2. Background
ā¢ Specimen accession
ā Tissue specimens received has request
form that lists patients information,
history along with a description of the
site of origin
ā Specimens are accessioned by giving
them a unique number by which they
will be identified .
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3. Background
3
ā¢ Gross examination
ā Tissue are examined by a pathologist, pathologist assistant or
resident.
ā Involves describing the specimen and placing all or parts of it
into a small plastic cassette which holds the tissue for
subsequent processes.
6. Background
ā¢ When a tumour is suspected, then the specimen is often marked
with ink in order to mark the margins of the specimen.
ā¢ Different colour inks can be use to identify different areas.
ā¢ The macroscopic description is usually dictated for subsequent
secretarial transcription, or occasionally can be simply written
down for typing later.
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10. Fixation
ā¢ Tissue block is taken by biopsy,
surgical excision or postmortem
ā¢ Fixation is a chemical process by
which biological tissues are preserved
from decay, either through autolysis
or putrefaction.
ā¢ Fixation terminates any ongoing
biochemical reactions, and may also
increases the mechanical strength or
stability of the treated tissues
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11. Purpose of Fixation
ā¢ To preserve a sample of biological material (tissue or cells) as
close to its natural state as possible in the process of preparing
tissue for examination.
ā¢ To prevent postmortem changes like autolysis and putrefaction
ā¢ Preservation of chemical compounds and microanatomic
constituents so that further histochemistry is possible
ā¢ Harden the tissues, as fixation causes coagulation of proteins.
ā¢ Fixation has a mordanting effect, facilitating subsequent
staining of tissues
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12. Classification of Fixatives:-
ā¢ Physical fixatives
ā Heat
ā Microwaving
ā Freeze-drying and substitutes
ā¢ Chemical fixatives
** General classification; Heat, Perfusion and immersion
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15. Mechanism of action of fixatives
ā¢ Based on their mode of action fixatives can be classified
as;
ā Cross-linking fixatives: Aldehydes
ā Oxidising agents
ā Coagulant/Precipitating fixatives (denaturing)
ā Other fixatives
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16. Coagulant/Precipitating fixatives (1)
ā¢ Coagulating of macromolecules such as lipoproteins,
fibrous proteins (collagen) to maintain tissue
morphology.
ā¢ It act by reducing the solubility of protein molecules and
by disrupting the hydrophobic interactions which give
many proteins their tertiary structure
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17. ā¢ Protein primary structure intact. Alters secondary and tertiary
structures
ā¢ Hydrophilic/phobic inversion often irretrievably, with loss of up
to 40% of protein.
ā¢ The most commonly used precipitating fixatives are ethanol,
methanol and acetone
ā¢ Other types of coagulant fixatives include picric acid and
trichloroacetic acid
ā¢ Acetic acid coagulates nucleic acids but not proteins.
ā Used as additive to prevent nucleic acid loss
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Coagulant/Precipitating fixatives (2)
18. ā¢ Picric acid dissolves in water to form weak acid
solution. It forms salt with basic groups of protein,
causing the proteins to coagulate
ā¢ Picric acid give brighter staining but may cause
hydrolysis and loss of nucleic acids in low pH
solutions
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Coagulant/Precipitating fixatives (3)
19. Formulations of Picric acid fixatives
ā¢ Bouinās solution: excellent general fixative for connective
tissue stains and fatty tissues
ā¢ Hollandeās solution: Useful of GIT biopsies and
endocrine tissue
ā¢ Rossmanās and Gendreās fluid
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20. Formulations of dehydrant coagulant fixatives
ā¢ Absolute Ethanol and 70ā95% Ethanol
ā¢ 100% Methanol
ā¢ 100% Acetone
ā¢ Clarke's solution
ā It give good nuclear detail but loss of lipids
ā¢ Carnoy's fixative: Useful for RNA stains
ā It shrinks and hardens tissue, useful in cytology to lyse red blood
cells
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21. Pitfalls of Coagulant fixatives
ā¢ Not useful for ultrastructural analysis as it causes
cytoplasmic clumping and poor preservation of
mitochondria and secretory granules.
ā¢ The alcohols are known to cause shrinkage of tissue
during fixation.
ā¢ Acetic acid alone is associated with tissue swelling;
combining the two may result in better preservation of
tissue morphology.
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22. Cross-linking fixatives
ā¢ Mode of action: they act by creating covalent chemical
bonds between proteins in tissue
ā¢ This anchors soluble proteins to the cytoskeleton, and
lends additional rigidity to the tissue
ā¢ Examples: formaldehyde, glutaraldehyde,
ā¢ Others; metal salts such as mercuric and zinc chloride,
osmium tetroxide
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23. Formaldehyde fixation (1)
ā¢ Pure formaldehyde is a gas, dissolve in water to form a solution
containing 37-40% formaldehyde (formalin)
ā Commonly used : 10% neutral buffered formalin
ā¢ Protein secondary structure intact. Only modifies tertiary and
quaternary structures.
ā¢ Methylene bridge cross-links and mostly (90%) retrievable, with
little loss (<1%) of protein.
ā¢ Cannizzaro reaction??
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26. Formaldehyde fixation (2)
ā¢ Paraformaldehyde is a polymerized form of formaldehyde,
usually obtained as a fine white powder, which depolymerizes
back to formalin when heated
ā¢ Formalin penetrate tissue well but relatively slow.
ā¢ Oxidation of formaldehyde results in an acid solution (formic
acid)
ā¢ Acid formalin leads to the formation of brown-black pigment
with degraded haemoglobin.
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28. Formulations of formaldehyde
ā¢ Neutral buffered 10% formalin
ā¢ Formal (10% formalin) saline
ā¢ Formal (10% formalin) zinc unbuffered
ā¢ Formal (10% formalin), calcium acetate
ā Good fixative for preservation of lipids
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29. Glutaraldehyde fixation (1)
ā¢ It does not penetrate thicker tissue specimens as
effectively as formaldehyde. Thus small blocks of tissue
is required.
ā¢ It may offer a more rigid or tightly linked fixed.
ā¢ It results in better preservation of ultrastructure but the
rate of penetration is slow.
ā¢ Suitable for electron microscopy
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30. ā¢ It causes rapid and irreversible changes, fixes
quickly gives best overall cytoplasmic and nuclear
detail.
ā¢ Some fixation protocols call for a combination of
formaldehyde and glutaraldehyde, so that their
respective strengths complement one another.
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Glutaraldehyde fixation (2)
31. Oxidising fixatives (1)
ā¢ Oxidizing agents include permanganate fixatives
(potassium permanganate), dichromate fixatives
(potassium dichromate), and osmium tetroxide.
ā¢ They cause extensive denaturation despite preserving
fine cell structure and are used mainly as secondary
fixatives.
ā¢ Osmium tetroxide is often used as a secondary fixative
when samples are prepared for electron microscopy.
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32. Oxidising fixatives (2)
ā¢ Large proportions of proteins and carbohydrates are lost
from tissues during osmium fixation due slow
penetration and reaction rates.
ā¢ Can be used to stain lipids in frozen sections
ā¢ Osmium tetroxide fixation however causes tissue
swelling which is reversed during dehydration steps.
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33. Mercuric fixatives
ā¢ Mercurials fix tissue by an unknown mechanism.
ā¢ These fixatives penetrate relatively poorly and cause
some tissue hardness, but are fast and give excellent
nuclear detail
ā¢ Mercuric pigments removed by iodine solution followed
by sodium thiosulphate
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34. Formulations of Mercuric fixatives
ā¢ They contain mercuric chloride and include such well-
known fixatives as B-5, Zenker's and Helly solution
ā¢ Their best application is for fixation of bone marrow,
lymph nodes , spleen and other hematopoietic tissues
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35. Characteristics of an ideal fixatives (1)
ā¢ Avoid excessive hardness of tissue
ā¢ Allows enhanced staining of tissue
ā¢ Should have good toxicological and flammability profiles
to permit safe use
ā¢ It should penetrate and fix tissues rapidly
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36. Characteristics of an ideal fixatives (2)
ā¢ Should be cost-effective
ā¢ It must also permit the recovery of macromolecules
including proteins, mRNA and DNA without any
extensive modifications
ā¢ It should allow tissue to be stored for long time
ā¢ It must kill the cell quickly without shrinkage or
swelling
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37. Factors affecting the quality of fixation (1)
ā¢ Buffers and pH
ā¢ Duration of fixation and size of specimens
Ć¼ Medawar, (1941) established that fixatives obey the
diffusion laws. That is, the depth penetrated is
proportional to the square root of time. Each fixative
has a unique coefficient of diffusibility, designated K.
Penetration rate may be determined from the
formula;
d = K x āt
Where d = depth in mm, K = the Medawar coefficient
āt = the square root of fixation time in hours.
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38. Ć¼ constituents of compound fixatives will penetrate tissue
at different rates
Ć¼ The fixative volume should be at least 10-20 times the
volume of tissue specimen
Ć¼ Gross specimens, bloody/body fluid and unfixed gross
specimens??
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Factors affecting the quality of fixation (2)