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Int. J. Agri. & Agri. R.
Liaqat et al.
Page 86
RESEARCH PAPER OPEN ACCESS
Correlation and path analysis for genetic divergence of
morphological and fiber traits in upland cotton (Gossypium
hirsutum L.)
Shoaib Liaqat1*
, Rana Imtiaz Ahmed1
, Muhammad Rafiq1
, Saghir Ahmad1
, Abdul
Qayyum2
, Makiya Rafiq2
, Amna Bibi1
, Nadia Hussain1
1
Cotton Research Station Multan, Pakistan
2
Department of Plant Breeding and Genetics Bahauddin Zakariya University Multan, Pakistan
Article published on October 17, 2015
Key words: Correlation, Path coefficient, Heritability, Genetic advance, Principal component analysis.
Abstract
Seventy five genotypes of cultivated cotton (Gossypium hirsutum L.) were studied for morphological
characteristics i-e plant height, monopodial branches, sympodial branches, boll weight, seed volume, seed
density, seed index and fiber characters. Data were subjected to analysis of variance and estimates were made for
genetic advance, broad sense heritability and coefficient of variance for the traits. ANOVA revealed highly
significant variability among genotypes for all the characteristics studied. The estimates for heritability were
higher for seed index (0.93) and plant height (0.93). The highest value (6.4) for genetic advance was observed for
sympodial branches whereas lowest value was (0.17) for boll weight. Correlation analysis revealed positive and
significant for most of the parameters. In path coefficient, the number of sympodial branches, boll weight, lint
index and lint weight had maximum direct and positive effect on fiber fineness of seed cotton. Whereas, the
number of monopodial branches, plant height, seed index, seed volume, seed density, staple length, fiber strength
and ginning out turn (G.O.T%) had direct and negative effects on fiber of seed cotton. The principle component
analysis (PCA) revealed significant differences between genotypes and the first four components with Eigen
values greater than 1 contributed 66.68% of the variability among the genotypes. The grouping of genotypes
possessing excelled traits signifies genetic potential of the germplasm for the improvement of seed and fiber
characteristics in cotton crop.
* Corresponding Author: Shoaib Liaqat  shoaib87pk@hotmail.com
International Journal of Agronomy and Agricultural Research (IJAAR)
ISSN: 2223-7054 (Print) 2225-3610 (Online)
http://www.innspub.net
Vol. 7, No. 4, p. 86-94, 2015
Int. J. Agri. & Agri. R.
Liaqat et al.
Page 87
Introduction
Agriculture is not optional in term of conserving
genetic diversity, but essential to maintain natural
resources for sustainable agriculture. Evaluation of
biodiversity is of prime importance for analysis of
genetic medley in genotypes and introgressive
hybridization of favorable attributes from sundry
germplasm into the accessible genetic base.
(Thompson and Nelson, 1998). Cotton has played a
key role in the national economy such as in trade,
industrial activities, employment, and foreign earning
etc. Before initiating any cotton improvement
program, the precise knowledge about the nature and
genetic potential of existing germplasm, and extent of
relationship and association of different
morphological and yield contributing traits with the
seed cotton yield is of vital importance (Soomro et al.,
2005 & 2008).
When affianced with a hefty number of genotypes,
multivariate biometrical techniques are generally
used to evaluate biodiversity respective of data set.
Among these biometrical techniques principal
component analysis (PCA), principal coordinate
analysis (PCoA), cluster analysis and multi
dimensional scaling (MDS) mostly utilized by the
plant breeders (Brown- Guedira, et al., 2000).
Correlation coefficient analysis determines the
relationship b/w various parameters, so it doesn’t
determine always decisive results about
determination of plant selection criteria mentioned
that genetic variances were found almost greater than
the environmental variances. Genetic variability and
positive correlation were observed for yield traits in
G. hirsutum (Iqbal et al., 2003; Wang et al., 2004).
The corresponding change and improvement in a
particular character can be predetermined at the
expense of the proper improvement in different
upland cotton cultivars for yield and other economic
traits (Ahmad et al., 2008; Rao and Mary, (1996).
Path coefficient analysis revealed the
relationship among traits and used to develop
selection criteria for complex traits in several crop
species (Iqbal et al., 2006). Principal component
analysis (PCA) improvises pattern of variation
existing between the genotypes and each genotype
can be allocated to a single group by imitating
significance of humongous contributor to the entire
variation at every axis of differentiation (Saeed et al.,
2014).
Keeping in view the vitality of genetic diversity for
cotton breeding, the present investigation was
conducted with a high precision level. In this study, a
set of seventy five cotton genotypes were evaluated;
(i) to assess the extent of variability for twelve
parameters (ii) to explore grouping pattern (iii) to
notify genetically diverse but agronomically
important genotypes.
Material and methods
The present research was conducted in the
Department of Plant Breeding and Genetics,
University College of Agriculture during 2013-2014.
Plant material consists of 75 genotypes of cotton
(Table 1).
The experiment was laid out in a randomized
complete block design (RCBD) with three replications
of each genotype. All agronomic practices were
adopted. At maturity, ten plants from each entry were
tagged and data were recorded for plant height (cm),
no. of monopodial branches, no. of sympodial
branches, boll weight (g), seed index (g), lint index
(g), seed volume, seed density, Ginning out turn (%),
fiber length (mm), fiber strength (g/tex) and fiber
fineness (µg/ inch).
The average plant height (cm) of 10 plants was
measured y using meter rod. No. of monopodial
branches (indirect fruiting branches) and no. of
sympodial branches (direct fruiting branches) were
counted at maturity.
Boll Weight was obtained by dividing the total seed
cotton yield of the plant by the total number of
effective bolls picked from that particular plant. The
average boll weight was recorded for each entry in the
three replications. Seed index (g) for each genotype
Int. J. Agri. & Agri. R.
Liaqat et al.
Page 88
was obtained by weighing 100 seeds in grams. Lint
Index (g) is measured from the weight of lint obtained
from 100 seeds in grams. However lint index of each
genotype was calculated by applying following
formula:
Lint index = seed index × lint % / 100 - lint %
Ginning out turn (%) was estimated by the lint
obtained from each sample was weighted and lint
percentage was calculated by the following formula;
Lint percentage = weight of lint × 100 / weight of
seed cotton
Seed volume was calculated from 100 seeds in a flask
as by raising 50 ml water level in flask. Seed density
was calculated as by applying the formula:
Seed density = wt. of 100 seed / volume of 100 seed
The fiber characteristics were estimated for fiber
length, fiber strength and fiber fineness by using HVI-
1000.
Data were subjected to statistical analysis for all
morphological, seed and fiber traits in order to
determine estimate of variability. Analysis of variance
for all the characteristics was carried by following
Steel and Torrie (1980).
Correlation analysis was conceded for mean values of
each trait.
All recorded traits were analyzed by numerical
taxonomic techniques using Principal Component
Analysis (PCA) through MINITAB version 13.2.
Results and discussion
Variance analysis
Analysis of variance (Table 3) along with heritability
(h2) and genetic advance (GA) for 75 genotypes (Tale
2) indicated significant differences for all the
characters. Heritability of characters was greater for
all the parameters except for boll weight and staple
length which exhibited 0.37 and 0.34 heritability
values, respectively.
Table 1. Names of 75 genotypes of cotton.
V. code Genotype V. code Genotype V. code Genotype
V1 Khaki 900 V26 CIM-506 V51 M-64
V2 Khaki A V27 BH-160 V52 ACALA-63-69
V3 Khaki B V28 Marvi V53 UA 31-43B
V4 Green V29 CIM-446 V54 3-508-OP
V5 Khaki ARRI V30 CRIS-134 V55 Queen of Sindh
V6 B1 V31 CRIS-09 V56 PD-695
V7 B2 Green V32 GOMAL-93 V57 358
V8 B3 V33 NIAB-846 V58 Cute-98
V9 B4 V34 Shahbaz V59 PB-899
V10 B5 V35 MNH-786 V60 119-5
V11 B6 V36 CIM-534 V61 D-9
V12 B7 V37 CIM-499 V62 TD-1
V13 B8 V38 CIM-162 V63 RAVI
V14 Arborium yellow diploid V39 F-280(gl) V64 SNR
V15 HK-113 V40 Glandles, Rex V65 C-132
V16 FH-207 V41 LA-566 FG-ne V66 Goa-18
V17 FH-113 V42 RA-31-55 V67 ANBP
V18 FH-942 V43 ACALA SJ4 V68 FDH-290
V19 FH-941 V44 Stonviolle-697 V69 FDH-170
V20 FH-901 V45 UCD-581 V70 S-2008
V21 NIBGE-2 V46 Coker-310 V71 FDH-313
V22 Hari-Dost V47 Lambright Gln V72 FDH-306
V23 CIM-496 V48 WT-ARK-10-8 V73 FDH-228
V24 NIAB-111 V49 PBG-3 V74 FDH-300
V25 CIM-707 V50 RA 31-42-8 V75 FDH-786
The highest estimate of heritability (0.93) was noticed
for seed index and plant height. Heritable variation
among genotypes which is in close agreement of Khan
et al. (2010). The highest value of GA (6.4) was
recorded for Sympodial branches but for seed density
the lowest GA (0.23) was observed. The genotypes
Int. J. Agri. & Agri. R.
Liaqat et al.
Page 89
showed a significant (P<0.01) variability for
Monopodial branches and for lint index. Similarly,
the genotypes showed a marked contrast (P< 0.001)
for seed index. Greater magnitude of broad sense
heritability coupled with higher genetic advance in
characters under study provided the evidence that
these characters were under the control of additive
genetic effects and is also supported by the findings of
other workers (Ahmad et al., 2003; Naveed et al.,
2004; Muhammad et al., 2012).
Table 2. Coefficient of Variation, Genetic Advance and Heritability.
Sr.# PLANT CHARACTERS C.V (%) G.A Heritability (%)
1 Seed index 7.74 5.6 0.93
2 Boll weight 16.58 0.17 0.37
3 Lint index 26.48 0.90 0.68
4 Plant height 15.17 5.4 0.93
5 Monopodial branches 44.26 2.5 0.79
6 Sympodial branches 17.94 6.4 0.85
7 Seed volume 13.79 3.1 0.90
8 Seed density 18.00 4.2 0.84
9 GOT % 13.23 4.7 0.72
10 Staple length 12.18 0.69 0.34
11 Fiber strength 14.21 2.48 0.57
12 Fiber fineness 12.44 3.9 0.79
h2= heritability, GA= genetic advance and CV =coefficient of variance.
Table 3. Estimation of means squares of all 12 characters from analysis of variance (ANOVA) in 75 cotton
genotypes.
SOV D.f See d
index
Boll
weig ht(g )
Li nt
index
Pl ant
He igh t( cm )
Monop odi al
br anche s
Symp odial
br anche s
See d
vol ume
See d
de nsi ty
GO T
(%)
Fi ber
leng th
(m m)
Fi ber
str e ngth
(g/t e x)
Fi ber f ine ne ss
(µg/ i nch)
Repl i cati on 2 0.55 0.33 0.26 500.5 ** 7.96 ** 14.5 7** 2. 77 ** 0.017 6.63 ** 2. 7 ** 2.0 ** 0.814
Ge noty pe s 74 4.53 ** 0.31 12. 64 ** 5380.6 ** 16.35 ** 86.51 ** 18.81 ** 0.119 64. 2** 12. 5** 2.08 * 1.98 *
Err or 148 0.30 0.19 0.83 2 351.0 3.34 12. 19 1.86 0.019 17.6 17.6 12. 4 0.409
Correlation analysis
Genotypic and phenotypic correlation coefficients
between attributes were calculated and their
significance was determined.
Table 4 represents a positive and significant
correlation of seed index with lint index, seed volume,
seed density, GOT, staple length and fiber strength
where as phenotypically negative but highly
significant coefficient of correlation (P<0.05) was
determined in case of boll weight, plant height,
sympodial branches and fiber fineness.
Parameter, boll weight possesses negative and highly
significant correlation with lint index, GOT and staple
length phenotypically and positive and significant
correlation with plant height and fiber strength. It
was observed that lint index had negative and
significant phenotypic correlation with plant height,
sympodial branches and fiber fineness but positive
and significant correlation was found with seed
density and GOT (%) both phenotypically and
genotypically.
Plant height showed negative and highly significant
correlation with seed volume, seed density, staple
length and fiber strength phenotypically but positive
and significant correlation with monopodial and
sympodial branches and fiber fineness.
Int. J. Agri. & Agri. R.
Liaqat et al.
Page 90
Table 4. Genotypic and phenotypic correlation among Gossypium hirsutum L. genotypes.
See d
index
Boll
weig ht
(g)
Li nt
index
Pl ant he ight
(cm)
Monop odi al
br anche s
Symp odial
br anche s
See d
vol ume
(ml)
See d
de nsi ty
(g/ ml)
G.O. T
(%)
Staple
leng th
(m m)
Fi ber
str e ngth
(g/t e x)
Fi ber
Fi ne ne ss
(µg/ i nch)
See d i nde x G
P
1.00
1.00
-0.31
-0.18 **
0.77 *
0.64 **
-0.69
-0.64 **
-0.14
-0.13 *
-0.24
-0.21 **
0.28 *
0.25 **
0.49 *
0.46
0.14 *
0.1 2
0.59 *
0.36 **
0.38 *
0.27 **
-0.43
-0.38 **
Boll w eigh t
(g)
G
P
1.00
1.00
-0.66
-0.38 **
0.42*
0.23 **
0.1 2
0.06
0.11
0.06
0.19
0.1 2
-0.1 2
-0.05
-0.58
-0.3 2**
-0.43
-0.20 **
0.44 *
0.16 *
0.39
0.21**
Li nt i nde x G
P
1.00
1.00
-0.47
-0.38 **
0.03
0.04
-0.19
-0.15 *
0.06
0.06
0.55*
0.42**
0.82*
0.78 **
0.15
0.16 *
-0.22
-0.09
-0.26
-0.19 **
Pl ant he ight
(cm)
G
P
1.00
1.00
0.38 *
0.3 2**
0.38 *
0.33 **
-0.36
-0.34 **
-0.24
-0.20 **
0.02
-0.01
-0.36
-0.21 **
-0.20
-0.16 *
0.69 *
0.60 **
Monop odi al
Branch es
G
P
1.00
1.00
0.19 *
0.17 **
-0.07
-0.07
-0.07
-0.05
0.13 *
0.11
-0.35
-0.1 2
-0.26
-0.15 *
0.27 *
0.22**
Symp odial
Branch es
G
P
1.00
1.00
-0.05
-0.05
-0.13
-0.09
0.05*
0.02
0.09 *
-0.02
-0.01
-0.01
0.15 *
0.1 2
See d v ol um e
(ml)
G
P
1.00
1.00
-0.60
-0.61 **
-0.13
-0.11
-0.17
-0.06
0.11 *
0.08
-0.38
-0.33 **
See d de ns ity G
P
1.00
1.00
0.25 *
0.19 **
0.58*
0.30 **
0.15
0.09
0.04
0.03
G.O. T
(%)
G
P
1.00
1.00
-0.23
-0.02
-0.54
-0.3 2**
0.08
0.05
Staple
leng th
(m m)
G
P
1.00
1.00
0.06
0.1 2
-0.14
-0.02
Fi ber
str e ngth
(g/t e x)
G
P
1.00
1.00
-0.13
-0.11
Fi ber
Fi ne ne ss
(µg/ i nch)
G
P
1.00
1.00
*= Significant, **= Highly Significant.
Table 5. Direct (diagonal) and indirect (off-diagonal) effects of different parameters of cotton.
See d
index
Boll w eigh t
(g)
Li nt
index
Pl ant he ight
(cm)
Monop odi al
br anche s
Symp odial
br anche s
See d
vol ume
(ml)
See d
de nsi ty
(g/ ml)
G.O. T
(%)
Staple
leng th
(m m)
Fi ber
str e ngth
(g/t e x)
Fi ber
Fi ne ne ss
(µg/ i nch)
See d i nde x -0.536 -0.03 0.235 0.127 -0.452 0.017 0.007 0.079 0.255 -0.065 -0.016 -0.057
Boll w eigh t
(g)
0.166 0.102 -0.201 -0.011 0.278 -0.014 -0.003 -0.054 -0.067 0.260 0.011 -0.006
Li nt i nde x -0.415 -0.067 0.303 0.256 -0.312 -0.004 0.006 0.018 0.284 -0.368 -0.004 0.034
Pl ant he ight
(cm)
-0.189 -0.003 0.216 0.360 0.027 -0.03 3 0.001 -0.018 0.151 -0.31 6 -0.004 0.002
Monop odi al
Branch es
0.37 2 0.043 -0.145 0.015 0.651 -0.045 -0.01 2 -0.1.1 -0.1 24 -0.001 0.009 0.031
Symp odial
Branch es
0.080 0.1 2 0.011 0.104 0.25 3 -0.11 -0.006 -0.021 -0.03 7 -0.059 0.009 0.039
See d vol um e
(ml)
0.1 29 0.01 2 -0.059 -0.015 0.25 2 -0.022 -0.031 -0.015 0.069 -0.025 -0.00 2 0.001
See d de ns ity -0.15 2 -0.020 0.020 -0.023 -0.23 0.009 0.001 0.277 -0.31 1 0.059 0.008 -0.01 7
G.O. T
%
-0.265 -0.013 0.16 7 0.105 -0.15 7 0.008 0.004 -0.16 7 0.515 -0.115 -0.015 -0.023
Staple
leng th
(m m)
-0.07 -0.059 0.250 0.255 0.001 -0.015 -0.001 -0.036 0.13 3 -0.446 0.006 0.081
Fi ber
str e ngth
(g/t e x)
-0.3 2 -0.044 0.047 0.054 -0.235 0.041 -0.003 -0.048 0.300 0.105 -0.027 -0.010
Monopodial branches showed negative and
significant association with fiber strength
phenotypically where as positive and significant
correlation was observed for sympodial branches and
fiber fineness both phenotypically and genotypically.
Sympodial branches possessed positive and signicant
association with GOT and fiber fineness
genotypically. Thus the results were in close
conformity to the finding of Naveed et al. (2004),
Rauf et al. (2004), Salahuddin et al. (2010) and Khan
et al. (2010). Seed volume had negative and highly
significant correlation with seed density and fiber
fineness where as positive and significant correlation
for fiber strength was observed. Seed density had
Int. J. Agri. & Agri. R.
Liaqat et al.
Page 91
positive and significant correlation for GOT (%) and
staple length at genotypic level while phenotypically
highly significant for these characters. GOT (%)
represented negative and highly significant
correlation for fiber strength. These results are in
accordance with Ibo et al. (2003), Abuja et al. (2006),
Hussain et al. (2009).
Table 6. Principle components (PCs) for 12 characters in 75 genotypes of cotton (Gossypium hirsutum L).
Statistical Variables PC1 PC2 PC3 PC4
Eigen values 3.3616 2.4111 1.6799 1.2192
Proportion of variance 25.858 18.547 12.922 9.378
Cumulative variance (%) 25.85 44.40 57.32 66.70
Attributes
Seed index 0.0960 0.7905 0.0779 0.3147
Boll weight (g) 0.4404 0.3464 0.3336 0.6348
Lint index 0.1961 -0.4574 0.7343 0.1963
Plant height(cm) -0.9386 0.1989 0.0115 -0.4059
MonopodialBranches -0.8425 0.2239 0.0241 0.3015
Sympodial Branches 0.7170 -0.4201 -0.4106 0.3109
Seed volume (ml) -0.5030 -0.3897 0.1956 0.2167
Seed density (g/ml) -0.8341 -0.4251 -0.2651 0.3547
G.O.T (%) -0.7548 0.0493 0.2445 -0.2415
Staple length(mm) -0.3800 -0.4452 -0.5403 -0.4831
Fiber strength(g/tex) 0.0213 -0.2234 0.4314 0.5612
Fiber Fineness(µg/inch) 0.1352 0.2581 -0.3154 -0.0013
Path coefficient analysis
Table_5 exhibited that direct contribution of seed
index to fiber fineness was negative. While indirect
effects via seed volume, seed density, ginning out
turn, sympodial branches, plant height, and lint index
was found positive. Direct and positive effect of boll
weight towards fiber fineness was observed as
indicated in Table-5. While indirect effects via seed
volume, seed density, ginning out turn, sympodial
branches, plant height, and lint index are negative.
Positive direct effect of lint index towards fiber
fineness was observed as while indirect effects via
monopodial branches, seed index, staple length, fiber
strength sympodial branches, and boll weight was
found negative. The results are in accordance with
Khan et al. ((2010), Tariq et al (2002). A study of
Table_5 revealed the positive direct effect of plant
height on fiber fineness. While negative indirect effect
was observed via seed index, boll weight, seed
density, staple length, fiber strength, sympodial
branches. Direct effect of monopodial branches to
fiber fineness was positive where as indirect effect
was observed via seed volume, seed density, ginning
out turn, staple length, sympodial branches, and lint
index was negative. An examination of Table-5
revealed negative direct effect of Sympodial branches
on fiber fineness while indirect effect were observed
via seed index, monopodial branches, boll weight,
fiber strength, plant height, and lint index was
observed positive. Azhar et al (2009), Iqbal et al
(2003), Abuja et al (2006) also reported the same
investigations. The negative direct effect of seed
volume on fiber fineness. While indirect positive
effects were observed via seed index, monopodial
branches, boll weight and ginning out turn. An
examination of the Table-5 revealed the positive
direct effect of seed density to fiber fineness while
indirect negative effects were observed via seed index,
plant height, boll weight, monopodial branches and
ginning out turn. Direct effect of ginning out turn was
found positive with fiber fineness (Amudha et al.,
1996) .Negative direct effect of staple length to fiber
Int. J. Agri. & Agri. R.
Liaqat et al.
Page 92
fineness was observed while indirect positive effects
were observed via plant height monopodial branches,
ginning out turn, fiber strength, and lint index. A
study of Table-5 revealed the negative direct effect of
fiber strength on fiber fineness (Kaushik et al. 2003).
Principal component analysis
Mean data matrix of 12*75 was subjected to principal
component analysis to find out genetic diversity. Out
of twelve principal components (PC’s) four exhibited
more than 01 eigen value contributing 66.68% of total
variation among genotypes (Table 6). The remaining
08 PC’s showed less than 01 eigen values and were
less significant therefore could not be considered for
additional validation. The first PC and second PC
possessed 25.85 % and 18.54% respectively of the
total variation. PC 1 was more related to boll weight
and sympodial branches while attributes seed index
and boll weight also contributed maximum variation
in PC 2.
Spread out plot
A principal component spread out plot group
genotypes together with greater genetic similarity and
variability based on the genotypes and twelve
variables studied (Fig.1).
Fig. 1. Scattered diagram of two principal components based on mean values of 75 genotypes of cotton.
Greater the distance between genotypes and base of
spread out plot represents more genetic divergent
nature of genotypes. It is evident from the Figure 1,
that the genotypes V2, V57, and V63 exhibited higher
variability thus are spatially evaluated from other
genotypes. Thus desirable genotypes may be selected
from a particular group for future breeding
programmes (Murtaza et al., 2004; Shoaib et al.,
2015; Rana et al., 2015).
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Correlation and path analysis for genetic divergence of morphological and fiber traits in upland cotton (Gossypium hirsutum L.)

  • 1. Int. J. Agri. & Agri. R. Liaqat et al. Page 86 RESEARCH PAPER OPEN ACCESS Correlation and path analysis for genetic divergence of morphological and fiber traits in upland cotton (Gossypium hirsutum L.) Shoaib Liaqat1* , Rana Imtiaz Ahmed1 , Muhammad Rafiq1 , Saghir Ahmad1 , Abdul Qayyum2 , Makiya Rafiq2 , Amna Bibi1 , Nadia Hussain1 1 Cotton Research Station Multan, Pakistan 2 Department of Plant Breeding and Genetics Bahauddin Zakariya University Multan, Pakistan Article published on October 17, 2015 Key words: Correlation, Path coefficient, Heritability, Genetic advance, Principal component analysis. Abstract Seventy five genotypes of cultivated cotton (Gossypium hirsutum L.) were studied for morphological characteristics i-e plant height, monopodial branches, sympodial branches, boll weight, seed volume, seed density, seed index and fiber characters. Data were subjected to analysis of variance and estimates were made for genetic advance, broad sense heritability and coefficient of variance for the traits. ANOVA revealed highly significant variability among genotypes for all the characteristics studied. The estimates for heritability were higher for seed index (0.93) and plant height (0.93). The highest value (6.4) for genetic advance was observed for sympodial branches whereas lowest value was (0.17) for boll weight. Correlation analysis revealed positive and significant for most of the parameters. In path coefficient, the number of sympodial branches, boll weight, lint index and lint weight had maximum direct and positive effect on fiber fineness of seed cotton. Whereas, the number of monopodial branches, plant height, seed index, seed volume, seed density, staple length, fiber strength and ginning out turn (G.O.T%) had direct and negative effects on fiber of seed cotton. The principle component analysis (PCA) revealed significant differences between genotypes and the first four components with Eigen values greater than 1 contributed 66.68% of the variability among the genotypes. The grouping of genotypes possessing excelled traits signifies genetic potential of the germplasm for the improvement of seed and fiber characteristics in cotton crop. * Corresponding Author: Shoaib Liaqat  shoaib87pk@hotmail.com International Journal of Agronomy and Agricultural Research (IJAAR) ISSN: 2223-7054 (Print) 2225-3610 (Online) http://www.innspub.net Vol. 7, No. 4, p. 86-94, 2015
  • 2. Int. J. Agri. & Agri. R. Liaqat et al. Page 87 Introduction Agriculture is not optional in term of conserving genetic diversity, but essential to maintain natural resources for sustainable agriculture. Evaluation of biodiversity is of prime importance for analysis of genetic medley in genotypes and introgressive hybridization of favorable attributes from sundry germplasm into the accessible genetic base. (Thompson and Nelson, 1998). Cotton has played a key role in the national economy such as in trade, industrial activities, employment, and foreign earning etc. Before initiating any cotton improvement program, the precise knowledge about the nature and genetic potential of existing germplasm, and extent of relationship and association of different morphological and yield contributing traits with the seed cotton yield is of vital importance (Soomro et al., 2005 & 2008). When affianced with a hefty number of genotypes, multivariate biometrical techniques are generally used to evaluate biodiversity respective of data set. Among these biometrical techniques principal component analysis (PCA), principal coordinate analysis (PCoA), cluster analysis and multi dimensional scaling (MDS) mostly utilized by the plant breeders (Brown- Guedira, et al., 2000). Correlation coefficient analysis determines the relationship b/w various parameters, so it doesn’t determine always decisive results about determination of plant selection criteria mentioned that genetic variances were found almost greater than the environmental variances. Genetic variability and positive correlation were observed for yield traits in G. hirsutum (Iqbal et al., 2003; Wang et al., 2004). The corresponding change and improvement in a particular character can be predetermined at the expense of the proper improvement in different upland cotton cultivars for yield and other economic traits (Ahmad et al., 2008; Rao and Mary, (1996). Path coefficient analysis revealed the relationship among traits and used to develop selection criteria for complex traits in several crop species (Iqbal et al., 2006). Principal component analysis (PCA) improvises pattern of variation existing between the genotypes and each genotype can be allocated to a single group by imitating significance of humongous contributor to the entire variation at every axis of differentiation (Saeed et al., 2014). Keeping in view the vitality of genetic diversity for cotton breeding, the present investigation was conducted with a high precision level. In this study, a set of seventy five cotton genotypes were evaluated; (i) to assess the extent of variability for twelve parameters (ii) to explore grouping pattern (iii) to notify genetically diverse but agronomically important genotypes. Material and methods The present research was conducted in the Department of Plant Breeding and Genetics, University College of Agriculture during 2013-2014. Plant material consists of 75 genotypes of cotton (Table 1). The experiment was laid out in a randomized complete block design (RCBD) with three replications of each genotype. All agronomic practices were adopted. At maturity, ten plants from each entry were tagged and data were recorded for plant height (cm), no. of monopodial branches, no. of sympodial branches, boll weight (g), seed index (g), lint index (g), seed volume, seed density, Ginning out turn (%), fiber length (mm), fiber strength (g/tex) and fiber fineness (µg/ inch). The average plant height (cm) of 10 plants was measured y using meter rod. No. of monopodial branches (indirect fruiting branches) and no. of sympodial branches (direct fruiting branches) were counted at maturity. Boll Weight was obtained by dividing the total seed cotton yield of the plant by the total number of effective bolls picked from that particular plant. The average boll weight was recorded for each entry in the three replications. Seed index (g) for each genotype
  • 3. Int. J. Agri. & Agri. R. Liaqat et al. Page 88 was obtained by weighing 100 seeds in grams. Lint Index (g) is measured from the weight of lint obtained from 100 seeds in grams. However lint index of each genotype was calculated by applying following formula: Lint index = seed index × lint % / 100 - lint % Ginning out turn (%) was estimated by the lint obtained from each sample was weighted and lint percentage was calculated by the following formula; Lint percentage = weight of lint × 100 / weight of seed cotton Seed volume was calculated from 100 seeds in a flask as by raising 50 ml water level in flask. Seed density was calculated as by applying the formula: Seed density = wt. of 100 seed / volume of 100 seed The fiber characteristics were estimated for fiber length, fiber strength and fiber fineness by using HVI- 1000. Data were subjected to statistical analysis for all morphological, seed and fiber traits in order to determine estimate of variability. Analysis of variance for all the characteristics was carried by following Steel and Torrie (1980). Correlation analysis was conceded for mean values of each trait. All recorded traits were analyzed by numerical taxonomic techniques using Principal Component Analysis (PCA) through MINITAB version 13.2. Results and discussion Variance analysis Analysis of variance (Table 3) along with heritability (h2) and genetic advance (GA) for 75 genotypes (Tale 2) indicated significant differences for all the characters. Heritability of characters was greater for all the parameters except for boll weight and staple length which exhibited 0.37 and 0.34 heritability values, respectively. Table 1. Names of 75 genotypes of cotton. V. code Genotype V. code Genotype V. code Genotype V1 Khaki 900 V26 CIM-506 V51 M-64 V2 Khaki A V27 BH-160 V52 ACALA-63-69 V3 Khaki B V28 Marvi V53 UA 31-43B V4 Green V29 CIM-446 V54 3-508-OP V5 Khaki ARRI V30 CRIS-134 V55 Queen of Sindh V6 B1 V31 CRIS-09 V56 PD-695 V7 B2 Green V32 GOMAL-93 V57 358 V8 B3 V33 NIAB-846 V58 Cute-98 V9 B4 V34 Shahbaz V59 PB-899 V10 B5 V35 MNH-786 V60 119-5 V11 B6 V36 CIM-534 V61 D-9 V12 B7 V37 CIM-499 V62 TD-1 V13 B8 V38 CIM-162 V63 RAVI V14 Arborium yellow diploid V39 F-280(gl) V64 SNR V15 HK-113 V40 Glandles, Rex V65 C-132 V16 FH-207 V41 LA-566 FG-ne V66 Goa-18 V17 FH-113 V42 RA-31-55 V67 ANBP V18 FH-942 V43 ACALA SJ4 V68 FDH-290 V19 FH-941 V44 Stonviolle-697 V69 FDH-170 V20 FH-901 V45 UCD-581 V70 S-2008 V21 NIBGE-2 V46 Coker-310 V71 FDH-313 V22 Hari-Dost V47 Lambright Gln V72 FDH-306 V23 CIM-496 V48 WT-ARK-10-8 V73 FDH-228 V24 NIAB-111 V49 PBG-3 V74 FDH-300 V25 CIM-707 V50 RA 31-42-8 V75 FDH-786 The highest estimate of heritability (0.93) was noticed for seed index and plant height. Heritable variation among genotypes which is in close agreement of Khan et al. (2010). The highest value of GA (6.4) was recorded for Sympodial branches but for seed density the lowest GA (0.23) was observed. The genotypes
  • 4. Int. J. Agri. & Agri. R. Liaqat et al. Page 89 showed a significant (P<0.01) variability for Monopodial branches and for lint index. Similarly, the genotypes showed a marked contrast (P< 0.001) for seed index. Greater magnitude of broad sense heritability coupled with higher genetic advance in characters under study provided the evidence that these characters were under the control of additive genetic effects and is also supported by the findings of other workers (Ahmad et al., 2003; Naveed et al., 2004; Muhammad et al., 2012). Table 2. Coefficient of Variation, Genetic Advance and Heritability. Sr.# PLANT CHARACTERS C.V (%) G.A Heritability (%) 1 Seed index 7.74 5.6 0.93 2 Boll weight 16.58 0.17 0.37 3 Lint index 26.48 0.90 0.68 4 Plant height 15.17 5.4 0.93 5 Monopodial branches 44.26 2.5 0.79 6 Sympodial branches 17.94 6.4 0.85 7 Seed volume 13.79 3.1 0.90 8 Seed density 18.00 4.2 0.84 9 GOT % 13.23 4.7 0.72 10 Staple length 12.18 0.69 0.34 11 Fiber strength 14.21 2.48 0.57 12 Fiber fineness 12.44 3.9 0.79 h2= heritability, GA= genetic advance and CV =coefficient of variance. Table 3. Estimation of means squares of all 12 characters from analysis of variance (ANOVA) in 75 cotton genotypes. SOV D.f See d index Boll weig ht(g ) Li nt index Pl ant He igh t( cm ) Monop odi al br anche s Symp odial br anche s See d vol ume See d de nsi ty GO T (%) Fi ber leng th (m m) Fi ber str e ngth (g/t e x) Fi ber f ine ne ss (µg/ i nch) Repl i cati on 2 0.55 0.33 0.26 500.5 ** 7.96 ** 14.5 7** 2. 77 ** 0.017 6.63 ** 2. 7 ** 2.0 ** 0.814 Ge noty pe s 74 4.53 ** 0.31 12. 64 ** 5380.6 ** 16.35 ** 86.51 ** 18.81 ** 0.119 64. 2** 12. 5** 2.08 * 1.98 * Err or 148 0.30 0.19 0.83 2 351.0 3.34 12. 19 1.86 0.019 17.6 17.6 12. 4 0.409 Correlation analysis Genotypic and phenotypic correlation coefficients between attributes were calculated and their significance was determined. Table 4 represents a positive and significant correlation of seed index with lint index, seed volume, seed density, GOT, staple length and fiber strength where as phenotypically negative but highly significant coefficient of correlation (P<0.05) was determined in case of boll weight, plant height, sympodial branches and fiber fineness. Parameter, boll weight possesses negative and highly significant correlation with lint index, GOT and staple length phenotypically and positive and significant correlation with plant height and fiber strength. It was observed that lint index had negative and significant phenotypic correlation with plant height, sympodial branches and fiber fineness but positive and significant correlation was found with seed density and GOT (%) both phenotypically and genotypically. Plant height showed negative and highly significant correlation with seed volume, seed density, staple length and fiber strength phenotypically but positive and significant correlation with monopodial and sympodial branches and fiber fineness.
  • 5. Int. J. Agri. & Agri. R. Liaqat et al. Page 90 Table 4. Genotypic and phenotypic correlation among Gossypium hirsutum L. genotypes. See d index Boll weig ht (g) Li nt index Pl ant he ight (cm) Monop odi al br anche s Symp odial br anche s See d vol ume (ml) See d de nsi ty (g/ ml) G.O. T (%) Staple leng th (m m) Fi ber str e ngth (g/t e x) Fi ber Fi ne ne ss (µg/ i nch) See d i nde x G P 1.00 1.00 -0.31 -0.18 ** 0.77 * 0.64 ** -0.69 -0.64 ** -0.14 -0.13 * -0.24 -0.21 ** 0.28 * 0.25 ** 0.49 * 0.46 0.14 * 0.1 2 0.59 * 0.36 ** 0.38 * 0.27 ** -0.43 -0.38 ** Boll w eigh t (g) G P 1.00 1.00 -0.66 -0.38 ** 0.42* 0.23 ** 0.1 2 0.06 0.11 0.06 0.19 0.1 2 -0.1 2 -0.05 -0.58 -0.3 2** -0.43 -0.20 ** 0.44 * 0.16 * 0.39 0.21** Li nt i nde x G P 1.00 1.00 -0.47 -0.38 ** 0.03 0.04 -0.19 -0.15 * 0.06 0.06 0.55* 0.42** 0.82* 0.78 ** 0.15 0.16 * -0.22 -0.09 -0.26 -0.19 ** Pl ant he ight (cm) G P 1.00 1.00 0.38 * 0.3 2** 0.38 * 0.33 ** -0.36 -0.34 ** -0.24 -0.20 ** 0.02 -0.01 -0.36 -0.21 ** -0.20 -0.16 * 0.69 * 0.60 ** Monop odi al Branch es G P 1.00 1.00 0.19 * 0.17 ** -0.07 -0.07 -0.07 -0.05 0.13 * 0.11 -0.35 -0.1 2 -0.26 -0.15 * 0.27 * 0.22** Symp odial Branch es G P 1.00 1.00 -0.05 -0.05 -0.13 -0.09 0.05* 0.02 0.09 * -0.02 -0.01 -0.01 0.15 * 0.1 2 See d v ol um e (ml) G P 1.00 1.00 -0.60 -0.61 ** -0.13 -0.11 -0.17 -0.06 0.11 * 0.08 -0.38 -0.33 ** See d de ns ity G P 1.00 1.00 0.25 * 0.19 ** 0.58* 0.30 ** 0.15 0.09 0.04 0.03 G.O. T (%) G P 1.00 1.00 -0.23 -0.02 -0.54 -0.3 2** 0.08 0.05 Staple leng th (m m) G P 1.00 1.00 0.06 0.1 2 -0.14 -0.02 Fi ber str e ngth (g/t e x) G P 1.00 1.00 -0.13 -0.11 Fi ber Fi ne ne ss (µg/ i nch) G P 1.00 1.00 *= Significant, **= Highly Significant. Table 5. Direct (diagonal) and indirect (off-diagonal) effects of different parameters of cotton. See d index Boll w eigh t (g) Li nt index Pl ant he ight (cm) Monop odi al br anche s Symp odial br anche s See d vol ume (ml) See d de nsi ty (g/ ml) G.O. T (%) Staple leng th (m m) Fi ber str e ngth (g/t e x) Fi ber Fi ne ne ss (µg/ i nch) See d i nde x -0.536 -0.03 0.235 0.127 -0.452 0.017 0.007 0.079 0.255 -0.065 -0.016 -0.057 Boll w eigh t (g) 0.166 0.102 -0.201 -0.011 0.278 -0.014 -0.003 -0.054 -0.067 0.260 0.011 -0.006 Li nt i nde x -0.415 -0.067 0.303 0.256 -0.312 -0.004 0.006 0.018 0.284 -0.368 -0.004 0.034 Pl ant he ight (cm) -0.189 -0.003 0.216 0.360 0.027 -0.03 3 0.001 -0.018 0.151 -0.31 6 -0.004 0.002 Monop odi al Branch es 0.37 2 0.043 -0.145 0.015 0.651 -0.045 -0.01 2 -0.1.1 -0.1 24 -0.001 0.009 0.031 Symp odial Branch es 0.080 0.1 2 0.011 0.104 0.25 3 -0.11 -0.006 -0.021 -0.03 7 -0.059 0.009 0.039 See d vol um e (ml) 0.1 29 0.01 2 -0.059 -0.015 0.25 2 -0.022 -0.031 -0.015 0.069 -0.025 -0.00 2 0.001 See d de ns ity -0.15 2 -0.020 0.020 -0.023 -0.23 0.009 0.001 0.277 -0.31 1 0.059 0.008 -0.01 7 G.O. T % -0.265 -0.013 0.16 7 0.105 -0.15 7 0.008 0.004 -0.16 7 0.515 -0.115 -0.015 -0.023 Staple leng th (m m) -0.07 -0.059 0.250 0.255 0.001 -0.015 -0.001 -0.036 0.13 3 -0.446 0.006 0.081 Fi ber str e ngth (g/t e x) -0.3 2 -0.044 0.047 0.054 -0.235 0.041 -0.003 -0.048 0.300 0.105 -0.027 -0.010 Monopodial branches showed negative and significant association with fiber strength phenotypically where as positive and significant correlation was observed for sympodial branches and fiber fineness both phenotypically and genotypically. Sympodial branches possessed positive and signicant association with GOT and fiber fineness genotypically. Thus the results were in close conformity to the finding of Naveed et al. (2004), Rauf et al. (2004), Salahuddin et al. (2010) and Khan et al. (2010). Seed volume had negative and highly significant correlation with seed density and fiber fineness where as positive and significant correlation for fiber strength was observed. Seed density had
  • 6. Int. J. Agri. & Agri. R. Liaqat et al. Page 91 positive and significant correlation for GOT (%) and staple length at genotypic level while phenotypically highly significant for these characters. GOT (%) represented negative and highly significant correlation for fiber strength. These results are in accordance with Ibo et al. (2003), Abuja et al. (2006), Hussain et al. (2009). Table 6. Principle components (PCs) for 12 characters in 75 genotypes of cotton (Gossypium hirsutum L). Statistical Variables PC1 PC2 PC3 PC4 Eigen values 3.3616 2.4111 1.6799 1.2192 Proportion of variance 25.858 18.547 12.922 9.378 Cumulative variance (%) 25.85 44.40 57.32 66.70 Attributes Seed index 0.0960 0.7905 0.0779 0.3147 Boll weight (g) 0.4404 0.3464 0.3336 0.6348 Lint index 0.1961 -0.4574 0.7343 0.1963 Plant height(cm) -0.9386 0.1989 0.0115 -0.4059 MonopodialBranches -0.8425 0.2239 0.0241 0.3015 Sympodial Branches 0.7170 -0.4201 -0.4106 0.3109 Seed volume (ml) -0.5030 -0.3897 0.1956 0.2167 Seed density (g/ml) -0.8341 -0.4251 -0.2651 0.3547 G.O.T (%) -0.7548 0.0493 0.2445 -0.2415 Staple length(mm) -0.3800 -0.4452 -0.5403 -0.4831 Fiber strength(g/tex) 0.0213 -0.2234 0.4314 0.5612 Fiber Fineness(µg/inch) 0.1352 0.2581 -0.3154 -0.0013 Path coefficient analysis Table_5 exhibited that direct contribution of seed index to fiber fineness was negative. While indirect effects via seed volume, seed density, ginning out turn, sympodial branches, plant height, and lint index was found positive. Direct and positive effect of boll weight towards fiber fineness was observed as indicated in Table-5. While indirect effects via seed volume, seed density, ginning out turn, sympodial branches, plant height, and lint index are negative. Positive direct effect of lint index towards fiber fineness was observed as while indirect effects via monopodial branches, seed index, staple length, fiber strength sympodial branches, and boll weight was found negative. The results are in accordance with Khan et al. ((2010), Tariq et al (2002). A study of Table_5 revealed the positive direct effect of plant height on fiber fineness. While negative indirect effect was observed via seed index, boll weight, seed density, staple length, fiber strength, sympodial branches. Direct effect of monopodial branches to fiber fineness was positive where as indirect effect was observed via seed volume, seed density, ginning out turn, staple length, sympodial branches, and lint index was negative. An examination of Table-5 revealed negative direct effect of Sympodial branches on fiber fineness while indirect effect were observed via seed index, monopodial branches, boll weight, fiber strength, plant height, and lint index was observed positive. Azhar et al (2009), Iqbal et al (2003), Abuja et al (2006) also reported the same investigations. The negative direct effect of seed volume on fiber fineness. While indirect positive effects were observed via seed index, monopodial branches, boll weight and ginning out turn. An examination of the Table-5 revealed the positive direct effect of seed density to fiber fineness while indirect negative effects were observed via seed index, plant height, boll weight, monopodial branches and ginning out turn. Direct effect of ginning out turn was found positive with fiber fineness (Amudha et al., 1996) .Negative direct effect of staple length to fiber
  • 7. Int. J. Agri. & Agri. R. Liaqat et al. Page 92 fineness was observed while indirect positive effects were observed via plant height monopodial branches, ginning out turn, fiber strength, and lint index. A study of Table-5 revealed the negative direct effect of fiber strength on fiber fineness (Kaushik et al. 2003). Principal component analysis Mean data matrix of 12*75 was subjected to principal component analysis to find out genetic diversity. Out of twelve principal components (PC’s) four exhibited more than 01 eigen value contributing 66.68% of total variation among genotypes (Table 6). The remaining 08 PC’s showed less than 01 eigen values and were less significant therefore could not be considered for additional validation. The first PC and second PC possessed 25.85 % and 18.54% respectively of the total variation. PC 1 was more related to boll weight and sympodial branches while attributes seed index and boll weight also contributed maximum variation in PC 2. Spread out plot A principal component spread out plot group genotypes together with greater genetic similarity and variability based on the genotypes and twelve variables studied (Fig.1). Fig. 1. Scattered diagram of two principal components based on mean values of 75 genotypes of cotton. Greater the distance between genotypes and base of spread out plot represents more genetic divergent nature of genotypes. It is evident from the Figure 1, that the genotypes V2, V57, and V63 exhibited higher variability thus are spatially evaluated from other genotypes. Thus desirable genotypes may be selected from a particular group for future breeding programmes (Murtaza et al., 2004; Shoaib et al., 2015; Rana et al., 2015). References Abuja LS, Dhayal LX, Parkash R. 2006. A correlation and path coefficient analysis of components in G. hirsutum L. hybrids by usual and fiber quality grouping. Turkish Journal of Agriculture and Forestry 30, 317- 324. Ahmad S, Iqbal MZ, Hussain A, Sadiq MA, Jabbar A. 2003. Gene action and heritability studies in cotton (G. hirsutum L.). International Journal of Biological Sciences 3(4), 443-450. Ahmad W, Khan NU, Khalil MR, Parveen A, Aimen U, Saeed M, Samiullah Shah SA. 2008. Genetic variability and correlation analysis in upland cotton. Sarhad Journal of Agriculture 24, 573-580. Ahmed RI, Liaqat S, Noor E, Qayyum A,
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