The document discusses fixation and processing of tissue specimens. It describes fixation as a process that preserves cells and tissues in a physical and chemical state to prevent biochemical changes and morphological distortion. The goals of fixation are to maintain the original tissue structure and prevent autolysis and bacterial growth. Common fixatives include formaldehyde and ethanol. The document outlines various types of fixatives and factors that influence fixation like buffer, pH, duration, temperature and concentration. It also discusses processing of fixed tissue, which provides rigidity for sectioning. Processing is influenced by viscosity, agitation, heat, vacuum and pressure. The document notes potential artifacts from improper fixation like formalin pigment or prolonged fixation effects.
This document discusses the process of tissue processing in histology and histopathology laboratories. [1] Tissue samples are obtained from biopsies and autopsies and undergo histotechniques to prepare them for microscopic examination. [2] The key steps include fixation, processing, embedding in paraffin wax, sectioning, staining, and mounting. [3] Automated equipment is now commonly used to improve efficiency at many steps such as tissue processing, sectioning, and staining.
This document discusses tissue fixation in histopathology. It describes the various stages of histopathology including fixation, processing, embedding, sectioning and staining of tissues. It explains the importance of fixation in preventing autolysis and putrefaction of tissues. The key properties and reactions of common fixatives like formaldehyde and glutaraldehyde are outlined. Factors that can affect fixation quality including temperature, pH, concentration and duration of fixation are also summarized. Finally, different classifications of fixatives are presented based on their structural and functional properties.
This document discusses histotechniques related to fixation and decalcification of tissues for microscopic examination. It describes the objectives and ideal properties of fixatives, as well as common fixatives used such as formaldehyde, glutaraldehyde, and picric acid. Factors that influence fixation quality like temperature, concentration, and duration are addressed. The document also covers decalcification techniques and factors that affect the decalcification process. Special considerations for fixing different tissues are outlined.
The H&E stain is the most common stain used in histology. It involves staining tissue samples with hematoxylin, which stains nuclei blue, followed by a counterstain with eosin, which stains cytoplasm and other tissue structures pink. The staining process involves deparaffinization, hydration, hematoxylin staining, differentiation, bluing, eosin counterstaining, dehydration, clearing, and coverslipping. Both automated and manual methods can be used to perform the H&E stain, and quality control measures help ensure consistent, high-quality results.
Tissue processing involves removing water from tissue and replacing it with paraffin wax to provide rigidity for microscopic examination. The main steps are fixation, dehydration using increasing concentrations of alcohol, clearing with xylene to remove alcohol, and impregnation with molten paraffin wax. Automated tissue processors complete this process overnight using different stations for each step. Factors like tissue size, agitation, heat, and vacuum pressure influence effective processing. Ethyl alcohol is most commonly used for dehydration, while xylene is used for clearing prior to paraffin wax impregnation and embedding.
This is a presentation covering all techniques in histopathology. Comprehensive coverage of all related aspects.. Useful for postgraduate Pathology students and practitioners.
This document discusses the process of microtomy, which involves preparing tissue samples for microscopic examination through sectioning. Key steps include:
1) Fixing tissue samples in formalin to preserve structure, then dehydrating them through a series of alcohol baths and clearing them in xylene.
2) Embedding tissue samples in paraffin wax, allowing it to solidify into blocks.
3) Sectioning the paraffin blocks with a microtome into thin slices, mounting them onto slides, and staining for examination.
4) Important considerations for microtomy include knife selection and maintenance, proper trimming and section thickness, and techniques for difficult tissues.
This document discusses the process of tissue processing in histology and histopathology laboratories. [1] Tissue samples are obtained from biopsies and autopsies and undergo histotechniques to prepare them for microscopic examination. [2] The key steps include fixation, processing, embedding in paraffin wax, sectioning, staining, and mounting. [3] Automated equipment is now commonly used to improve efficiency at many steps such as tissue processing, sectioning, and staining.
This document discusses tissue fixation in histopathology. It describes the various stages of histopathology including fixation, processing, embedding, sectioning and staining of tissues. It explains the importance of fixation in preventing autolysis and putrefaction of tissues. The key properties and reactions of common fixatives like formaldehyde and glutaraldehyde are outlined. Factors that can affect fixation quality including temperature, pH, concentration and duration of fixation are also summarized. Finally, different classifications of fixatives are presented based on their structural and functional properties.
This document discusses histotechniques related to fixation and decalcification of tissues for microscopic examination. It describes the objectives and ideal properties of fixatives, as well as common fixatives used such as formaldehyde, glutaraldehyde, and picric acid. Factors that influence fixation quality like temperature, concentration, and duration are addressed. The document also covers decalcification techniques and factors that affect the decalcification process. Special considerations for fixing different tissues are outlined.
The H&E stain is the most common stain used in histology. It involves staining tissue samples with hematoxylin, which stains nuclei blue, followed by a counterstain with eosin, which stains cytoplasm and other tissue structures pink. The staining process involves deparaffinization, hydration, hematoxylin staining, differentiation, bluing, eosin counterstaining, dehydration, clearing, and coverslipping. Both automated and manual methods can be used to perform the H&E stain, and quality control measures help ensure consistent, high-quality results.
Tissue processing involves removing water from tissue and replacing it with paraffin wax to provide rigidity for microscopic examination. The main steps are fixation, dehydration using increasing concentrations of alcohol, clearing with xylene to remove alcohol, and impregnation with molten paraffin wax. Automated tissue processors complete this process overnight using different stations for each step. Factors like tissue size, agitation, heat, and vacuum pressure influence effective processing. Ethyl alcohol is most commonly used for dehydration, while xylene is used for clearing prior to paraffin wax impregnation and embedding.
This is a presentation covering all techniques in histopathology. Comprehensive coverage of all related aspects.. Useful for postgraduate Pathology students and practitioners.
This document discusses the process of microtomy, which involves preparing tissue samples for microscopic examination through sectioning. Key steps include:
1) Fixing tissue samples in formalin to preserve structure, then dehydrating them through a series of alcohol baths and clearing them in xylene.
2) Embedding tissue samples in paraffin wax, allowing it to solidify into blocks.
3) Sectioning the paraffin blocks with a microtome into thin slices, mounting them onto slides, and staining for examination.
4) Important considerations for microtomy include knife selection and maintenance, proper trimming and section thickness, and techniques for difficult tissues.
Embedding is the process of enclosing tissue specimens in an embedding medium such as paraffin wax to support the specimen for sectioning. The choice of embedding medium depends on the type of tissue, microscope, and microtome being used. Common embedding mediums include paraffin wax, celloidin, resin, and gelatin. Paraffin wax is most widely used due to its hardness and ability to produce high quality sections. Proper orientation of the specimen in the embedding block is important for pathological examination and diagnosis.
The document discusses the principles and procedures of preparing and analyzing frozen tissue sections. Key points:
1. When tissue is frozen, the water turns to ice which embeds and firms the tissue, allowing for sectioning. Temperature can alter the consistency, with colder being harder. Most tissues section well around -25°C.
2. Tissue should be frozen or fixed promptly after collection to prevent autolysis and drying artifacts.
3. Freeze drying minimizes loss of soluble substances and displacement of cell constituents during processing. It involves rapid freezing, then sublimating the ice at high temperature while the dried tissue is embedded.
4. Cryostats maintain the required low cutting temperatures, typically between
This document discusses frozen sections and cryostats. Frozen sections are prepared without dehydration or embedding to enable rapid diagnosis within 10 minutes. They have applications in intraoperative diagnosis, enzyme histochemistry, immunohistochemistry, and other techniques. Tissue is frozen using liquid nitrogen or other cryogenic methods, turning water within the tissue to ice which acts as an embedding medium for sectioning. Cryostats maintain low temperatures, typically -20 to -30°C, for sectioning frozen tissue blocks. Optimal cutting temperatures vary by tissue type and whether the tissue is fixed.
This document discusses tissue fixation in pathology. It begins by describing the overall tissue processing steps and importance of fixation. The main types of fixatives are then outlined, including coagulant, cross-linking, and compound fixatives. Formalin and glutaraldehyde fixation are discussed in depth. Key factors that influence fixation quality like buffer pH, fixation duration, tissue size, and temperature are also summarized. The document provides a comprehensive overview of fixation in pathology.
This document discusses fixatives used in histopathology. It describes the process of fixation and how fixatives preserve tissue by denaturing or precipitating proteins. The ideal properties of a fixative are described, including preventing autolysis and allowing for staining. Common fixatives are classified and their mechanisms and uses are explained. Factors that affect fixation such as temperature, size, volume ratio, time, choice of fixative, and penetration are also summarized.
Histology is the study of tissues at a microscopic level. It involves preparing tissue samples using processes like fixation, dehydration, embedding, sectioning, and staining. Different types of microscopes like light, transmission electron, and scanning electron microscopes are used to examine cells and structures at varying levels of magnification, resolution, and contrast. Common staining techniques include hematoxylin and eosin, periodic acid-schiff, and trichrome stains which allow visualization of different cellular components. Histochemistry and immunocytochemistry further aid in localization of macromolecules within tissues.
This document provides an overview of tissue fixation techniques. It defines fixation as a process that preserves tissues in a state close to how they appeared when living. This is achieved by preventing autolysis and maintaining cellular morphology. The document discusses various types of fixatives including aldehydes, alcohols, and oxidizing agents. It also covers the aims of fixation, how different fixatives work, commonly used fixatives for different tissue and cellular components, and potential artifacts. Fixation is essential for histological examination and aims to maintain tissues for further analysis.
This document discusses tissue fixation, which involves using chemicals to preserve tissue samples for examination. It defines fixation as preventing post-mortem changes while maintaining tissue characteristics. The goals of fixation are to prevent autolysis and putrefaction, penetrate tissues rapidly and evenly, harden tissues, and not interfere with staining. Common fixatives discussed include formalin, glutaraldehyde, Bouin's solution, and Zenker's solution. Factors that influence fixation such as temperature, specimen size, fixation time, and choice of fixative are also reviewed.
1. The document discusses the various steps involved in tissue processing for microscopic examination, which includes fixation, processing, embedding, sectioning and staining of tissues.
2. Key steps include fixation of tissues using formalin to preserve structure, dehydration using increasing concentrations of alcohol, clearing with xylene, impregnation and embedding in paraffin wax.
3. Thin sections are then cut from the paraffin blocks using a microtome and stained, usually with hematoxylin and eosin, for microscopic examination.
Frozen sections of tissue are prepared using a cryostat to quickly obtain thin sections for histological examination and diagnosis. A cryostat maintains tissue at freezing temperatures to allow sectioning without ice crystal formation. Tissue is mounted on a chuck and placed in the cryostat, then sectioned and mounted on slides for staining. Frozen sections allow rapid diagnosis but have poorer morphology and staining than fixed tissue sections.
This document discusses various tissue fixation methods used in histopathology. Fixation preserves tissues for examination by hardening them and preventing degradation. The ideal fixative kills and penetrates tissue quickly without shrinkage while stabilizing components and enhancing staining. Formalin is commonly used as it fixes most tissues well and is compatible with many stains, though it causes some shrinkage and nucleic acid degradation over time. Other fixatives include Bouin's solution, B-Plus, Zenker's, alcohol and glutaraldehyde. Proper disposal of fixatives and fixed tissues is also important due to their toxic, infectious or hazardous properties.
This document describes the steps involved in tissue processing from fixation to embedding in wax. It discusses obtaining fresh specimens, fixation in formalin, dehydration through an alcohol series, clearing in xylene, infiltration and embedding in paraffin wax. Sections are then cut on a microtome, mounted on slides and stained, usually with hematoxylin and eosin, to visualize tissue structures microscopically. Proper processing is important to preserve tissue morphology and produce high quality stained sections for diagnostic examination.
The document discusses tissue fixation and fixatives. It defines a fixative as a substance that prevents post-mortem changes and preserves the morphological and chemical characteristics of cells and tissues. The aims of fixation include preserving tissues as close to their living state as possible and preventing autolysis and bacterial attack. Common methods of fixation discussed are immersion, perfusion, heat, and vapor fixation. Types of fixatives covered include formaldehyde, alcohols, picric acid, mercuric chloride, and glutaraldehyde. Factors that influence fixation quality like fixation time and temperature are also addressed.
This document provides an overview of tissue fixation. It begins with an introduction to fixation and its importance in histology. The main functions of fixatives are to prevent autolysis and putrefaction of tissue. Various fixation methods and types of fixatives are described, including aldehydes, metallic salts, picric acid, alcohols, chromates, and osmium tetroxide. The document discusses the reactions of fixatives with proteins, nucleic acids, lipids, and carbohydrates. Common fixatives like formaldehyde and glutaraldehyde are compared. Factors affecting fixation and the effects of fixation are also summarized.
This document discusses the process of tissue processing for histological examination. It involves several key steps: specimen identification and labelling, gross examination, fixation, dehydration, clearing, infiltration, embedding, sectioning, and staining. Fixation using formalin or other fixatives preserves tissue structure. Dehydration removes water and replaces it with alcohol or other solvents to allow for infiltration of paraffin wax. The wax infiltrates and impregnates the tissue, allowing it to be sectioned thinly for microscopic examination after staining. The document provides details on common fixation and processing methods and their purposes in preparing tissue for histological analysis.
this is a ppt on histotechniques,, all techniques from receiving samples to block making to sectioning to staining are discusses in detail..useful for postgraduate pathology students and lab technicians
Fixatives are chemicals used to preserve biological tissues from decay. They terminate biochemical reactions and may increase mechanical strength. Fixatives disable enzymes and protect samples from damage. Common fixatives include formaldehyde, glutaraldehyde, osmium tetroxide, alcohols, and picric acid. Fixation aims to inhibit autolysis, preserve tissues, harden them, and improve staining. Factors like temperature, concentration, and duration impact fixation quality. Different tissues require specific fixatives for optimal preservation. An ideal fixative kills cells quickly without damage, penetrates rapidly, prevents decay, hardens tissues, and allows long-term storage.
This document discusses methods for decalcifying bone and teeth for histological examination. It begins with an introduction to decalcification and describes the process of removing calcium ions from bone to make it flexible for pathological investigation. It then classifies common decalcifying agents such as acids, chelating agents, and other solutions. The document discusses factors that affect the rate of decalcification and tests used to determine when decalcification is complete. It provides details on processing and staining decalcified bone and teeth. The document concludes with precautions for decalcification and references.
Hematoxylin and eosin (H&E) staining is the most common histology stain. Hematoxylin stains cell nuclei blue by binding to DNA and RNA, while eosin stains cytoplasm and extracellular components pink. The staining process involves deparaffinizing tissue sections, staining with hematoxylin, differentiating with acid to remove excess stain, staining with eosin, and mounting for examination. Hematoxylin is extracted from logwood and oxidized to hematin, which binds tissue as a cationic dye with a mordant like alum. Eosin Y is the typical counterstain used to visualize cytoplasm. Together, H&E staining provides excellent contrast to study cell and
This document discusses various fixatives used for small biopsy specimens and their applications. It describes the ideal properties of a fixative and the mechanisms of different types of fixatives including aldehydes, mercurials, dichromates, picric acid and alcohol-containing fixatives. For each fixative, the document outlines their composition, principle of action, tissues they are suitable for, fixation time and advantages and disadvantages. It also provides recommendations for fixation of specific tissue biopsies like renal, muscle and liver biopsies. The conclusion emphasizes the importance of using an appropriate fixative to ensure optimal specimen evaluation and diagnosis.
Fixatives used in tissue processing - Histopath techniques.Kaaviya Subramaniam
This document discusses various types of fixatives used to preserve cell and tissue structure. It begins by explaining how living cells require oxygen and nutrients from blood circulation, and will die when cut off from this supply. Fixation is needed to preserve tissues as they were in life for histological examination. Various fixatives are then described, including physical, chemical, simple, compound, dehydrant, coagulant, cross-linking, and osmium tetroxide fixatives. The ideal properties and mechanisms of several common fixatives like formaldehyde, glutaraldehyde, picric acid, acetic acid, and mercuric chloride are also summarized.
FIXATIVES in Pathology for Postgraduate and DMLTjenishJebadurai1
This document discusses various fixatives used in histology and cytology techniques. It begins by defining fixation as the process of preserving cells and tissue using physical or chemical methods. Commonly used fixatives include formaldehyde, glutaraldehyde, osmium tetroxide, mercury salts, picric acid, and alcohols. An ideal fixative would be non-toxic, low-cost, and effectively preserve tissue morphology, antigens, and nucleic acids while allowing for long-term storage. Factors like temperature, pH, concentration, and duration impact fixation quality. Proper fixation is important for minimizing artifacts and ensuring high quality staining.
Embedding is the process of enclosing tissue specimens in an embedding medium such as paraffin wax to support the specimen for sectioning. The choice of embedding medium depends on the type of tissue, microscope, and microtome being used. Common embedding mediums include paraffin wax, celloidin, resin, and gelatin. Paraffin wax is most widely used due to its hardness and ability to produce high quality sections. Proper orientation of the specimen in the embedding block is important for pathological examination and diagnosis.
The document discusses the principles and procedures of preparing and analyzing frozen tissue sections. Key points:
1. When tissue is frozen, the water turns to ice which embeds and firms the tissue, allowing for sectioning. Temperature can alter the consistency, with colder being harder. Most tissues section well around -25°C.
2. Tissue should be frozen or fixed promptly after collection to prevent autolysis and drying artifacts.
3. Freeze drying minimizes loss of soluble substances and displacement of cell constituents during processing. It involves rapid freezing, then sublimating the ice at high temperature while the dried tissue is embedded.
4. Cryostats maintain the required low cutting temperatures, typically between
This document discusses frozen sections and cryostats. Frozen sections are prepared without dehydration or embedding to enable rapid diagnosis within 10 minutes. They have applications in intraoperative diagnosis, enzyme histochemistry, immunohistochemistry, and other techniques. Tissue is frozen using liquid nitrogen or other cryogenic methods, turning water within the tissue to ice which acts as an embedding medium for sectioning. Cryostats maintain low temperatures, typically -20 to -30°C, for sectioning frozen tissue blocks. Optimal cutting temperatures vary by tissue type and whether the tissue is fixed.
This document discusses tissue fixation in pathology. It begins by describing the overall tissue processing steps and importance of fixation. The main types of fixatives are then outlined, including coagulant, cross-linking, and compound fixatives. Formalin and glutaraldehyde fixation are discussed in depth. Key factors that influence fixation quality like buffer pH, fixation duration, tissue size, and temperature are also summarized. The document provides a comprehensive overview of fixation in pathology.
This document discusses fixatives used in histopathology. It describes the process of fixation and how fixatives preserve tissue by denaturing or precipitating proteins. The ideal properties of a fixative are described, including preventing autolysis and allowing for staining. Common fixatives are classified and their mechanisms and uses are explained. Factors that affect fixation such as temperature, size, volume ratio, time, choice of fixative, and penetration are also summarized.
Histology is the study of tissues at a microscopic level. It involves preparing tissue samples using processes like fixation, dehydration, embedding, sectioning, and staining. Different types of microscopes like light, transmission electron, and scanning electron microscopes are used to examine cells and structures at varying levels of magnification, resolution, and contrast. Common staining techniques include hematoxylin and eosin, periodic acid-schiff, and trichrome stains which allow visualization of different cellular components. Histochemistry and immunocytochemistry further aid in localization of macromolecules within tissues.
This document provides an overview of tissue fixation techniques. It defines fixation as a process that preserves tissues in a state close to how they appeared when living. This is achieved by preventing autolysis and maintaining cellular morphology. The document discusses various types of fixatives including aldehydes, alcohols, and oxidizing agents. It also covers the aims of fixation, how different fixatives work, commonly used fixatives for different tissue and cellular components, and potential artifacts. Fixation is essential for histological examination and aims to maintain tissues for further analysis.
This document discusses tissue fixation, which involves using chemicals to preserve tissue samples for examination. It defines fixation as preventing post-mortem changes while maintaining tissue characteristics. The goals of fixation are to prevent autolysis and putrefaction, penetrate tissues rapidly and evenly, harden tissues, and not interfere with staining. Common fixatives discussed include formalin, glutaraldehyde, Bouin's solution, and Zenker's solution. Factors that influence fixation such as temperature, specimen size, fixation time, and choice of fixative are also reviewed.
1. The document discusses the various steps involved in tissue processing for microscopic examination, which includes fixation, processing, embedding, sectioning and staining of tissues.
2. Key steps include fixation of tissues using formalin to preserve structure, dehydration using increasing concentrations of alcohol, clearing with xylene, impregnation and embedding in paraffin wax.
3. Thin sections are then cut from the paraffin blocks using a microtome and stained, usually with hematoxylin and eosin, for microscopic examination.
Frozen sections of tissue are prepared using a cryostat to quickly obtain thin sections for histological examination and diagnosis. A cryostat maintains tissue at freezing temperatures to allow sectioning without ice crystal formation. Tissue is mounted on a chuck and placed in the cryostat, then sectioned and mounted on slides for staining. Frozen sections allow rapid diagnosis but have poorer morphology and staining than fixed tissue sections.
This document discusses various tissue fixation methods used in histopathology. Fixation preserves tissues for examination by hardening them and preventing degradation. The ideal fixative kills and penetrates tissue quickly without shrinkage while stabilizing components and enhancing staining. Formalin is commonly used as it fixes most tissues well and is compatible with many stains, though it causes some shrinkage and nucleic acid degradation over time. Other fixatives include Bouin's solution, B-Plus, Zenker's, alcohol and glutaraldehyde. Proper disposal of fixatives and fixed tissues is also important due to their toxic, infectious or hazardous properties.
This document describes the steps involved in tissue processing from fixation to embedding in wax. It discusses obtaining fresh specimens, fixation in formalin, dehydration through an alcohol series, clearing in xylene, infiltration and embedding in paraffin wax. Sections are then cut on a microtome, mounted on slides and stained, usually with hematoxylin and eosin, to visualize tissue structures microscopically. Proper processing is important to preserve tissue morphology and produce high quality stained sections for diagnostic examination.
The document discusses tissue fixation and fixatives. It defines a fixative as a substance that prevents post-mortem changes and preserves the morphological and chemical characteristics of cells and tissues. The aims of fixation include preserving tissues as close to their living state as possible and preventing autolysis and bacterial attack. Common methods of fixation discussed are immersion, perfusion, heat, and vapor fixation. Types of fixatives covered include formaldehyde, alcohols, picric acid, mercuric chloride, and glutaraldehyde. Factors that influence fixation quality like fixation time and temperature are also addressed.
This document provides an overview of tissue fixation. It begins with an introduction to fixation and its importance in histology. The main functions of fixatives are to prevent autolysis and putrefaction of tissue. Various fixation methods and types of fixatives are described, including aldehydes, metallic salts, picric acid, alcohols, chromates, and osmium tetroxide. The document discusses the reactions of fixatives with proteins, nucleic acids, lipids, and carbohydrates. Common fixatives like formaldehyde and glutaraldehyde are compared. Factors affecting fixation and the effects of fixation are also summarized.
This document discusses the process of tissue processing for histological examination. It involves several key steps: specimen identification and labelling, gross examination, fixation, dehydration, clearing, infiltration, embedding, sectioning, and staining. Fixation using formalin or other fixatives preserves tissue structure. Dehydration removes water and replaces it with alcohol or other solvents to allow for infiltration of paraffin wax. The wax infiltrates and impregnates the tissue, allowing it to be sectioned thinly for microscopic examination after staining. The document provides details on common fixation and processing methods and their purposes in preparing tissue for histological analysis.
this is a ppt on histotechniques,, all techniques from receiving samples to block making to sectioning to staining are discusses in detail..useful for postgraduate pathology students and lab technicians
Fixatives are chemicals used to preserve biological tissues from decay. They terminate biochemical reactions and may increase mechanical strength. Fixatives disable enzymes and protect samples from damage. Common fixatives include formaldehyde, glutaraldehyde, osmium tetroxide, alcohols, and picric acid. Fixation aims to inhibit autolysis, preserve tissues, harden them, and improve staining. Factors like temperature, concentration, and duration impact fixation quality. Different tissues require specific fixatives for optimal preservation. An ideal fixative kills cells quickly without damage, penetrates rapidly, prevents decay, hardens tissues, and allows long-term storage.
This document discusses methods for decalcifying bone and teeth for histological examination. It begins with an introduction to decalcification and describes the process of removing calcium ions from bone to make it flexible for pathological investigation. It then classifies common decalcifying agents such as acids, chelating agents, and other solutions. The document discusses factors that affect the rate of decalcification and tests used to determine when decalcification is complete. It provides details on processing and staining decalcified bone and teeth. The document concludes with precautions for decalcification and references.
Hematoxylin and eosin (H&E) staining is the most common histology stain. Hematoxylin stains cell nuclei blue by binding to DNA and RNA, while eosin stains cytoplasm and extracellular components pink. The staining process involves deparaffinizing tissue sections, staining with hematoxylin, differentiating with acid to remove excess stain, staining with eosin, and mounting for examination. Hematoxylin is extracted from logwood and oxidized to hematin, which binds tissue as a cationic dye with a mordant like alum. Eosin Y is the typical counterstain used to visualize cytoplasm. Together, H&E staining provides excellent contrast to study cell and
This document discusses various fixatives used for small biopsy specimens and their applications. It describes the ideal properties of a fixative and the mechanisms of different types of fixatives including aldehydes, mercurials, dichromates, picric acid and alcohol-containing fixatives. For each fixative, the document outlines their composition, principle of action, tissues they are suitable for, fixation time and advantages and disadvantages. It also provides recommendations for fixation of specific tissue biopsies like renal, muscle and liver biopsies. The conclusion emphasizes the importance of using an appropriate fixative to ensure optimal specimen evaluation and diagnosis.
Fixatives used in tissue processing - Histopath techniques.Kaaviya Subramaniam
This document discusses various types of fixatives used to preserve cell and tissue structure. It begins by explaining how living cells require oxygen and nutrients from blood circulation, and will die when cut off from this supply. Fixation is needed to preserve tissues as they were in life for histological examination. Various fixatives are then described, including physical, chemical, simple, compound, dehydrant, coagulant, cross-linking, and osmium tetroxide fixatives. The ideal properties and mechanisms of several common fixatives like formaldehyde, glutaraldehyde, picric acid, acetic acid, and mercuric chloride are also summarized.
FIXATIVES in Pathology for Postgraduate and DMLTjenishJebadurai1
This document discusses various fixatives used in histology and cytology techniques. It begins by defining fixation as the process of preserving cells and tissue using physical or chemical methods. Commonly used fixatives include formaldehyde, glutaraldehyde, osmium tetroxide, mercury salts, picric acid, and alcohols. An ideal fixative would be non-toxic, low-cost, and effectively preserve tissue morphology, antigens, and nucleic acids while allowing for long-term storage. Factors like temperature, pH, concentration, and duration impact fixation quality. Proper fixation is important for minimizing artifacts and ensuring high quality staining.
Fixation is the process of preserving tissues using chemicals called fixatives. This is done to prevent post-mortem changes in tissues and maintain the tissues' morphology. The goal of fixation is to preserve tissues as closely as possible to their in-vivo state. Formalin is commonly used as a fixative due to its ability to penetrate tissues quickly and uniformly while minimizing shrinkage, and allowing most staining protocols. However, formalin fixation can result in artifacts like brown pigments if the fixative is not buffered properly. Other classes of fixatives include alcohols, aldehydes, oxidizing agents, picrates and mercurials. Factors affecting fixation include temperature, tissue size, fixative-to
3 Fixation and fixatives all about the filhooyo7295
This document discusses fixation and fixatives used in histopathology. It defines fixation as a chemical process that preserves tissues from decay by terminating biochemical reactions and increasing stability. The objective of fixation is to preserve cells and tissues in a lifelike state to allow for further processing without change. It then discusses various types of fixatives, how to choose a fixative, fixation methods, and factors that affect fixation quality. Key fixatives mentioned include formaldehyde, glutaraldehyde, mercuric chloride, picric acid, and osmium tetroxide.
This document discusses histopathology and the process of tissue fixation. It defines histopathology as the study of diseased tissues to examine changes in structure from disease. The key steps in tissue fixation are described, including the objectives to preserve tissue structure and prevent decomposition. Various types of fixatives are classified and their mechanisms and properties explained, with examples like formalin, glutaraldehyde, alcohol, picric acid and osmium tetraoxide. Compound fixatives are also mentioned.
The document discusses tissue fixation, which is the first step in preparing tissue for microscopic examination. It aims to prevent decomposition of tissues after removal from the body through chemical and physical processes. This involves using fixatives to preserve tissues in a lifelike state. Several types of fixatives are described including aldehydes, oxidizing agents, and mercurials. The effects of fixation on different cell components and factors affecting fixation are also outlined. A variety of fixatives commonly used in histopathology are then classified and their formulations and uses explained.
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This document provides an overview of histotechniques, specifically tissue fixation. It discusses the goals of fixation including preventing autolysis and bacterial decomposition. Common fixatives like formalin, Bouin's fluid, and Zenker's fluid are described. Formalin is the most widely used fixative and its mechanisms of protein cross-linking and denaturation are explained. Factors that influence fixation like temperature, concentration, and duration are also summarized. Overall, the document provides a comprehensive introduction to the processes and chemicals used in tissue fixation for microscopic examination.
This document provides guidance on grossing techniques for pathology specimens. It discusses proper specimen identification, labeling, collection, fixation and storage. The ideal properties of fixatives are outlined, including preventing autolysis and bacterial growth while maintaining tissue morphology. Common fixatives like neutral buffered formalin are described along with their advantages and limitations. The key steps of gross examination involve describing the location, size, shape and abnormalities seen in specimens before selecting portions for microscopic analysis.
Histology is the microscopic study of tissues. Key steps in processing tissues for histological examination include fixation, dehydration, clearing, embedding in paraffin wax, sectioning, and staining. Tissues are first fixed in chemicals like formaldehyde to preserve their structure. They are then dehydrated using graded alcohols to remove water. Next, tissues are cleared using solvents like xylene to make them permeable to paraffin prior to embedding. The embedded tissues can then be thinly sectioned and stained for microscopic examination. Proper tissue processing is important for high quality histological analysis.
Principles, Methods and Types of FixativesHafsa Hussein
Tissue samples undergo autolysis or microbial degradation after removal from the body. Fixation uses chemicals to preserve tissues by terminating biochemical reactions and maintaining the tissue's shape and size. Effective fixatives prevent autolysis and bacterial growth, allow long-term storage, maintain cell volume, and enable clear staining. Tissues can be fixed through various methods including immersion, coating, vapor, perfusion, freeze-drying, and microwave fixation. Factors like fixation speed and uniformity, impact on antigenicity and staining, and safety risks vary between methods.
The document discusses fixation in histology and cytology. It describes the aims of fixation as preserving tissue structure and preventing autolysis and bacterial growth. Fixation causes some changes like tissue shrinkage and hardening. The types of fixation include immersion, coating, vapor and perfusion. Formalin and alcohol are common fixatives. Factors like pH, temperature, duration and osmolarity influence fixation quality. The choice of fixative depends on the tissue and technique used, for example glutaraldehyde for electron microscopy. Useful fixative formulas are also provided.
Gross Examination, Selection, Collection and Fixation of Specimen ghulam abbas
The document discusses the gross examination, selection, collection and fixation of specimens in pathology. It covers identifying and labeling specimens, performing a gross examination, selecting relevant portions for microscopic examination, and principles of proper fixation. Fixation preserves tissue morphology and prevents autolysis and contamination. Common fixatives include 10% neutral buffered formalin, Bouin's solution, B5, and Zenker's solution. Proper handling and fixation are important for accurate laboratory diagnosis.
1) Fixation is a process that preserves tissues using chemical fixatives to prevent decay. It terminates biochemical reactions and may increase mechanical strength.
2) There are several types of fixatives including cross-linking (e.g. formaldehyde, glutaraldehyde), precipitating (e.g. alcohol, picric acid), and oxidizing (e.g. osmium tetroxide) fixatives. Each works through different mechanisms like cross-linking proteins or denaturing and coagulating them.
3) The quality of fixation is influenced by factors like duration of fixation, size of specimens, temperature, concentration, and pH/buffers to allow for deep and even penetration while preserving tissue
Histotechnology- Receiving and Fixation.pptxsandeep singh
This document provides information on histopathology specimen processing, including fixation. It discusses how specimens are received and labeled in the pathology laboratory. Solid tissues require fixation and processing to preserve their structure for microscopic evaluation, which includes fixation, dehydration, clearing, infiltration, embedding, sectioning, staining and labeling. Fixation is the first and most important step, as it preserves tissues closest to their in vivo state. Common fixatives discussed include formaldehyde, glutaraldehyde, alcohol, picric acid and osmium tetroxide. Key factors that influence fixation, such as temperature, pH, concentration and duration, are also outlined.
Histological Techniques: Section 2:Fixation of tissuesMathew Joseph
Fixation is the process of preserving tissues and cells for examination by preventing autolysis and putrefaction. It aims to preserve tissues in a lifelike state as possible while allowing staining and sectioning. Formalin is the most common fixative due to its ability to crosslink proteins through methylene bridges and preserve morphology. Glutaraldehyde provides better ultrastructural preservation but is more expensive. Different fixatives are used depending on the goals, with alcohols and picric acid used for cytology and chromic acid and osmium tetroxide used for electron microscopy due to their effects on specific structures.
This document discusses the history and techniques of immunohistochemistry. It covers:
- The early development of immunohistochemistry from 1941 to the present.
- Common fixatives used such as formalin, Bouin's solution, B5, Zenker's solution, and modifications like PLDP.
- The benefits and drawbacks of different fixatives for preserving tissue morphology and antigenicity.
- Methods for improving antigen retrieval after fixation, like proteolytic enzymes and heat.
- The importance of fixation for maintaining tissue structure while not blocking epitopes.
Notes for Fixation of tissues and organs for educational and scientific purposesimprovemed
Fixation of tissues and organs is done to preserve them for scientific and educational purposes. Various chemical fixatives are used including formaldehyde, alcohols, and acids. Formaldehyde cross-links proteins to harden the tissue while maintaining the original structure. Several fixation protocols are used for different purposes, balancing preservation of color and long-term durability. Key steps include diffusion or injection of fixatives, followed by storage in preservative solutions. Proper fixation and storage are necessary to prevent degradation over time.
1. Fixatives are classified as dehydrating and coagulating or cross-linking based on their mechanisms of fixation. Ethanol and methanol are dehydrating fixatives while formaldehyde, glutaraldehyde and osmium tetroxide are cross-linking.
2. Ethanol and methanol remove water from tissues causing protein destabilization. Formaldehyde forms methylene bridges between reactive protein atoms, glutaraldehyde cross-links proteins via its two aldehyde groups, and osmium tetroxide oxidizes lipid unsaturated bonds.
3. Important parameters for fixation include concentration, pH, temperature, duration and agitation to optimize penetration and preservation while avoiding artifacts. Buffers
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1. FIXATION AND PROCESSING
OF TISSUE SPECIMEN
Dr. Atreyee Chakrabarty
Junior Resident-1 (MD Pathology)
Institute of Medical Sciences, Banaras Hindu University
Moderators: Dr Bitan Naik and Dr Vishal Kumar
3. WHAT IS FIXATION?
Process - cells and tissues are fixed in a physical
and chemical state
Prevents biochemical or proteolytic activities in
the cell.
Resist morphological change or distortion or
decomposition
Fixation maintains the original microscopic
relationship between cells, cellular components
and the extracellular material
4. WHY DO WE NEED TO FIX A
TISSUE?
Autolysis is the postmortem degeneration of cells
with release of their contents into the interstitial
space, where they may provoke inflammation
Putrefaction - decomposition of cells by bacteria
and other organisms that invade the tissue, to release
by products.
5. AIMS OF FIXATION
To preserve the tissue in the state nearest to its
original living state
To prevent any change in shape or size of the
tissue at the time of processing
To prevent autolysis
To prevent bacterial growth
To have a clear stain
To have better optical quality of the cells.
6. IDEAL FIXATIVE
Should maintain the original
shape and size and recovery
of macromolecules
Should be usable for a wide
variety of tissue types
Should prevent autolysis and
prevent bacterial
decomposition
Should provide a consistently
high quality stain
Should penetrate
tissues rapidly
Should have a good
shelf life
Should be disposable
and recyclable, cost
effective.
Should have good
toxicological and
flammability profile
to permit safe use.
7. Till date, an ideal fixative has not been identified.
So we choose a fixative based on requirement.
Histopathology:10% neutral buffered formalin
Cytology:95% ethyl alcohol.
8. CHANGES IN A TISSUE DURING
FIXATION
1. Volume changes
2. Tissue hardening
3. Interference with staining
4. Change in optical density
9. VOLUME CHANGES
Fixatives - swelling or shrinkage
Formaldehyde causes 30% reduction in volume.
Bahr et al. noted that:
Formaldehyde
concentration
Degree of tissue shrinkage
1
10. Glutaraldehyde also causes shrinkage. But with
osmium tetroxide, 70% increase in cell size.
Osmium tetroxide causes cellular swelling by
three mechanisms:
1. Altered membrane permeability
2. Inhibition of the respiratory enzymes
3. Change in Na+ ion transport
12. INTERFERENCE WITH STAINING
Fixation may cause hindrance to staining.
Osmium tetroxide inhibits hematoxylin and eosin
staining.
Hence, after staining with H and E in osmium
tetroxide fixed tissues, poor tissue differentiation
and staining artefacts are seen.
13. CHANGE IN OPTICAL DENSITY
Change in optical density of the nuclei - nuclei may
appear condensed and hyperchromatic.
14. TYPES OF FIXATIVES
Types of
fixatives
Physical
Heat fixation
Microwave
fixation
Freeze drying
and freeze
substitution
Chemical
Coagulative Cross linking
16. HEAT FIXATION
Simplest form of fixation
Adequate morphology can be obtained by
boiling the tissue in normal saline
Used to accelerate the other forms of
fixation as well as the other steps of
tissue processing.
17. MICROWAVE FIXATION
Microwaving reduces the
time of fixation.
Microwave generates
electromagnetic field
Dipolar molecules like
water oscillate rapidly
Kinetic energy
Heat generation
Uniform increase in
temperature of the tissue
18. However, microwaving tissue in formalin can
produce toxic and potentially explosive vapours.
Solutions to prevent this:
1. Hood for extraction of these vapours
2. Using commercial glycol based fixatives at 55°C
19. FREEZE DRYING
The
tissue is
cut into
thin
sections
Immersed
in a liquid
coolant at
-160 °C.
The
tissue is
placed in
the
vacuum
chamber
at -30 to
-50 °C.
The
tissue is
gradually
warmed
to 4 °C
Embedded
20. FREEZE SUBSTITUTION
Similar to freeze drying
Specimen is immersed in a liquid fixative like
acetone at -40°C
Used in research environment, rarely used in
clinical laboratory settings.
22. COAGULANT FIXATIVES
Cellular architecture in vivo is primarily
maintained by lipoproteins and fibrous proteins
such as collagen.
So, coagulating these proteins maintains tissue
histomorphology at light microscopic level.
23. Coagulant fixatives result in cytoplasmic
flocculation and poor preservation of
mitochondria and secretory granules.
So, it is not used in ultrastructural analysis.
COAGULANT
FIXATIVES
DEHYDRATING OTHER TYPES
24. DEHYDRATING COAGULANT
FIXATIVES
Methanol, ethanol and acetone.
Act by destabilizing the hydrophilic and
hydrophobic interactions within the proteins.
Together, these changes disrupt the tertiary
structure of the proteins.
This changes their physical properties and
causes loss of function.
25. Denaturation of proteins by alcohol depends on:
1. Choice and concentration of alcohol
2. Presence of organic and inorganic substances
3. pH of fixation
4. Temperature of fixation
Protein denaturing effect of different
coagulant fixatives:
Ethanol>Phenol>Water and polyhydric
alcohol>monocarboxylic acid>dicarboxylic acid
26. OTHER TYPES OF COAGULANT
FIXATIVES
Acetic acid, Trichloroacetic acid and Picric acid.
Charges on the ionisable side chains are changed
using acid coagulants by disrupting the
electrostatic and hydrogen bonding.
These acids can also insert a lipophilic anion into a
hydrophilic region and disrupt the tertiary
structure of proteins.
27. ACETIC ACID TRICHLOROACETIC
ACID
PICRIC ACID
It coagulates the
nucleic acids but does
not fix or precipitate
proteins. So, it is used
with other fixatives to
prevent loss of nucleic
acids.
Penetrates the
hydrophobic domains
of proteins and the
anion produced reacts
with charged amine
groups.
This reaction
precipitates the
proteins and extracts
the nucleic acid.
Picric acid fixation
produces brighter
staining but low pH
solution may cause
hydrolysis and loss of
nucleic acids.
28. CROSS LINKING FIXATIVES
Also known as “covalent additive fixatives”
They form cross links within and between proteins
and nucleic acids
Examples:
1. Formaldehyde
2. Glutaraldehyde
3. Other aldehydes like chloral hydrate and glyoxal
4. Metal salts like mercuric and zinc chloride
5. Metallic compounds such as osmium tetroxide
30. BUFFER AND PH
- Effect depends on application of formalin
- In strongly acidic environment, formalin may affect
protein structure and forms formalin pigment.
- Common buffers include phosphate and bicarbonate.
- Unbuffered formalin is better than neutral buffered
formalin for immunorecognition of antigens.
- In most cases, neutral buffered formalin is preferred.
31. DURATION OF FIXATION AND SIZE
OF SPECIMEN
The duration of fixation is given by the following
formula:
d = k √t
d=depth needed to reach by a fixative (in mm)
k=Constant of diffusibility, fixative specific
t= time taken (in hours)
Formalin penetrates at the rate of 1 mm/hr
Rapid fixation is acceptable as long as histochemical
staining remains adequate.
32. TEMPERATURE OF FIXATION
The diffusion of molecules increases with rising
temperature due to their more rapid movement
and vibration.
The rate of penetration of a tissue by
formaldehyde is faster at higher temperatures.
33. CONCENTRATION OF FIXATIVE
Concentrations of formalin above 10% tend to
cause increased tissue hardening.
Ethanol concentrations below 70% do not remove
free water from tissues efficiently.
34. OSMOLALITY OF FIXATIVES AND
IONIC COMPOSITION
Hypertonic and hypotonic solutions lead to
shrinkage and swelling, respectively.
The best morphological results are obtained with
solutions that are slightly hypertonic (400–450
mOsm),
However, osmolality for 10% NBF is about 1500
mOsm.
Similarly, various ions (Na+, K+, Ca2+, Mg2+) can
affect cell shape and structure regardless of the
osmotic effect.
35. FORMALDEHYDE
- Most commonly used fixative
- Pure formaldehyde is a vapour
- Formalin= Aqueous solution of formaldehyde
- Formalin contains 37-40% formaldehyde
- Commonly used: 10% solution of formalin- contains
4% weight to volume of formaldehyde.
36. MECHANISM OF ACTION OF FORMALIN
Once these bridges have
formed, formalin cannot be
removed from the tissue by
simple washing.
37. ADVANTAGES:
1. High penetration rate
2. Cell morphology is preserved well in formalin
3. Solution is easy to make
4. Inexpensive
DISADVANTAGES:
1. Slow fixation
2. Fails to preserve acid mucopolysaccharides
3. Can form artefacts
4. Can affect skin causing dermatitis and chronic
inhalation can cause bronchitis.
38. DIFFERENT SOLUTIONS OF
FORMALIN
Neutral buffered formalin: Most commonly used
Carson’s modified Millonig’s phosphate buffered
formalin: better at ultrastructural preservation than
neutral buffered formalin
Formalin calcium acetate: good for preservation of
lipids
Formal (10% formalin) buffered saline
Formal (10% formalin) zinc, unbuffered: Excellent for
immunohistochemistry
Tap water 900 ml
Formaldehyde
(37%)
100 ml
Sodium
phosphate,
monobasic
monohydrate
4 g
Sodium
phosphate,
dibasic,
anhydrous
6.5 g
COMPOSITION OF 10%
NEUTRAL BUFFERED
FORMALIN
39. MERCURIC FIXATIVES
Zenker’s solution: Good fixative for bloody specimens
and trichrome stains
Helly’s solution: Excellent for bone marrow
extramedullary hematopoiesis and intercalated discs.
Schnaudinn’s solution
Ohlmacher’s solution
Carnoy Lebraun solution
B5 fixative: Frequently used for bone marrow, lymph
nodes, spleen and other hematopoietic tissues
41. PICRIC ACID FIXATIVES
1. Bouin’s solution: fixation of lymph nodes, prostate
and kidney biopsies.
2. Hollande’s solution: useful for GI biopsies and
endocrine tissues.
42. OTHER DEHYDRANT FIXATIVES
1. Clarke’s solution
2. Carnoy’s fixative:
useful for RNA stains and glycogen preservation.
may destroy staining of acid fast bacilli.
Also useful in cytology to clear heavily blood
stained specimens.
3. Methacarn’s fixative:
Causes less shrinking and less hardening than
Carnoy, but pattern of staining is the same.
44. FIXATIVES IN CYTOLOGY
Rapid fixation of smears- to preserve cytological
details of cells spread on a glass slide.
Marked cellular distortion if smears are air dried
before fixation.
Previous fixative of choice: Ether and 95% ethanol
Current fixative of choice: 95% ethanol
45. Smears should be kept in this solution for 15 mins
prior to staining.
EQUIVALENT CONCENTRATIONS OF SEVERAL
ALCOHOLS FOR PURPOSES OF CELL FIXATION:
1. 100% Methanol
2. 95% Ethanol
3. 95% Denatured alcohol
4. 80% Propanol
5. 80% Isopropanol
46. COATING FIXATION
Can be sprayed or applied with a dropper to freshly
prepared smears,
Eliminates the use of bottles and fixing solutions.
Have a dual action: fix the cells and form a thin,
protective coating over the smear.
Not recommended for smears prepared from fluids
within the laboratory.
47. Should be applied immediately to fresh smears.
Danos-Holmquist tested several spray fixatives
and found that the distance of 10-12 inches
between the nozzle and the smear was optimal.
Two commonly used spraying fixatives are:
1. Polyethylene glycol
2. Diaphane fixative
48. PERFUSION FIXATION
Mainly used for research purposes
The fixative solution is infused in the arterial
system of the animal and the whole animal is
fixed.
Some organs like brain and spinal cord can also be
fixed by perfusion fixation
49.
50.
51. PRECAUTIONS TO BE TAKEN FOR
PROPER FIXATION
Gross specimens should not rest on the bottom of the
container of a fixative.
Should be separated from the bottom by a wadded
fixative soaked paper or cloth to allow penetration of
the fixative from all directions.
Unfixed gross specimens which are to be cut and stored
in fixative prior to processing should not be thicker than
5 mm.
52. Gross specimens kept in blood or bloody fluids
should be thoroughly washed with saline before
putting into the fixative.
The fixative volume should be at least 10 times
the volume of the tissue specimen for rapid
fixation.
56. WHAT IS PROCESSING?
Next step after fixation
Poor processing of tissue may affect section
cutting and staining.
To provide sufficient rigidity to the tissue
Allows tissues to be cut into thin sections for
microscopic examination
58. VISCOSITY AGITATION HEAT VACCUM AND
PRESSURE
PROCESSING
SOLVENT
CONTAMINATI
ON
Low viscosity-
smaller sized
molecules and
faster penetration
rate.
-Increases the
flow of solutions
around the tissue.
-Mechanism is
vertical or
rotatory
oscilation or
pressurized
removal and
replacement of
fluids at time
intervals.
-Improves the
fluid exchange
and penetration
rate
-Ensure that there
are no heat
artefacts or
shrinkage or
hardening of the
tissue
Increase fluid
mobility,
infiltration rate
and decreases
time for each
step
-Vaccum aids the
removal of air
pockets in porous
tissue eg: lung
The number of
blocks on each
run, tissue type,
size, frequency of
the runs, use of
sponges and cross
contamination of
processor solvents
will influence how
often solutions
should be rotated
or changed to
maintain
processing
contamination
59. STAGES OF TISSUE PROCESSING
DEHYDRATION: Removes water and unbound fixative from
the tissue
CLEARING: Displaces dehydrating solutions, making the
tissue components receptive to the infiltrating medium
INFILTRATION: Permeates tissue with a support medium
EMBEDDING: Orientation of the tissue sample in a support
medium to create a tissue block suitable for sectioning
60. POST FIXATION TREATMENT
Specimens fixed in alcohol fixatives should be
followed with alcohol to prevent reintroduction of
water into the tissue specimen.
The alcohol concentration will depend on the alcohol
concentration of the fixative.
Picric acid fixatives will colour the tissue bright
yellow. So the tissue should be rinsed in 50% alcohol
for 4-6 hours to remove the excess fixative.
61. DEHYDRATION
Dehydration displaces the residual fixative as well
as the cellular water.
Water is available in two forms: bound and free.
The bound water is part of the integral
macromolecules.
Graded alcohols are used to remove the free
water
Exposure to heat or higher grade alcohols (95-
100%) removes the bound water.
62. OVER DEHYDRATION: Produces “parched earth
effect” during microtomy.
INCOMPLETE DEHYDRATION: Impairs the
penetration of clearing agents into the tissue and
leave the specimen soft and non receptive to
paraffin wax infiltration.
COMMONLY USED REAGENTS:
1. Ethanol
2. Isopropanol
3. Glycol ether dehydrants
63. CLEARING
To remove the dehydrating agent itself from the
tissue
Many dehydrating agents are not miscible with the
impregnating material (paraffin wax).
Clearing agents also make the tissue clear and
improve the microscopic examination
64. Must be miscible with both the dehydrants and
paraffin wax.
This ensures complete impregnation
Selection of an appropriate clearing agent
depends on:
a. Type of tissue and processor
b. Processing conditions such as heat and vaccum
c. Safety factors and cost.
65. VOLUME OF THE CLEARING AGENT: It should be
40 times the volume of the specimen.
TOTAL DURATION OF CLEARING: 1 hour for
smaller tissues and three changes in toluene for
60 mins each in case of larger tissues
END POINT DETECTION: The tissue will look
transparent
COMMONLY USED CLEARING AGENTS:
1. Xylene: most common
2. Toluene
3. Amyl nitrate
4. Cedarwood oil
66. IDEAL CLEARING AGENT
1. Low viscosity and high penetration rate
2. Low melting point
3. Miscible with both alcohol and molten wax
4. No tissue damage
5. Less toxic and inflammable
6. Inexpensive
67. XYLENE
It is an excellent lipid solvent.
It removes water from the tissues. So, tissues may
become hard and brittle.
Small pieces of tissue are rapidly cleared within
60 mins.
However, xylene is inflammable and irritant but
less toxic than chloroform
It is inexpensive.
68. TOLUENE CHLOROFORM ESTERS CEDARWOOD
OIL
LIMONENE
-Similar to xylene
-Does not make
the tissue hard
after prolonged
exposure
-Action is slightly
slower than
xylene
-Flammable and
toxic
-Slower
penetrating
power than
xylene
-Highly volatile,
inflammable and
toxic
-No tissue
shrinkage
-Rarely used now
-Different esters
include amyl
nitrate, methyl
salicylate and
methyl benzoate
-Less toxic, may
be used in manual
processing
-Donot cause
tissue hardening
even after
prolonged
exposure
-Rapid clearing
agent
-Used mainly for
dense tissues
-Clear liquid with
characteristic
“citrus odour”
-No tissue
hardening
-Difficult to
remove from
tissue by paraffin
wax
-Skin sensitizer
and irritant
69. INFILTRATION
This is the next step after clearing.
After removing the clearing agent by diffusion,
the tissue space is infiltrated with the embedding
media.
Most commonly used: molten wax.
70. IDEAL IMPREGNATING MEDIUM
1. Miscible with clearing agent
2. Liquid at higher temperature and solid in room
temperature
3. Homogenous and stable
4. Non toxic and cheap
5. Transparent
6. Fit for tissue sectioning
71. PARAFFIN WAX
It is a type of hydrocarbon produced as a by
product while refining crude petroleum.
Most popular universally accepted infiltrating
agent and embedding medium for tissue
processing.
Non toxic and inexpensive
Melting point varies between 39°C to 70°C
72. In the Indian subcontinent, paraffin wax with a
melting point of around 50-60 °C is most suitable
for laboratory use.
Tissue blocks made in paraffin can be stored for a
long duration
Causes tissue shrinkage and hardening if
impregnated for too long.
73. Occasions where paraffin wax becomes an
unsuitable media:
1. Processing reagents remove or destroy the tissue
components which are the object of investigation
eg: Lipids
2. When the use of heat may have an adverse effect
on a tissue component eg: enzymes
3. Sections are required to be thinner eg: electron
microscopy
4. Infiltrating media is not sufficiently hard to
support the tissue. Eg: Undecalcified bone
74. RESIN: AGAR: GELATIN CELLOIDIN
Exclusively used for
electron
microscopy, ultra
thin sectioning and
undecalcified bone.
Mainly used as a
cohesive agent for
small, friable tissue
after fixation
(=double
embedding)
-Primarily used for
sectioning of whole
organs
-Used along with
agar as a
preembedded
media and in frozen
sectioning
-Used when
processing dense
and/or hard tissues.
-Use requires
special equipment
and non
conventional
microtomy
techniques.
-Not suitable for
clinical histological
laboratories
75. EMBEDDING(BLOCKING)
This is the process of creating tissue blocks by
using external support medium to enable
microtomy.
The embedding media should be compatible with
the infiltrating media to prevent tissue section
separation and to facilitate sectioning.
Embedding can be done using paraffin wax or
resins.
76. PARAFFIN WAX EMBEDDING
Most laboratories use modular embedding centres
consisting of a paraffin wax dispenser, cold plate
and heated storage area for molds and processed
tissue cassettes.
77. Paraffin
wax is
dispensed
from
nozzle
into a
warm
mold of
suitable
size
Tissue is
oriented
in the
mold
Tissue is
fixed in
the
bottom
Casette is
placed on
top of the
mold and
filled with
wax
Final
block is
placed on
the cold
plate
Allowed
to solidify
78. TISSUE ORIENTATION
The ability to see the desired tissue morphology is
based on the orientation of the sample in the
block.
INCORRECT ORIENTATION: Damages diagnostic
tissue elements during microtomy or obscure
them from microscopic view, preventing correct
diagnosis.
79. TISSUE PROCESSORS
Tissue processing can be done manually or by
automated processors.
Manual tissue processing is now done only in small
laboratories.
Mostly automated tissue processors are currently
in use.
Automated tissue processors are of two types:
1. Tissue transfer processor
2. Fluid transfer processor
80. MANUAL TISSUE PROCESSOR
It is rarely used. The advantages are:
1. Small number of samples can be processed.
2. Careful monitoring in each step is possible.
3. Used in case of emergencies or in low resource
settings
4. It is possible to select the reagents of choice with
flexibility in time duration.
81. TISSUE TRANSFER PROCESSOR
Tissues in 30-
100 cassette
in a basket
Different
reagents are
put in
containers
called
carousels
Basket is
submerged in
each carousel
for a specific
time with
gentle
agitation in
each carousel
Basket lifted
up once time
in that
particular
reagent is
complete
Basket
shifted
automatically
to next
carousel
83. After grossing, sections are
taken and placed in this
cassette.
Volume of each cassette is 2
cc.
No of casettes in each
processor at a time:
Sakura: 28
Leica: 54
84. XYLENE: Kept for 4-6 hours
PARAFFIN WAX:
Kept for 4-6.5
hours
GRADED
ALCOHOL:
Kept for
1.5-2 hours
in each
carousels
TOTAL TIMING:
Ideally 24 hours
but for faster
processing due to
specimen
burden, we keep
it for 16-18
hours.
87. FLUID TRANSFER PROCESSOR
- Completely closed processor.
- In this processor, each step can be customized for
vaccum, temperature and time duration.
Tissue is kept
in container
Container
periodically
filled with
reagent for
first step
Time for
reagent
complete
Fluid
pumped out
of container
Container
filled with
reagent for
the next step
88. MICROWAVE PROCESSING
Instantaneous heat generation: reduces
processing time
Heat artifacts can easily be avoided.
These days “continuous input rapid tissue
processors” are in use, which employ microwave
technology, vaccum infiltration and proprietary
reagents.
89. FUTURE OF FIXATION AND TISSUE
PROCESSING
In future, there may be environmental friendly
fixatives and fixatives that are more
compatible with molecular techniques and high
resolution microscopy.
Currently there is ongoing research about
automation of the process of fixation and
integration with genomics.
Future tissue processing methods may aim to
better preserve molecular information,
including DNA, RNA, and proteins.