Triskelion developed an integrated LC-MS method to simultaneously quantify therapeutic proteins and quantify hemolysis in biological samples. The method uses tryptic peptides from hemoglobin as markers for hemolysis that are analyzed by LC-MS/MS alongside the target protein. This allows for objective hemolysis quantification without extra sample volume. The method was tested on cynomolgus monkey serum samples, showing UV-VIS and LC-MS results correlated better than visual hemolysis estimates. The concept can be applied to other sample types and parameters by selecting appropriate markers.
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...IOSR Journals
A rapid, simple and specific method for estimation of Mefenamic acid in human plasma was validated using Indomethacin as internal standard. The analyte and internal standard were extracted from plasma using simple solid phase extraction. The compound were separated on a reverse-phase column with an isocratic mobile phase consisting of 2 mM Ammonium Acetate in Water and acetonitrile (20:80, v/v) and detected by tandem mass spectrometry in negative ion mode. The ion transition recorded in multiple reaction monitoring mode were m/z 240.1 196.0 for Mefenamic acid and m/z 356.1312.0 for internal standard. Linearity in plasma was observed over the concentration range 35.000 – 7000.000 ng/mL for Mefenamic acid. The cv of the assay was 4.89 % to 5.98 % and accuracy was 99.36 to 102.20 % Intra and Interday respectively at LLOQ level. The validated method was applied to bioequivalence study of 250 mg Mefenamic acid in 28 healthy human volunteers. Total 50 samples from individual volunteers identified as Haemolyzed which were analyze initial and repeat again to cross check the method reproducibity for Haeamolysis effect and compared which found acceptable range
Investigating Novel Methods to Reduce Cholesterol Levels (Research Report)Tony Ng
In this study, we used everyday food items such as lactic acid bacteria (found in yogurt), sunflower seeds and kidney beans, to either absorb cholesterol in the gut or inhibit cholesterol synthesis in the body. Findings can potentially provide doctors and health experts with an alternative to statins, cholesterol-lowering drugs that may lead to side effects. As future work, we can explore the chemical compound present in the natural extracts that help inhibit cholesterol synthesis, and if possible, carry out trials in vivo to better determine the effects of these extracts.
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...IOSR Journals
A rapid, simple and specific method for estimation of Mefenamic acid in human plasma was validated using Indomethacin as internal standard. The analyte and internal standard were extracted from plasma using simple solid phase extraction. The compound were separated on a reverse-phase column with an isocratic mobile phase consisting of 2 mM Ammonium Acetate in Water and acetonitrile (20:80, v/v) and detected by tandem mass spectrometry in negative ion mode. The ion transition recorded in multiple reaction monitoring mode were m/z 240.1 196.0 for Mefenamic acid and m/z 356.1312.0 for internal standard. Linearity in plasma was observed over the concentration range 35.000 – 7000.000 ng/mL for Mefenamic acid. The cv of the assay was 4.89 % to 5.98 % and accuracy was 99.36 to 102.20 % Intra and Interday respectively at LLOQ level. The validated method was applied to bioequivalence study of 250 mg Mefenamic acid in 28 healthy human volunteers. Total 50 samples from individual volunteers identified as Haemolyzed which were analyze initial and repeat again to cross check the method reproducibity for Haeamolysis effect and compared which found acceptable range
Investigating Novel Methods to Reduce Cholesterol Levels (Research Report)Tony Ng
In this study, we used everyday food items such as lactic acid bacteria (found in yogurt), sunflower seeds and kidney beans, to either absorb cholesterol in the gut or inhibit cholesterol synthesis in the body. Findings can potentially provide doctors and health experts with an alternative to statins, cholesterol-lowering drugs that may lead to side effects. As future work, we can explore the chemical compound present in the natural extracts that help inhibit cholesterol synthesis, and if possible, carry out trials in vivo to better determine the effects of these extracts.
Improved coverage of the proteome using gel eluted liquidExpedeon
It has long been understood that sample fractionation is critically important to generating quality, comprehensive proteomics data. In spite of the continual improvements in speed and sensitivity of mass spectrometers, these instruments are still unable to adequately overcome the enormous challenge
of most biological samples without multiple dimensions of separation prior to mass analysis.
The IOSR Journal of Pharmacy (IOSRPHR) is an open access online & offline peer reviewed international journal, which publishes innovative research papers, reviews, mini-reviews, short communications and notes dealing with Pharmaceutical Sciences( Pharmaceutical Technology, Pharmaceutics, Biopharmaceutics, Pharmacokinetics, Pharmaceutical/Medicinal Chemistry, Computational Chemistry and Molecular Drug Design, Pharmacognosy & Phytochemistry, Pharmacology, Pharmaceutical Analysis, Pharmacy Practice, Clinical and Hospital Pharmacy, Cell Biology, Genomics and Proteomics, Pharmacogenomics, Bioinformatics and Biotechnology of Pharmaceutical Interest........more details on Aim & Scope).
All manuscripts are subject to rapid peer review. Those of high quality (not previously published and not under consideration for publication in another journal) will be published without delay.
Alcohol induced metabolic alterations - A Case based discussionNamrata Chhabra
I shall proceed through a case based discussion and highlight a few of the metabolic alterations that have been found in the patient under study and of course these are the commonest metabolic alterations that change the whole scenario.
The objective of my discussion is to provide you with a solid foundation of alcohol induced metabolic alterations. The knowledge thus acquired will help you to make spontaneous diagnosis and plan the relevant treatment in the clinical settings.
The case details are with you. There are 3 questions related to the problems the patient is having in this case, and there are 4 options for each of the questions. Using your prior knowledge, try to select the most appropriate answer, you have only one minute to solve the answer.
EFFECT OF DIFFERENT CHROMATOGRAPHIC FRACTION AQUEOUS AND ALCOHOLIC EXTRACTS O...Jing Zang
In recent studies Teucrium polium(T. polium ) was known as a hypoglycemic plants. But further research is needed to better understand the effect of Teucrium polium and biological active part of it. The purpose of this investigation is to examine the effect of different chromatographic fractions of aqueous and alcoholic extract of this plant on the level of insulin secretion and glucose content in hyperglycemic rat model. Also, our aim is determination of biological active fraction of aqueous and alcoholic extract of this plant. This study was carried out on the 36 rats. Hyperglycemia induced by administrating of 50 mg/kg alloxan intraperitoneally and glucose level was monitored for hyperglycemic status. Hyperglycemic was confirmed by blood glucose measurement. In each experiment 100 grams of Teucrium polium aerial parts powder were boiled with 2 Litter of distilled water for 36 h. The decoction preparation was then filtered through a gauz cloth followed by filtration through filter paper. The extract was evaporated to one-fifth of its original volume and kept at 4oC until its use. Determination of different fraction aqueous extract effect of Teucrium polium on glucose level and insulin secretion was carried out. Blood was collected from the tail of the rats. Then glucose and insulin level was evaluated. The hyperglycemic animals showed significant decrease in the blood glucose level in rats administered with fourth fraction compared with other factions. Administration of fourth fraction Teucrium polium aerial parts extract cause increase in insulin levels in alloxan-treated rats. Results suggest that treatment of fourth fraction Teucrium polium aerial parts extract may be useful in preventing the increase of glucose level in hyperglycemic rats. The interesting phenomenon of our results has shown that fourth fraction given parenterally possesses a hypoglycemic effect in alloxan hyperglycemic rats. Fourth fraction was found biological active and to be responsive to glucose challenge as evidenced by increase in insulin secretion.
Clinical chemistry uses chemical processes to measure levels of chemical components in the blood. It is very useful for the early diagnostic of disease and for monitoring organ function. The most common specimens used in clinical chemistry are blood and urine. Table 1 shows the common blood tests and measurable items using UV/Vis spectrophotometers.In this application note, the cholesterol level in human serum was determined by the enzymatic method using the LAMBDA™ 465 UV/Vis Spectrophotometer and UV Lab™ software.
Improved coverage of the proteome using gel eluted liquidExpedeon
It has long been understood that sample fractionation is critically important to generating quality, comprehensive proteomics data. In spite of the continual improvements in speed and sensitivity of mass spectrometers, these instruments are still unable to adequately overcome the enormous challenge
of most biological samples without multiple dimensions of separation prior to mass analysis.
The IOSR Journal of Pharmacy (IOSRPHR) is an open access online & offline peer reviewed international journal, which publishes innovative research papers, reviews, mini-reviews, short communications and notes dealing with Pharmaceutical Sciences( Pharmaceutical Technology, Pharmaceutics, Biopharmaceutics, Pharmacokinetics, Pharmaceutical/Medicinal Chemistry, Computational Chemistry and Molecular Drug Design, Pharmacognosy & Phytochemistry, Pharmacology, Pharmaceutical Analysis, Pharmacy Practice, Clinical and Hospital Pharmacy, Cell Biology, Genomics and Proteomics, Pharmacogenomics, Bioinformatics and Biotechnology of Pharmaceutical Interest........more details on Aim & Scope).
All manuscripts are subject to rapid peer review. Those of high quality (not previously published and not under consideration for publication in another journal) will be published without delay.
Alcohol induced metabolic alterations - A Case based discussionNamrata Chhabra
I shall proceed through a case based discussion and highlight a few of the metabolic alterations that have been found in the patient under study and of course these are the commonest metabolic alterations that change the whole scenario.
The objective of my discussion is to provide you with a solid foundation of alcohol induced metabolic alterations. The knowledge thus acquired will help you to make spontaneous diagnosis and plan the relevant treatment in the clinical settings.
The case details are with you. There are 3 questions related to the problems the patient is having in this case, and there are 4 options for each of the questions. Using your prior knowledge, try to select the most appropriate answer, you have only one minute to solve the answer.
EFFECT OF DIFFERENT CHROMATOGRAPHIC FRACTION AQUEOUS AND ALCOHOLIC EXTRACTS O...Jing Zang
In recent studies Teucrium polium(T. polium ) was known as a hypoglycemic plants. But further research is needed to better understand the effect of Teucrium polium and biological active part of it. The purpose of this investigation is to examine the effect of different chromatographic fractions of aqueous and alcoholic extract of this plant on the level of insulin secretion and glucose content in hyperglycemic rat model. Also, our aim is determination of biological active fraction of aqueous and alcoholic extract of this plant. This study was carried out on the 36 rats. Hyperglycemia induced by administrating of 50 mg/kg alloxan intraperitoneally and glucose level was monitored for hyperglycemic status. Hyperglycemic was confirmed by blood glucose measurement. In each experiment 100 grams of Teucrium polium aerial parts powder were boiled with 2 Litter of distilled water for 36 h. The decoction preparation was then filtered through a gauz cloth followed by filtration through filter paper. The extract was evaporated to one-fifth of its original volume and kept at 4oC until its use. Determination of different fraction aqueous extract effect of Teucrium polium on glucose level and insulin secretion was carried out. Blood was collected from the tail of the rats. Then glucose and insulin level was evaluated. The hyperglycemic animals showed significant decrease in the blood glucose level in rats administered with fourth fraction compared with other factions. Administration of fourth fraction Teucrium polium aerial parts extract cause increase in insulin levels in alloxan-treated rats. Results suggest that treatment of fourth fraction Teucrium polium aerial parts extract may be useful in preventing the increase of glucose level in hyperglycemic rats. The interesting phenomenon of our results has shown that fourth fraction given parenterally possesses a hypoglycemic effect in alloxan hyperglycemic rats. Fourth fraction was found biological active and to be responsive to glucose challenge as evidenced by increase in insulin secretion.
Clinical chemistry uses chemical processes to measure levels of chemical components in the blood. It is very useful for the early diagnostic of disease and for monitoring organ function. The most common specimens used in clinical chemistry are blood and urine. Table 1 shows the common blood tests and measurable items using UV/Vis spectrophotometers.In this application note, the cholesterol level in human serum was determined by the enzymatic method using the LAMBDA™ 465 UV/Vis Spectrophotometer and UV Lab™ software.
Evaluation of Red Cell Hemolysis in Packed Red Cells During Processing and St...Apollo Hospitals
Storage of red cells causes a progressive increase in hemolysis. Inspite of the use of additive solutions for storage and filters for leucoreduction some amount of hemolysis is still inevitable. The extent of hemolysis however should not exceed the permissible threshold for hemolysis even on the 42nd day of storage.
Characterization of intact antibodies by pre-fractionation using gel electrop...Expedeon
Antibodies represent an important class of proteins due to their central role in the immune response. Moreover, there is an increasing interest in the use of recombinant antibodies as novel drug therapies.
Challenges in interpreting serum protein electrophoresis. Requires an approach to recognize pattern within the various protein fractions & differentiate systemic inflammatory response from abnormal antibody production due to neoplastic disorders.Presence of M-band does not always correlate with plasma cell disorders but can be seen some lymphomas, chronic leukaemias, systemic amyloidosis hence need further ancillary tests for diagnosis of aetiology for the M-band.
The IOSR Journal of Pharmacy (IOSRPHR) is an open access online & offline peer reviewed international journal, which publishes innovative research papers, reviews, mini-reviews, short communications and notes dealing with Pharmaceutical Sciences( Pharmaceutical Technology, Pharmaceutics, Biopharmaceutics, Pharmacokinetics, Pharmaceutical/Medicinal Chemistry, Computational Chemistry and Molecular Drug Design, Pharmacognosy & Phytochemistry, Pharmacology, Pharmaceutical Analysis, Pharmacy Practice, Clinical and Hospital Pharmacy, Cell Biology, Genomics and Proteomics, Pharmacogenomics, Bioinformatics and Biotechnology of Pharmaceutical Interest........more details on Aim & Scope).
All manuscripts are subject to rapid peer review. Those of high quality (not previously published and not under consideration for publication in another journal) will be published without delay.
In this presentation important aspects of target selection and internal standardization in protein LC-MS are discussed. In addition there are 3 slides about coronavirus protein LC-MS considerations.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
2. 2Integrated hemolysis LC-MS monitoring
Target selection
Tryptic peptide targets were selected from
hemoglobin, see Table 1. Besides applying typical
theoretical and experimental target selection
criteria, special attention was given to the generic
applicability of the target to matrices obtained from
the most common (laboratory) animals. The tryptic
peptide LLVVYPWTQR has only few variations
considering the summarized animals in Table 1.
However, LC and MS/MS settings, see the
Experimental section, should be adapted to
implement a suitable module when a target
variation is analyzed.
While visual inspection of samples is simple and
cost-effective, it is very subjective. A color chart
could improve results but is still not completely
objective. Determination of hemolysis using UV-VIS
is quick and easy, but only feasible when there is
sufficient sample material available. It would be
preferable to systematically provide samples with an
objective value for hemolysis7 without using
additional sample volume, whilst saving time and
costs. Therefore Triskelion developed an UPLC-MS
module to meet these preferences. In this approach
a tryptic peptide from hemoglobin, which causes the
red color of blood through the porphyrin rings in the
heme groups, is targeted. The LC-MS results are
compared with UV-VIS detection and visual
inspection. The LC-MS method module can be
applied when simultaneously therapeutic proteins
are quantified in biological matrix after non-selective
protein purification and/or direct digestion. The
basic concept can be implemented in several other
applications and can be integrated with existing
quantitative protein LC-MS methods, but needs to
be modified considering the sample purification
steps and analytical requirements for the analyte of
interest.
Table 1: tryptic targets from hemoglobin.
Experimental
A set of serum samples, with different degrees of
hemolysis, was visually inspected, the UV-VIS
absorbance was measured and the peptides
LLVVYPWTQR and VNVDEVGGEALGR were
determined after tryptic digestion and UPLC-MS/MS.
Visually, samples were classified as 0, 0.05 or 0.1
(no, little, heavy hemolysis). UV absorbance was
measured at 570 nm (reference 655 nm)8 using 50 µl
sample with a SpectraMax M5 (Molecular devices).
Samples were digested with trypsin and analyzed
using an HSS T3 column (100 x 2.1 mm) on a Waters
Xevo TQ-S. The LLVVYPWTQR precursor [M+2H]2+
ions had m/z 637.85 and the quantifier and qualifier
ions were either the y4
+ or the y5
+ product ions at
m/z 590.30 and 687.35. The VNVDEVGGEALGR
precursor [M+2H]2+ ions had m/z 657.85 and the
quantifier and qualifier ions were the y7
+ and y8
+
product ions at m/z 659.35 and 758.40, respectively.
3. 3
Results and discussion
Depending on the animal species of interest, LC-
MS/MS targets can be selected according to Table 1.
These targets are either generic or slightly different
between animal species. As an example, in Figure 2
extracted chromatograms are provided for non-
hemolyzed feline serum (blank) and hemolyzed
feline serum, which show the signals for a digested
analyte protein and for a hemoglobin target, after
having applied a direct digestion approach.
Figure 2: Extracted chromatograms of analyte protein
target and LLV hemoglobin target in (hemolyzed) feline
serum.
The selected part of the hemoglobin sequence is
identical between cat, human, cynomolgus monkey
and others. In Figure 3 the results of a comparative
analysis are shown for a set of cynomolgus monkey
serum samples. The serum samples were visually
inspected (indicated by the size and color of the
spheres), their UV-VIS absorbance was determined
(x-axis) and the hemoglobin LLV target was analyzed
using LC-MS (y-axis). In Figure 4 the results obtained
for the same cynomolgus serum samples are shown
in a histogram, including the results for the VNV
target and a second visual inspection.
Figure 3: Results of visual inspection, UV-VIS absorbance
and LC-MS analysis (LLV) of a set of cynomolgus monkey
serum samples.
Figures 3 and 4 illustrate that the UV-VIS and LC-MS
results correlated quite well in the analyzed
samples. The visual inspection however, most
probably due to its subjectivity, could lead to wrong
assignment of the extent of hemolysis. Typically,
hemolysis is visible in serum or plasma starting at a
hemoglobin concentration of 200 mg/L9 or 300
mg/L10. The marker protein used to determine
hemolysis in this study was hemoglobin. The normal
hemoglobin levels in whole blood (WHO reference
values) are 13.8-17.2 g/dL for adult males and 12.1-
15.1 g/dL for adult (non-pregnant) females.
Figure 4: Histogram of the results of visual inspection, UV-
VIS absorbance and LC-MS analysis (LLV and VNV) of a set
of cynomolgus monkey serum samples.
Integrated hemolysis LC-MS monitoring
4. References
1EMA. Guideline on Bioanalytical Method Validation. EMA, Committee for
Medicinal Products for Human Use (CHMP), London, UK (2011).
2US FDA. Guidance for Industry: Bioanalytical Method Validation. US Department
of Health and Human Services, US FDA, Center for Drug Evaluation and Research,
Rockville, MD, USA (2018).
3ICH. Bioanalytical Method Validation M10. ICH Harmonized Guideline (draft
version, endorsed on 26 February 2019).
4Hughes NC, Bajaj N, Fan J, Wong EYK. Assessing the matrix effects of hemolyzed
samples in bioanalysis. Bioanalysis 2009; 1: 1057–1066.
5Kleinnijenhuis AJ, Staal YCM, Duistermaat E, Engel R, Woutersen RA. The
determination of exogenous formaldehyde in blood of rats during and after
inhalation exposure. Food and Chemical Toxicology 2013; 52: 105-112.
Conclusions and future outlook
In the present study the principle of quantifying the
extent of hemolysis using an LC-MS method module
was shown. The basic methodology and approach
can also be applied for parallel assessment of other
parameters in particular sample types, such as
hyperlipidemic samples (after assignment of
representative markers) or icteric samples
(bilirubin). It should of course be noted that the
sample purification procedure for the analyte and
the parameter assessed in parallel need to be
(made) compatible to obtain accurate results.
A calibration curve was prepared from human
hemoglobin (Sigma-Aldrich, product no. H7379) in
pooled gender human plasma in the 17-2717 µg/ml
concentration range and the results are shown in
Figure 5 (blue points). Spikes of human hemoglobin
were prepared at 1358 µg/ml in cynomolgus
monkey, feline and human serum (orange points),
which corresponds to approximately 1% hemolysis.
The mean obtained recovery was 89% (RSD 15%),
showing acceptable method performance.
Finally, three 2% human hemolyzed serum and
plasma samples were purchased and analyzed using
the presented method. These samples were found
to contain 2.2 mg/ml (female serum), 3.1 mg/ml
(female plasma) and 3.1 mg/ml (pooled plasma)
hemoglobin. Although detailed information about
the donors and preparation of the hemolysate was
not available, these concentration are close to the
normal hemoglobin levels. As the presence of
bilirubin (icteric samples) or lipemia/turbidity may
impair visual inspection of samples9 and UV-VIS
measurements, LC-MS analysis of hemoglobin
targets might provide more accurate and objective
values for the extent of hemolysis.
Figure 5: Calibration curve of human hemoglobin in
pooled gender human plasma in the 17-2717 µg/ml
concentration range (blue) and spikes of human
hemoglobin in cynomolgus monkey, feline and human
serum (orange), LLV hemoglobin target.
6Ingelse B, et al. European Bioanalysis Forum: recommendation on dealing with
hemolyzed and hyperlipidemic matrices (White paper). Bioanalysis 2014; 6: 3113-
3120.
7Lippi G, Cadamuro J, Von Meyer A, Simundic A. Practical recommendations for
managing hemolyzed samples in clinical chemistry testing. Clinical Chemistry and
Laboratory Medicine 2018; 56: 718-727.
8Saha K, Moyana DF, Rotello VM. Protein coronas suppress the hemolytic activity
of hydrophilic and hydrophobic nanoparticles. Materials Horizons 2014; 1: 102–
105.
9Dolci A, Panteghini M. Harmonization of automated hemolysis index assessment
and use: Is it possible? Clinica Chimica Acta 2014; 432: 38-43.
10Thomas L. Haemolysis as Influence & Interference Factor. Journal of the
International Federation of Clinical Chemistry and Laboratory Medicine 2002; 13:
95-98.
4Integrated hemolysis LC-MS monitoring