (Ni or Co) biomass in comparison to control (bacteria grown in normal conditions). The control sample demon- strated the presence of a number of absorption peaks and reflected the complex nature of the biomass. A change of absorption bands was observed, when we compared the FT-IR spectra of control and metal loaded biomass. After the evaluation of AMIC2 (B. cerus)
  • 9. United Prime Publications LLC., https://acmcasereport.org/ 9 Volume 12 Issue 5 -2023 Research Article spectra it was observed that there was a change in peak at 3500– 3200 cm-1 regions in spectrum of Ni and Co and was considered as the binding of Ni and Co with amino and hydroxyl group. Sim- ilarly, a change in peak at 2900-3000 cm−1 regions in spectrum of Ni and Co was considered as the binding of Ni and Co with –CH2 groups combined with that of the CH3 groups. A similar change in peak at 1300–1067 cm−1 regions considered as the binding of Ni and Co with carboxyl and phosphate groups. Similarly, the evaluation of AMIC3 (B. cerus) spectra it revealed that there was a change in peak at 3500–3200 cm-1 regions in spectrum of Ni and Co and that was considered as the binding of Ni and Co with amino and hydroxyl group. While a change in peak at 2900-3000 cm−1 regions in spectrum of Ni and Co was considered as the binding of Ni and Co with –CH2 groups combined with that of the CH3 groups. A similar change in peak at 1300–1067 cm−1 regions considered as the binding of Ni and Co with carboxyl and phosphate groups. The results of the present study are in agreement with Park et al. 2005 who performed a similar study and described that a peak at 3500–3200 cm-1 region is due to the stretching of the N–H bond of amino groups and indicates bonded hydroxyl group. Similar- ly, Kazy et al. (2006) [21] described that the absorption peaks at 2900–3000 cm−1 are attributed to the asymmetric stretching of C–H bond of the –CH2 groups combined with that of the CH3 groups. Pistorius, 1995 [29] described that the peaks in the range 1300–1067 cm−1 are attributable to the presence of carboxyl and phosphate groups. Pradhan et al., 2007; [28] Volesky, 2007 [48] insisted that mainly functional groups including (hydroxyl, car- bonyl, carboxyl, sulfonate, amide, imidazole, phosphonate and phosphodiester) are responsible for the biosorption of metals. Quintelas et al. 2009 [30] performed a similar study and observed that functional groups on the biomass, such as hydroxyl, carbox- yl and phosphate groups, would be the main binding sites for bi- osorption of the studied heavy metals by E. coli. Similar results were documented by Kang et al. (2006) who compared the FT-IR spectra of pristine and chromium loaded biomass and found that P. aeruginosa before and after metal binding indicated that –NH is involved in Cr (VI) biosorption. References 1. Abbas SZ, Rafatullah M, Ismail N, Lalung J. Isolation, identifica- tion and characterization of cadmium resistant Pseudomonas sp. M3 from Industrial Wastewater. Journal of Waste Management. 2014; 160398-16403. 2. 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  • 11. United Prime Publications LLC., https://acmcasereport.org/ 11 Volume 12 Issue 5 -2023 Research Article 51. Zaheer A, Mirza BS, Mclean JE, Yasmin S, Shah TM, Malik TA, Mirza MS. Association of plant growth-promoting Serratia spp. with the root nodules of chickpea. Research in Microbiology. 2016; 167: 510-520.