A brief introfuction of label-free protein quantification methodsCreative Proteomics
If you want to know more about our services, please visit https://www.creative-proteomics.com/services/label-free-quantification.htm.
Label-free protein quantification is a mass spectrometry-based method for identifying and quantifying relative changes in two or more biological samples instead of using a stable isotope-containing compound to label proteins.
Mass Spectrometry-Based Proteomics Quantification: iTRAQ Creative Proteomics
For more information, please visit: https://www.creative-proteomics.com/services/itraq-based-proteomics-analysis.htm
iTRAQ (isobaric tag for relative and absolute quantitation), is an isobaric labeling method to determine the amount of proteins from different sources in just one single experiment by mass spectrometry, which was developed by Applied Biosystems Incorporation in 2004.
Peptide Mass Fingerprinting (PMF) and Isotope Coded Affinity Tags (ICAT)Suresh Antre
Analytical technique for identifying unknown protein. The peptide mass are compared to database containing the theoretical peptide masses of all known protein sequences.
Peptide mass fingerprinting is a technology to identify proteins. It is a high throughput protein identification technique in which the mass of an unknown protein can be determined. PMF is always performed with MALDI-TOF mass spectrometry
SAR BY NMR (Structure Activity Relationship by Using NMR)SAKEEL AHMED
SAR by NMR is the Nuclear Magnetic Resonance (NMR) based method in which small organic molecules that bind to the proximal site are identified, optimized and finally linked together to produce high-affinity ligands.
It is called “SAR by NMR” because the structure-activity relationship (SAR) is obtained by the Nuclear Magnetic Resonance (NMR).
It is based on the fragments approaches to drug design.
With this technique, compounds with nanomolar affinity for a target protein can be rapidly discovered by tethering two ligands with micromolar affinities.
The method reduces the chemical synthesis and the time required for the discovery of high-affinity ligands and is particularly useful in target-directed drugs research.
The Karolinska Institute (KI) is the largest centre for medical education and research in Sweden and the home of the Nobel Prize in Physiology or Medicine.
KI consists of 22 departments and 600 research groups dedicated to improving human health through research and higher education.
The role of the Kohonen/Grafström team has been to guide the application, analysis, interpretation and storage of so called “omics” technology-derived data within the service-oriented subproject “ToxBank”.
A brief introfuction of label-free protein quantification methodsCreative Proteomics
If you want to know more about our services, please visit https://www.creative-proteomics.com/services/label-free-quantification.htm.
Label-free protein quantification is a mass spectrometry-based method for identifying and quantifying relative changes in two or more biological samples instead of using a stable isotope-containing compound to label proteins.
Mass Spectrometry-Based Proteomics Quantification: iTRAQ Creative Proteomics
For more information, please visit: https://www.creative-proteomics.com/services/itraq-based-proteomics-analysis.htm
iTRAQ (isobaric tag for relative and absolute quantitation), is an isobaric labeling method to determine the amount of proteins from different sources in just one single experiment by mass spectrometry, which was developed by Applied Biosystems Incorporation in 2004.
Peptide Mass Fingerprinting (PMF) and Isotope Coded Affinity Tags (ICAT)Suresh Antre
Analytical technique for identifying unknown protein. The peptide mass are compared to database containing the theoretical peptide masses of all known protein sequences.
Peptide mass fingerprinting is a technology to identify proteins. It is a high throughput protein identification technique in which the mass of an unknown protein can be determined. PMF is always performed with MALDI-TOF mass spectrometry
SAR BY NMR (Structure Activity Relationship by Using NMR)SAKEEL AHMED
SAR by NMR is the Nuclear Magnetic Resonance (NMR) based method in which small organic molecules that bind to the proximal site are identified, optimized and finally linked together to produce high-affinity ligands.
It is called “SAR by NMR” because the structure-activity relationship (SAR) is obtained by the Nuclear Magnetic Resonance (NMR).
It is based on the fragments approaches to drug design.
With this technique, compounds with nanomolar affinity for a target protein can be rapidly discovered by tethering two ligands with micromolar affinities.
The method reduces the chemical synthesis and the time required for the discovery of high-affinity ligands and is particularly useful in target-directed drugs research.
The Karolinska Institute (KI) is the largest centre for medical education and research in Sweden and the home of the Nobel Prize in Physiology or Medicine.
KI consists of 22 departments and 600 research groups dedicated to improving human health through research and higher education.
The role of the Kohonen/Grafström team has been to guide the application, analysis, interpretation and storage of so called “omics” technology-derived data within the service-oriented subproject “ToxBank”.
Protein qualitative analysis based on mass spectrometry explores protein expression within organisms. Mass spectrometry offers highly efficient, robust, and accurate results and is one of the core technologies for proteomic research. Protein identification is a common topic for biochemistry research, and mass spectrometry is considered one of the most useful techniques that solve this issue. Two major strategies that are widely used for protein identification by mass spectrometry are MALDI-TOF-based protein fingerprinting and LC-MS/MS-based peptide sequencing. Meanwhile, LC-MS/MS reserved higher sensitivity and ability than MALDl-TOF and can accurately identify multiple protein components from a single sample. https://www.creative-proteomics.com/services/protein-identification.htm
Label-Free Quantitation and Mapping of the ErbB2 Tumor Receptor by Multiple P...AB SCIEX India
Label-Free Quantitation and Mapping of the ErbB2 Tumor Receptor by Multiple Protease Digestion with Data-Dependent (MS1) and Data-Independent (MS2) Acquisitions :
Mass spectrometry-based proteomics combined with
stable-isotope labeling or tagging is a powerful technique for large-scale quantitation and unbiased characterization of the proteome. Nonetheless, it is well known that unbiased discovery proteomics typically suffers from limited dynamic range and sampling efficiency, which can only be partially addressed by incorporating orthogonal fractionation steps.
METABOLOMICS is the systematic study of the small molecular metabolites in a cell, tissue, biofluid, or cell culture media that are the tangible result of cellular processes or responses to an environmental stress.
Analysis Analysis Analysis Analysisof the entire entire entire protein protein proteinproteincomplementcomplement complement complement of acell, cell, tissue, tissue, tissue, or organism organism organism under under aspecific, specific, specific, defined defined set of conditions conditions conditions .
• Relies Relies Relies on 3basic technological technological technological technological technological cornerstones cornerstones cornerstones cornerstones
• MethodMethod MethodMethod to fractionatefractionate fractionatefractionate fractionatefractionate complexcomplex complex protein/protein/ protein/ protein/ peptide peptide peptidemixturesmixtures mixtures
• MS to acquire acquire the data data necessary necessary to identify identify identifyidentifyindividual individual individual individualproteins proteins
• Bioinformatics Bioinformatics Bioinformatics Bioinformatics Bioinformatics Bioinformatics Bioinformaticsto analyze analyze and assemble assemble the MS data
This is the presentation on Role of advancement in instrumentation in pharmacodynamic evaluation of drugs
in clinical trials.
CONTENTS
Concept of medical instrument and instrumentation
Centrifuge
PCR
HPLC
Flow cytometry
Mass SPECTROMETRY
Minimally invasive technologies in PD
Conclusion
A General Review on Bioanalytical Method Development & Validation for LC-MS/MSijtsrd
Rapid growth in the use of LC-MS/MS for the analysis of drugs in biological matrices has been compelled by the need for timely and high-quality data at every stages in drug discovery and development process: from throughput screening of drug candidates and rapid data generation for pre-clinical studies to almost 'real-time' analysis of clinical samples. A well developed bioanalytical development and its validation plays a pivotal role in achieving the goals. . The aim behind this review is to enlighten the need of validation which provide a practical approach for determining the different parameters like selectivity, specifity, limit of detection, lower limit of quantitation, linearity, range, accuracy, precision, recovery, stability, ruggedness, and robustness to help the perfect studies of pharmacokinetic, toxic kinetic, bioavailability and bioequivalence. Bio-analysis study is for the quantitative determination of drug and their metabolites in biological fluids. Accurate and robust methods for quantitative analysis of drug and their metabolites are important for the successful conduct of pre-clinical, bio-pharmaceutics and clinical pharmacology. Ashutosh Badola | Preeti Joshi | Preeti Kothiyal"A General Review on Bioanalytical Method Development & Validation for LC-MS/MS" Published in International Journal of Trend in Scientific Research and Development (ijtsrd), ISSN: 2456-6470, Volume-2 | Issue-4 , June 2018, URL: http://www.ijtsrd.com/papers/ijtsrd14203.pdf http://www.ijtsrd.com/pharmacy/pharmaceutics/14203/a-general-review-on-bioanalytical-method-development-and-validation-for-lc-msms/ashutosh-badola
Business Valuation Principles for EntrepreneursBen Wann
This insightful presentation is designed to equip entrepreneurs with the essential knowledge and tools needed to accurately value their businesses. Understanding business valuation is crucial for making informed decisions, whether you're seeking investment, planning to sell, or simply want to gauge your company's worth.
Event Report - SAP Sapphire 2024 Orlando - lots of innovation and old challengesHolger Mueller
Holger Mueller of Constellation Research shares his key takeaways from SAP's Sapphire confernece, held in Orlando, June 3rd till 5th 2024, in the Orange Convention Center.
Implicitly or explicitly all competing businesses employ a strategy to select a mix
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involves recognizing relationships between elements of the marketing mix (e.g.,
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Discover the innovative and creative projects that highlight my journey throu...dylandmeas
Discover the innovative and creative projects that highlight my journey through Full Sail University. Below, you’ll find a collection of my work showcasing my skills and expertise in digital marketing, event planning, and media production.
Cracking the Workplace Discipline Code Main.pptxWorkforce Group
Cultivating and maintaining discipline within teams is a critical differentiator for successful organisations.
Forward-thinking leaders and business managers understand the impact that discipline has on organisational success. A disciplined workforce operates with clarity, focus, and a shared understanding of expectations, ultimately driving better results, optimising productivity, and facilitating seamless collaboration.
Although discipline is not a one-size-fits-all approach, it can help create a work environment that encourages personal growth and accountability rather than solely relying on punitive measures.
In this deck, you will learn the significance of workplace discipline for organisational success. You’ll also learn
• Four (4) workplace discipline methods you should consider
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Digital Transformation and IT Strategy Toolkit and TemplatesAurelien Domont, MBA
This Digital Transformation and IT Strategy Toolkit was created by ex-McKinsey, Deloitte and BCG Management Consultants, after more than 5,000 hours of work. It is considered the world's best & most comprehensive Digital Transformation and IT Strategy Toolkit. It includes all the Frameworks, Best Practices & Templates required to successfully undertake the Digital Transformation of your organization and define a robust IT Strategy.
Editable Toolkit to help you reuse our content: 700 Powerpoint slides | 35 Excel sheets | 84 minutes of Video training
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In the Adani-Hindenburg case, what is SEBI investigating.pptxAdani case
Adani SEBI investigation revealed that the latter had sought information from five foreign jurisdictions concerning the holdings of the firm’s foreign portfolio investors (FPIs) in relation to the alleged violations of the MPS Regulations. Nevertheless, the economic interest of the twelve FPIs based in tax haven jurisdictions still needs to be determined. The Adani Group firms classed these FPIs as public shareholders. According to Hindenburg, FPIs were used to get around regulatory standards.
Kseniya Leshchenko: Shared development support service model as the way to ma...Lviv Startup Club
Kseniya Leshchenko: Shared development support service model as the way to make small projects with small budgets profitable for the company (UA)
Kyiv PMDay 2024 Summer
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𝐓𝐉 𝐂𝐨𝐦𝐬 (𝐓𝐉 𝐂𝐨𝐦𝐦𝐮𝐧𝐢𝐜𝐚𝐭𝐢𝐨𝐧𝐬) is a professional event agency that includes experts in the event-organizing market in Vietnam, Korea, and ASEAN countries. We provide unlimited types of events from Music concerts, Fan meetings, and Culture festivals to Corporate events, Internal company events, Golf tournaments, MICE events, and Exhibitions.
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Improving profitability for small businessBen Wann
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In this masterclass, presented at the Global HR Summit on 5th June 2024, Luan Wise explored the essential features of social media platforms that support talent acquisition, including LinkedIn, Facebook, Instagram, X (formerly Twitter) and TikTok.
1. Analytical Method Development and Validation
Peptides are widely found in nature and have important physiological
effects on the human body. In recent years, with the vigorous
development of life science research, the research progress on
peptides is changing with each passing day. Peptides have shown
magical research and application value in immune function,
information transmission, cell secretion, precursor signal, disease
occurrence and treatment.
Introduction to Detection Methods
Currently, high performance liquid chromatography (HPLC), capillary
electrophoresis (CE), mass spectrometry (MS) and their associated
technology have become a primary means of measuring the peptide,
and are being more widely used.
High performance liquid chromatography (HPLC)
HPLC is a new separation and analysis technology developed on the
basis of classical liquid chromatography and gas chromatography. It
has the characteristics of high separation efficiency, high speed, easy
operation, good detection sensitivity and wide application range to
samples. It has been widely used for the analysis and determination
of peptides. Reversed-phase high performance liquid
chromatography (RP-HPLC) has a very high resolution for the
analysis and purification of non-polar small molecule peptides with a
molecular mass below 1000.
Capillary electrophoresis (CE)
CE is a kind of liquid phase separation technology that uses a
high-voltage electric field as a driving force and a capillary as a
separation channel to separate components according to the
difference in mobility and distribution between components in a
sample.
Mass spectrometry (MS)
The mass spectrum of a peptide detected by mass spectrometry (MS)
2. is usually referred to as a fingerprint. The biggest advantage of mass
spectrometry is stability, reproducibility and high accuracy. At present,
mass spectrometry is applied to peptide detection mainly by
matrix-assisted laser desorption time-of-flight mass spectrometry
(MALDI-TOF-MS), liquid chromatography-mass spectrometry (LC-MS)
and capillary electrophoresis-mass spectrometry (CE-MS).
Hydrophobic interaction chromatography (HIC)
HIC is the use of a hydrophobic group in a peptide to create a
hydrophobic interaction with a stationary phase for separation
analysis. Iron-Exchange chromatography (IEXC) can be used to
isolate and purify biologically active peptides under neutral conditions
using different chargeability of the peptide. Methods for detection of
peptide analysis also include chromatography of membrane protein
(CMP), high-performance displacement chromatography (HPDC),
perfusion chromatography (PC), affinity chromatography (AC).
In addition to the above methods, amino acid composition analysis,
amino acid sequence analysis, field analytical mass spectrometry, IR,
UV spectroscopy, CD, circular dichroism, bioassay, radioisotope
labeling and immunological methods have been applied to analyze
the peptides characterization.
Our Services
Extraction of peptides: protease inactivation
Pretreatment: removal of protein
Peptide purification: chromatography, capillary gel
Peptide identification: MALDI-TOF-MS, LC-MS, CE-MS
Peptide quantification: immunoassay, isotope mass shift
By removing all proteins in biological samples, body fluids, and tissue
extracts by size exclusion chromatography, LC-MS-based assays can
be quickly established and validated to identify peptides with high
precision and repeatability. After a detailed and comprehensive
discussions with customers, we will provide you with a peptide set
research and analysis services tailored.
3. Creative Peptides has successfully developed a reliable method for
the analysis of peptides by using several of the peptide analysis
methods mentioned above. Creative Peptides is dedicated to the
detection and analysis of peptides and provides a powerful tool for
research in the fields of protein chemistry such as medicine, clinical
pathology and preventives.
References:
1. Schmid, I., Bonnington, L., Gerl, M., Bomans, K., Thaller, A. L.,
Wagner, K., ... & Hasmann, M. (2018). Assessment of susceptible
chemical modification sites of trastuzumab and endogenous human
immunoglobulins at physiological conditions. Communications
Biology, 1(1), 28.
2. Kaneko, N., Yoshimori, T., Yamamoto, R., Capon, D. J., Shimada,
T., & Sato, T. A., et al. (2013). Multi epitope-targeting
immunoprecipitation using f(ab') fragments with high affinity and
specificity for the enhanced detection of a peptide with
matrix-assisted laser desorption ionization-time-of-flight mass
spectrometry. Analytical Chemistry, 85(6), 3152-3159.
3. Gilg, D., Riedl, B., Zier, A., & Zimmermann, M. F. (1996). Analytical
methods for the characterization and quality control of pharmaceutical
peptides and proteins, using erythropoietin as an example. Pharm
Acta Helv, 71(6), 383-394.