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FIXATION AND FIXATIVES
E. Adankwah, Ph.D
1
Background
ā€¢ Specimen accession
ā€“ Tissue specimens received has request
form that lists patients information,
history along with a description of the
site of origin
ā€“ Specimens are accessioned by giving
them a unique number by which they
will be identified .
2
Background
3
ā€¢ Gross examination
ā€“ Tissue are examined by a pathologist, pathologist assistant or
resident.
ā€“ Involves describing the specimen and placing all or parts of it
into a small plastic cassette which holds the tissue for
subsequent processes.
Background
4
Grossing tools
Cassettes
Background
5
Background
ā€¢ When a tumour is suspected, then the specimen is often marked
with ink in order to mark the margins of the specimen.
ā€¢ Different colour inks can be use to identify different areas.
ā€¢ The macroscopic description is usually dictated for subsequent
secretarial transcription, or occasionally can be simply written
down for typing later.
6
7
8
Stages of tissue processing
Grossing
Surgical
9
Fixation
ā€¢ Tissue block is taken by biopsy,
surgical excision or postmortem
ā€¢ Fixation is a chemical process by
which biological tissues are preserved
from decay, either through autolysis
or putrefaction.
ā€¢ Fixation terminates any ongoing
biochemical reactions, and may also
increases the mechanical strength or
stability of the treated tissues
10
Purpose of Fixation
ā€¢ To preserve a sample of biological material (tissue or cells) as
close to its natural state as possible in the process of preparing
tissue for examination.
ā€¢ To prevent postmortem changes like autolysis and putrefaction
ā€¢ Preservation of chemical compounds and microanatomic
constituents so that further histochemistry is possible
ā€¢ Harden the tissues, as fixation causes coagulation of proteins.
ā€¢ Fixation has a mordanting effect, facilitating subsequent
staining of tissues
11
Classification of Fixatives:-
ā€¢ Physical fixatives
ā€“ Heat
ā€“ Microwaving
ā€“ Freeze-drying and substitutes
ā€¢ Chemical fixatives
** General classification; Heat, Perfusion and immersion
12
13
Heat
Immersion
Perfusion
Formal Calcium
Alcoholic formalin
Heidenhain Susa
14
Mechanism of action of fixatives
ā€¢ Based on their mode of action fixatives can be classified
as;
ā€“ Cross-linking fixatives: Aldehydes
ā€“ Oxidising agents
ā€“ Coagulant/Precipitating fixatives (denaturing)
ā€“ Other fixatives
15
Coagulant/Precipitating fixatives (1)
ā€¢ Coagulating of macromolecules such as lipoproteins,
fibrous proteins (collagen) to maintain tissue
morphology.
ā€¢ It act by reducing the solubility of protein molecules and
by disrupting the hydrophobic interactions which give
many proteins their tertiary structure
16
ā€¢ Protein primary structure intact. Alters secondary and tertiary
structures
ā€¢ Hydrophilic/phobic inversion often irretrievably, with loss of up
to 40% of protein.
ā€¢ The most commonly used precipitating fixatives are ethanol,
methanol and acetone
ā€¢ Other types of coagulant fixatives include picric acid and
trichloroacetic acid
ā€¢ Acetic acid coagulates nucleic acids but not proteins.
ā€“ Used as additive to prevent nucleic acid loss
17
Coagulant/Precipitating fixatives (2)
ā€¢ Picric acid dissolves in water to form weak acid
solution. It forms salt with basic groups of protein,
causing the proteins to coagulate
ā€¢ Picric acid give brighter staining but may cause
hydrolysis and loss of nucleic acids in low pH
solutions
18
Coagulant/Precipitating fixatives (3)
Formulations of Picric acid fixatives
ā€¢ Bouinā€™s solution: excellent general fixative for connective
tissue stains and fatty tissues
ā€¢ Hollandeā€™s solution: Useful of GIT biopsies and
endocrine tissue
ā€¢ Rossmanā€™s and Gendreā€™s fluid
19
Formulations of dehydrant coagulant fixatives
ā€¢ Absolute Ethanol and 70ā€“95% Ethanol
ā€¢ 100% Methanol
ā€¢ 100% Acetone
ā€¢ Clarke's solution
ā€“ It give good nuclear detail but loss of lipids
ā€¢ Carnoy's fixative: Useful for RNA stains
ā€“ It shrinks and hardens tissue, useful in cytology to lyse red blood
cells
20
Pitfalls of Coagulant fixatives
ā€¢ Not useful for ultrastructural analysis as it causes
cytoplasmic clumping and poor preservation of
mitochondria and secretory granules.
ā€¢ The alcohols are known to cause shrinkage of tissue
during fixation.
ā€¢ Acetic acid alone is associated with tissue swelling;
combining the two may result in better preservation of
tissue morphology.
21
Cross-linking fixatives
ā€¢ Mode of action: they act by creating covalent chemical
bonds between proteins in tissue
ā€¢ This anchors soluble proteins to the cytoskeleton, and
lends additional rigidity to the tissue
ā€¢ Examples: formaldehyde, glutaraldehyde,
ā€¢ Others; metal salts such as mercuric and zinc chloride,
osmium tetroxide
22
Formaldehyde fixation (1)
ā€¢ Pure formaldehyde is a gas, dissolve in water to form a solution
containing 37-40% formaldehyde (formalin)
ā€“ Commonly used : 10% neutral buffered formalin
ā€¢ Protein secondary structure intact. Only modifies tertiary and
quaternary structures.
ā€¢ Methylene bridge cross-links and mostly (90%) retrievable, with
little loss (<1%) of protein.
ā€¢ Cannizzaro reaction??
23
24
25
Formaldehyde fixation (2)
ā€¢ Paraformaldehyde is a polymerized form of formaldehyde,
usually obtained as a fine white powder, which depolymerizes
back to formalin when heated
ā€¢ Formalin penetrate tissue well but relatively slow.
ā€¢ Oxidation of formaldehyde results in an acid solution (formic
acid)
ā€¢ Acid formalin leads to the formation of brown-black pigment
with degraded haemoglobin.
26
Formalin artefacts
27
Formalin pigments
Tissue separation by
prolonged fixation
Formulations of formaldehyde
ā€¢ Neutral buffered 10% formalin
ā€¢ Formal (10% formalin) saline
ā€¢ Formal (10% formalin) zinc unbuffered
ā€¢ Formal (10% formalin), calcium acetate
ā€“ Good fixative for preservation of lipids
28
Glutaraldehyde fixation (1)
ā€¢ It does not penetrate thicker tissue specimens as
effectively as formaldehyde. Thus small blocks of tissue
is required.
ā€¢ It may offer a more rigid or tightly linked fixed.
ā€¢ It results in better preservation of ultrastructure but the
rate of penetration is slow.
ā€¢ Suitable for electron microscopy
29
ā€¢ It causes rapid and irreversible changes, fixes
quickly gives best overall cytoplasmic and nuclear
detail.
ā€¢ Some fixation protocols call for a combination of
formaldehyde and glutaraldehyde, so that their
respective strengths complement one another.
30
Glutaraldehyde fixation (2)
Oxidising fixatives (1)
ā€¢ Oxidizing agents include permanganate fixatives
(potassium permanganate), dichromate fixatives
(potassium dichromate), and osmium tetroxide.
ā€¢ They cause extensive denaturation despite preserving
fine cell structure and are used mainly as secondary
fixatives.
ā€¢ Osmium tetroxide is often used as a secondary fixative
when samples are prepared for electron microscopy.
31
Oxidising fixatives (2)
ā€¢ Large proportions of proteins and carbohydrates are lost
from tissues during osmium fixation due slow
penetration and reaction rates.
ā€¢ Can be used to stain lipids in frozen sections
ā€¢ Osmium tetroxide fixation however causes tissue
swelling which is reversed during dehydration steps.
32
Mercuric fixatives
ā€¢ Mercurials fix tissue by an unknown mechanism.
ā€¢ These fixatives penetrate relatively poorly and cause
some tissue hardness, but are fast and give excellent
nuclear detail
ā€¢ Mercuric pigments removed by iodine solution followed
by sodium thiosulphate
33
Formulations of Mercuric fixatives
ā€¢ They contain mercuric chloride and include such well-
known fixatives as B-5, Zenker's and Helly solution
ā€¢ Their best application is for fixation of bone marrow,
lymph nodes , spleen and other hematopoietic tissues
34
Characteristics of an ideal fixatives (1)
ā€¢ Avoid excessive hardness of tissue
ā€¢ Allows enhanced staining of tissue
ā€¢ Should have good toxicological and flammability profiles
to permit safe use
ā€¢ It should penetrate and fix tissues rapidly
35
Characteristics of an ideal fixatives (2)
ā€¢ Should be cost-effective
ā€¢ It must also permit the recovery of macromolecules
including proteins, mRNA and DNA without any
extensive modifications
ā€¢ It should allow tissue to be stored for long time
ā€¢ It must kill the cell quickly without shrinkage or
swelling
36
Factors affecting the quality of fixation (1)
ā€¢ Buffers and pH
ā€¢ Duration of fixation and size of specimens
Ć¼ Medawar, (1941) established that fixatives obey the
diffusion laws. That is, the depth penetrated is
proportional to the square root of time. Each fixative
has a unique coefficient of diffusibility, designated K.
Penetration rate may be determined from the
formula;
d = K x āˆšt
Where d = depth in mm, K = the Medawar coefficient
āˆšt = the square root of fixation time in hours.
37
Ć¼ constituents of compound fixatives will penetrate tissue
at different rates
Ć¼ The fixative volume should be at least 10-20 times the
volume of tissue specimen
Ć¼ Gross specimens, bloody/body fluid and unfixed gross
specimens??
38
Factors affecting the quality of fixation (2)
ā€¢ Temperature
ā€¢ Concentration
ā€¢ Osmolality of fixatives and ionic composition
ā€¢ Additives
39
Factors affecting the quality of fixation (2)
THANK YOU FOR LISTENING
40

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Fixation.pptx Yr 2.pdf

  • 1. FIXATION AND FIXATIVES E. Adankwah, Ph.D 1
  • 2. Background ā€¢ Specimen accession ā€“ Tissue specimens received has request form that lists patients information, history along with a description of the site of origin ā€“ Specimens are accessioned by giving them a unique number by which they will be identified . 2
  • 3. Background 3 ā€¢ Gross examination ā€“ Tissue are examined by a pathologist, pathologist assistant or resident. ā€“ Involves describing the specimen and placing all or parts of it into a small plastic cassette which holds the tissue for subsequent processes.
  • 6. Background ā€¢ When a tumour is suspected, then the specimen is often marked with ink in order to mark the margins of the specimen. ā€¢ Different colour inks can be use to identify different areas. ā€¢ The macroscopic description is usually dictated for subsequent secretarial transcription, or occasionally can be simply written down for typing later. 6
  • 7. 7
  • 8. 8
  • 9. Stages of tissue processing Grossing Surgical 9
  • 10. Fixation ā€¢ Tissue block is taken by biopsy, surgical excision or postmortem ā€¢ Fixation is a chemical process by which biological tissues are preserved from decay, either through autolysis or putrefaction. ā€¢ Fixation terminates any ongoing biochemical reactions, and may also increases the mechanical strength or stability of the treated tissues 10
  • 11. Purpose of Fixation ā€¢ To preserve a sample of biological material (tissue or cells) as close to its natural state as possible in the process of preparing tissue for examination. ā€¢ To prevent postmortem changes like autolysis and putrefaction ā€¢ Preservation of chemical compounds and microanatomic constituents so that further histochemistry is possible ā€¢ Harden the tissues, as fixation causes coagulation of proteins. ā€¢ Fixation has a mordanting effect, facilitating subsequent staining of tissues 11
  • 12. Classification of Fixatives:- ā€¢ Physical fixatives ā€“ Heat ā€“ Microwaving ā€“ Freeze-drying and substitutes ā€¢ Chemical fixatives ** General classification; Heat, Perfusion and immersion 12
  • 15. Mechanism of action of fixatives ā€¢ Based on their mode of action fixatives can be classified as; ā€“ Cross-linking fixatives: Aldehydes ā€“ Oxidising agents ā€“ Coagulant/Precipitating fixatives (denaturing) ā€“ Other fixatives 15
  • 16. Coagulant/Precipitating fixatives (1) ā€¢ Coagulating of macromolecules such as lipoproteins, fibrous proteins (collagen) to maintain tissue morphology. ā€¢ It act by reducing the solubility of protein molecules and by disrupting the hydrophobic interactions which give many proteins their tertiary structure 16
  • 17. ā€¢ Protein primary structure intact. Alters secondary and tertiary structures ā€¢ Hydrophilic/phobic inversion often irretrievably, with loss of up to 40% of protein. ā€¢ The most commonly used precipitating fixatives are ethanol, methanol and acetone ā€¢ Other types of coagulant fixatives include picric acid and trichloroacetic acid ā€¢ Acetic acid coagulates nucleic acids but not proteins. ā€“ Used as additive to prevent nucleic acid loss 17 Coagulant/Precipitating fixatives (2)
  • 18. ā€¢ Picric acid dissolves in water to form weak acid solution. It forms salt with basic groups of protein, causing the proteins to coagulate ā€¢ Picric acid give brighter staining but may cause hydrolysis and loss of nucleic acids in low pH solutions 18 Coagulant/Precipitating fixatives (3)
  • 19. Formulations of Picric acid fixatives ā€¢ Bouinā€™s solution: excellent general fixative for connective tissue stains and fatty tissues ā€¢ Hollandeā€™s solution: Useful of GIT biopsies and endocrine tissue ā€¢ Rossmanā€™s and Gendreā€™s fluid 19
  • 20. Formulations of dehydrant coagulant fixatives ā€¢ Absolute Ethanol and 70ā€“95% Ethanol ā€¢ 100% Methanol ā€¢ 100% Acetone ā€¢ Clarke's solution ā€“ It give good nuclear detail but loss of lipids ā€¢ Carnoy's fixative: Useful for RNA stains ā€“ It shrinks and hardens tissue, useful in cytology to lyse red blood cells 20
  • 21. Pitfalls of Coagulant fixatives ā€¢ Not useful for ultrastructural analysis as it causes cytoplasmic clumping and poor preservation of mitochondria and secretory granules. ā€¢ The alcohols are known to cause shrinkage of tissue during fixation. ā€¢ Acetic acid alone is associated with tissue swelling; combining the two may result in better preservation of tissue morphology. 21
  • 22. Cross-linking fixatives ā€¢ Mode of action: they act by creating covalent chemical bonds between proteins in tissue ā€¢ This anchors soluble proteins to the cytoskeleton, and lends additional rigidity to the tissue ā€¢ Examples: formaldehyde, glutaraldehyde, ā€¢ Others; metal salts such as mercuric and zinc chloride, osmium tetroxide 22
  • 23. Formaldehyde fixation (1) ā€¢ Pure formaldehyde is a gas, dissolve in water to form a solution containing 37-40% formaldehyde (formalin) ā€“ Commonly used : 10% neutral buffered formalin ā€¢ Protein secondary structure intact. Only modifies tertiary and quaternary structures. ā€¢ Methylene bridge cross-links and mostly (90%) retrievable, with little loss (<1%) of protein. ā€¢ Cannizzaro reaction?? 23
  • 24. 24
  • 25. 25
  • 26. Formaldehyde fixation (2) ā€¢ Paraformaldehyde is a polymerized form of formaldehyde, usually obtained as a fine white powder, which depolymerizes back to formalin when heated ā€¢ Formalin penetrate tissue well but relatively slow. ā€¢ Oxidation of formaldehyde results in an acid solution (formic acid) ā€¢ Acid formalin leads to the formation of brown-black pigment with degraded haemoglobin. 26
  • 27. Formalin artefacts 27 Formalin pigments Tissue separation by prolonged fixation
  • 28. Formulations of formaldehyde ā€¢ Neutral buffered 10% formalin ā€¢ Formal (10% formalin) saline ā€¢ Formal (10% formalin) zinc unbuffered ā€¢ Formal (10% formalin), calcium acetate ā€“ Good fixative for preservation of lipids 28
  • 29. Glutaraldehyde fixation (1) ā€¢ It does not penetrate thicker tissue specimens as effectively as formaldehyde. Thus small blocks of tissue is required. ā€¢ It may offer a more rigid or tightly linked fixed. ā€¢ It results in better preservation of ultrastructure but the rate of penetration is slow. ā€¢ Suitable for electron microscopy 29
  • 30. ā€¢ It causes rapid and irreversible changes, fixes quickly gives best overall cytoplasmic and nuclear detail. ā€¢ Some fixation protocols call for a combination of formaldehyde and glutaraldehyde, so that their respective strengths complement one another. 30 Glutaraldehyde fixation (2)
  • 31. Oxidising fixatives (1) ā€¢ Oxidizing agents include permanganate fixatives (potassium permanganate), dichromate fixatives (potassium dichromate), and osmium tetroxide. ā€¢ They cause extensive denaturation despite preserving fine cell structure and are used mainly as secondary fixatives. ā€¢ Osmium tetroxide is often used as a secondary fixative when samples are prepared for electron microscopy. 31
  • 32. Oxidising fixatives (2) ā€¢ Large proportions of proteins and carbohydrates are lost from tissues during osmium fixation due slow penetration and reaction rates. ā€¢ Can be used to stain lipids in frozen sections ā€¢ Osmium tetroxide fixation however causes tissue swelling which is reversed during dehydration steps. 32
  • 33. Mercuric fixatives ā€¢ Mercurials fix tissue by an unknown mechanism. ā€¢ These fixatives penetrate relatively poorly and cause some tissue hardness, but are fast and give excellent nuclear detail ā€¢ Mercuric pigments removed by iodine solution followed by sodium thiosulphate 33
  • 34. Formulations of Mercuric fixatives ā€¢ They contain mercuric chloride and include such well- known fixatives as B-5, Zenker's and Helly solution ā€¢ Their best application is for fixation of bone marrow, lymph nodes , spleen and other hematopoietic tissues 34
  • 35. Characteristics of an ideal fixatives (1) ā€¢ Avoid excessive hardness of tissue ā€¢ Allows enhanced staining of tissue ā€¢ Should have good toxicological and flammability profiles to permit safe use ā€¢ It should penetrate and fix tissues rapidly 35
  • 36. Characteristics of an ideal fixatives (2) ā€¢ Should be cost-effective ā€¢ It must also permit the recovery of macromolecules including proteins, mRNA and DNA without any extensive modifications ā€¢ It should allow tissue to be stored for long time ā€¢ It must kill the cell quickly without shrinkage or swelling 36
  • 37. Factors affecting the quality of fixation (1) ā€¢ Buffers and pH ā€¢ Duration of fixation and size of specimens Ć¼ Medawar, (1941) established that fixatives obey the diffusion laws. That is, the depth penetrated is proportional to the square root of time. Each fixative has a unique coefficient of diffusibility, designated K. Penetration rate may be determined from the formula; d = K x āˆšt Where d = depth in mm, K = the Medawar coefficient āˆšt = the square root of fixation time in hours. 37
  • 38. Ć¼ constituents of compound fixatives will penetrate tissue at different rates Ć¼ The fixative volume should be at least 10-20 times the volume of tissue specimen Ć¼ Gross specimens, bloody/body fluid and unfixed gross specimens?? 38 Factors affecting the quality of fixation (2)
  • 39. ā€¢ Temperature ā€¢ Concentration ā€¢ Osmolality of fixatives and ionic composition ā€¢ Additives 39 Factors affecting the quality of fixation (2)
  • 40. THANK YOU FOR LISTENING 40