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Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
1
Innovation Intelligence®
Altair on Intel® Xeon Phi™:
Optimizing HPC For
Breakthrough Performance
Eric Lequiniou
Director, High Performance Computing
ISC’13  Leipzig, Germany
“Our vision is to radically change
the way organizations design
products and make decisions.”
– James R. Scapa, Chairman & CEO, Altair
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
3
Innovation Intelligence®
27+Years of Innovation
40+Offices in 19 Countries
1800+Employees Worldwide
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
4
Altair Knows HPC
Altair is the only company that:
makes HPC tools…
develops HPC applications…
…and uses these to solve real HPC
problems
500 Altair engineers worldwide
use HPC every day for
real-world modeling
& simulation
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
5
Intel and Altair: Partners in HPC
A history of collaboration…
• Cluster Management: PBS-Intel integrations
• MPI integration
• Intel Cluster Checker
• Certifications: Intel Cluster-Ready
• PBS Professional
• Solvers (RADIOSS, OptiStruct, AcuSolve)
• Application Integration: Use of Intel tools and technologies
• Intel® MPI, Intel® Fortran & C++ compilers, Intel® MKL Library, Intel®
VTune™ Amplifier, Intel trace analyzer & collector
• Benchmarking activities on large cluster configurations
• Professional Support: Close technical collaboration
• Access to Intel hardware resources: SDV systems, large cluster
• Intel technical expertise helps us to optimize our software on Intel
systems
ICR award-winning
partner: 2011 and 2012
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
6
About RADIOSS
Compute-intensive simulation software for Manufacturing
• For 20+ years an established standard for automotive crash and impact
• Differentiated by its high scalability, quality and robustness
• Supports multiphysics simulation and advanced materials
• Used across all industries to improve safety and manufacturability
Companies use RADIOSS to simulate real-world scenarios (crash tests,
climate effects, etc.) to test the performance of a product
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
7
Key RADIOSS Feature: Hybrid MPP Model
 Highly parallel code
• Multi-level parallelization
• Domain decomposition MPI parallelization
• Multithreading OpenMP
 Enhanced performance
• Best scalability in the marketplace
• High efficiency on large HPC clusters
• Unique, proven method for rich scalability over thousands of cores for FEA
• Flexibility -- easy tuning of MPI & OpenMP
• Robustness -- parallel arithmetic allows perfect repeatability in parallel
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
About PBS Professional
• Market-leading job scheduler
• Policy-driven, tunable scheduling
• Dynamic OS provisioning
• GPU/co-processor scheduling (e.g. Xeon Phi)
• Only product with EAL3+ security certification
• Green Provisioning™ - Advanced Power Management
• Scalability to hundreds of thousands of cores
• Proven for 20+ years at thousands of sites
• Measurable performance and value
• Maximized utilization, throughput and time to results
• Other products cost more and deliver less
Schedule | Prioritize | Scale
“Without its flexibility, it
wouldn't have been able to
handle what we're doing.”
– NASA Ames
High-performance computing (HPC) resource and workload management
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
9
The Future of HPC: Altair on Intel® Xeon Phi™ coprocessors
• PBS Professional on Intel® Xeon Phi™ coprocessor
• Currently supported out of the box
• Altair offers a configuration toolkit that automates the process of configuring PBS
Professional in a Intel® Xeon Phi™ coprocessor environment
• RADIOSS on Intel® Xeon Phi™ coprocessor
• We have successfully ported RADIOSS using 2 programming models, offload for Implicit
solver and native for Explicit solver
• We are focusing on the development and optimization of RADIOSS Explicit using native
programing model
• Big benefit in Intel® Xeon® processor programming continuity
• Easy development process with encouraging results
Altair is one of the first ISVs to support software
on Intel® Xeon Phi™ coprocessors
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
PBS Professional: Xeon Phi™ Support
• PBS Professional matches workload to resources
• We configure PBS to consider the coprocessor
resource(s) during job scheduling
• PBS Professional records the usage of the Intel
Xeon Phi devices within the accounting logs
• E.g. how many Intel Xeon Phi devices and/or cores were
used
• Supports basic and advanced configurations
• Running single or multiple Intel® Xeon Phi™ coprocessor
jobs on a node
Technical white paper explains
how to manually configure PBS
Professional to support a basic or
advanced Xeon Phi configuration
A toolkit has also been created to
automatically configure PBS for
Xeon Phi
PBS Professional supports Intel® Xeon Phi™ coprocessor
out of the box
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
Offload Mode: Xeon Phi is used “like a GPU”
 Good single card performance with RADIOSS implicit
 Up to 2.5x faster than 12-core Intel Westmere
 Best suited for Implicit (same constraints as GPU)
Native Mode: Xeon Phi is used as a standalone
computing resource
 Milestone: First time RADIOSS Explicit Solver ported to coprocessor or accelerator – never
ported to GPU due to complexity
 Easy porting process – no source code changes (only –mmic added to makefile)
 Consistency of Intel compiler & tools allows incremental effort to tune for Xeon Phi
 Optimizations relevant on all Xeon platforms
 Flexible execution options:
 Running natively on one card, enables more efficient computing (host free for more tasks)
 Also enables heterogeneous computing (using host and one or more cards)
 See results data on next slides…
Porting RADIOSS on Xeon Phi: Summary of Work
Intel interview at Altair Xeon Phi SC12 demo
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
12
Live Demo: RADIOSS and PBS on Xeon Phi
• See RADIOSS running natively on Xeon Phi coprocessor
• PBS Professional schedules RADIOSS jobs to Xeon Phi coprocessor’s 50+ cores
• RADIOSS analyzes car crash simulation data on Xeon Phi -- help manufacturers identify design
issues to improve safety
• Resulting simulation is visualized in Altair HyperView (see below)
“Neon” 1-million
element frontal
crash simulation
benchmark –
viewed in
HyperView
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
13
2365
1925
1507
1152
0
500
1000
1500
2000
2500
1 MIC card 1 MIC card+host 2 MIC cards+host
12 MPI
30 MPI x 6 OpenMP
12 MPI x 20 OpenMP +
12 MPI
2 x 6 MPI x 30 OpenMP
+ 6 MPI x 2 OpenMP
RADIOSS Performance on Intel® Xeon Phi™
 33% performance improvement compared to original native version
 Single Xeon Phi card now faster than 12 Westmere CPU cores
 Heterogeneous computing enables computation using Xeon Phi and Xeon host*
 Over 1.5x improvement for 1 Xeon Phi card + host
 Over 2x improvement for 2 Xeon Phi cards + host
 Optimization tuning helps across all Xeon platforms
* Speedups for heterogeneous computing are given using Westmere development platform,
Lower
is
better
Elapsed time
Host only
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
14
Xeon Phi Development Advantages
 Simplified development
• No need to learn new language (like CUDA or OpenCL)
• Native porting not possible for GPU
 Can continue using preferred tools -- e.g.:
• Intel Fortran/C compiler for compilation and build
• Intel Vtune Amplifier and ITAC for tuning
 Performance improvements with reasonable effort
• Our developers are happy with performance gains relative to work required
• Optimizations can be used across all Xeon platforms
• Heterogeneous computing using MPI, both on host and Intel® Xeon Phi™ coprocessor,
further enhances global performance
 Responsive, helpful support team
• Intel helped Altair translate BLAS-like routines in terms of Xeon Phi offload
• Intel helped tune environment parameters to optimize performance
• Intel was there for us at every turn for support and advice
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
15
Value: Optimizing HPC for Users
• By running Altair HPC applications on Xeon Phi, we are ensuring our
users can run the most compute-intensive portion of their work on the
most cutting-edge, high-performance architecture available
• Improved performance and quality
• Get results faster
• Improve precision of results
• Be prepared to scale
• Improve ability to innovate
• Improved competitive advantage
• Reduce wait time for results – get to market faster
Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved.
16
For More Information
• PBS Professional now supports Xeon Phi
• http://www.pbsworks.com/Product.aspx?id=27
• RADIOSS availability:
• Xeon Phi Beta available in Q3 2013
• Beta will focus on RADIOSS v13.0
• Visit us online:
• www.altair.com
• www.hyperworks.com
• www.pbsworks.com

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Altair on Intel Xeon Phi: Optimizing HPC for Breakthrough Performance

  • 1. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 1 Innovation Intelligence® Altair on Intel® Xeon Phi™: Optimizing HPC For Breakthrough Performance Eric Lequiniou Director, High Performance Computing ISC’13  Leipzig, Germany
  • 2. “Our vision is to radically change the way organizations design products and make decisions.” – James R. Scapa, Chairman & CEO, Altair
  • 3. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 3 Innovation Intelligence® 27+Years of Innovation 40+Offices in 19 Countries 1800+Employees Worldwide
  • 4. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 4 Altair Knows HPC Altair is the only company that: makes HPC tools… develops HPC applications… …and uses these to solve real HPC problems 500 Altair engineers worldwide use HPC every day for real-world modeling & simulation
  • 5. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 5 Intel and Altair: Partners in HPC A history of collaboration… • Cluster Management: PBS-Intel integrations • MPI integration • Intel Cluster Checker • Certifications: Intel Cluster-Ready • PBS Professional • Solvers (RADIOSS, OptiStruct, AcuSolve) • Application Integration: Use of Intel tools and technologies • Intel® MPI, Intel® Fortran & C++ compilers, Intel® MKL Library, Intel® VTune™ Amplifier, Intel trace analyzer & collector • Benchmarking activities on large cluster configurations • Professional Support: Close technical collaboration • Access to Intel hardware resources: SDV systems, large cluster • Intel technical expertise helps us to optimize our software on Intel systems ICR award-winning partner: 2011 and 2012
  • 6. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 6 About RADIOSS Compute-intensive simulation software for Manufacturing • For 20+ years an established standard for automotive crash and impact • Differentiated by its high scalability, quality and robustness • Supports multiphysics simulation and advanced materials • Used across all industries to improve safety and manufacturability Companies use RADIOSS to simulate real-world scenarios (crash tests, climate effects, etc.) to test the performance of a product
  • 7. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 7 Key RADIOSS Feature: Hybrid MPP Model  Highly parallel code • Multi-level parallelization • Domain decomposition MPI parallelization • Multithreading OpenMP  Enhanced performance • Best scalability in the marketplace • High efficiency on large HPC clusters • Unique, proven method for rich scalability over thousands of cores for FEA • Flexibility -- easy tuning of MPI & OpenMP • Robustness -- parallel arithmetic allows perfect repeatability in parallel
  • 8. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. About PBS Professional • Market-leading job scheduler • Policy-driven, tunable scheduling • Dynamic OS provisioning • GPU/co-processor scheduling (e.g. Xeon Phi) • Only product with EAL3+ security certification • Green Provisioning™ - Advanced Power Management • Scalability to hundreds of thousands of cores • Proven for 20+ years at thousands of sites • Measurable performance and value • Maximized utilization, throughput and time to results • Other products cost more and deliver less Schedule | Prioritize | Scale “Without its flexibility, it wouldn't have been able to handle what we're doing.” – NASA Ames High-performance computing (HPC) resource and workload management
  • 9. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 9 The Future of HPC: Altair on Intel® Xeon Phi™ coprocessors • PBS Professional on Intel® Xeon Phi™ coprocessor • Currently supported out of the box • Altair offers a configuration toolkit that automates the process of configuring PBS Professional in a Intel® Xeon Phi™ coprocessor environment • RADIOSS on Intel® Xeon Phi™ coprocessor • We have successfully ported RADIOSS using 2 programming models, offload for Implicit solver and native for Explicit solver • We are focusing on the development and optimization of RADIOSS Explicit using native programing model • Big benefit in Intel® Xeon® processor programming continuity • Easy development process with encouraging results Altair is one of the first ISVs to support software on Intel® Xeon Phi™ coprocessors
  • 10. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. PBS Professional: Xeon Phi™ Support • PBS Professional matches workload to resources • We configure PBS to consider the coprocessor resource(s) during job scheduling • PBS Professional records the usage of the Intel Xeon Phi devices within the accounting logs • E.g. how many Intel Xeon Phi devices and/or cores were used • Supports basic and advanced configurations • Running single or multiple Intel® Xeon Phi™ coprocessor jobs on a node Technical white paper explains how to manually configure PBS Professional to support a basic or advanced Xeon Phi configuration A toolkit has also been created to automatically configure PBS for Xeon Phi PBS Professional supports Intel® Xeon Phi™ coprocessor out of the box
  • 11. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. Offload Mode: Xeon Phi is used “like a GPU”  Good single card performance with RADIOSS implicit  Up to 2.5x faster than 12-core Intel Westmere  Best suited for Implicit (same constraints as GPU) Native Mode: Xeon Phi is used as a standalone computing resource  Milestone: First time RADIOSS Explicit Solver ported to coprocessor or accelerator – never ported to GPU due to complexity  Easy porting process – no source code changes (only –mmic added to makefile)  Consistency of Intel compiler & tools allows incremental effort to tune for Xeon Phi  Optimizations relevant on all Xeon platforms  Flexible execution options:  Running natively on one card, enables more efficient computing (host free for more tasks)  Also enables heterogeneous computing (using host and one or more cards)  See results data on next slides… Porting RADIOSS on Xeon Phi: Summary of Work Intel interview at Altair Xeon Phi SC12 demo
  • 12. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 12 Live Demo: RADIOSS and PBS on Xeon Phi • See RADIOSS running natively on Xeon Phi coprocessor • PBS Professional schedules RADIOSS jobs to Xeon Phi coprocessor’s 50+ cores • RADIOSS analyzes car crash simulation data on Xeon Phi -- help manufacturers identify design issues to improve safety • Resulting simulation is visualized in Altair HyperView (see below) “Neon” 1-million element frontal crash simulation benchmark – viewed in HyperView
  • 13. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 13 2365 1925 1507 1152 0 500 1000 1500 2000 2500 1 MIC card 1 MIC card+host 2 MIC cards+host 12 MPI 30 MPI x 6 OpenMP 12 MPI x 20 OpenMP + 12 MPI 2 x 6 MPI x 30 OpenMP + 6 MPI x 2 OpenMP RADIOSS Performance on Intel® Xeon Phi™  33% performance improvement compared to original native version  Single Xeon Phi card now faster than 12 Westmere CPU cores  Heterogeneous computing enables computation using Xeon Phi and Xeon host*  Over 1.5x improvement for 1 Xeon Phi card + host  Over 2x improvement for 2 Xeon Phi cards + host  Optimization tuning helps across all Xeon platforms * Speedups for heterogeneous computing are given using Westmere development platform, Lower is better Elapsed time Host only
  • 14. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 14 Xeon Phi Development Advantages  Simplified development • No need to learn new language (like CUDA or OpenCL) • Native porting not possible for GPU  Can continue using preferred tools -- e.g.: • Intel Fortran/C compiler for compilation and build • Intel Vtune Amplifier and ITAC for tuning  Performance improvements with reasonable effort • Our developers are happy with performance gains relative to work required • Optimizations can be used across all Xeon platforms • Heterogeneous computing using MPI, both on host and Intel® Xeon Phi™ coprocessor, further enhances global performance  Responsive, helpful support team • Intel helped Altair translate BLAS-like routines in terms of Xeon Phi offload • Intel helped tune environment parameters to optimize performance • Intel was there for us at every turn for support and advice
  • 15. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 15 Value: Optimizing HPC for Users • By running Altair HPC applications on Xeon Phi, we are ensuring our users can run the most compute-intensive portion of their work on the most cutting-edge, high-performance architecture available • Improved performance and quality • Get results faster • Improve precision of results • Be prepared to scale • Improve ability to innovate • Improved competitive advantage • Reduce wait time for results – get to market faster
  • 16. Copyright © 2013 Altair Engineering, Inc. Proprietary and Confidential. All rights reserved. 16 For More Information • PBS Professional now supports Xeon Phi • http://www.pbsworks.com/Product.aspx?id=27 • RADIOSS availability: • Xeon Phi Beta available in Q3 2013 • Beta will focus on RADIOSS v13.0 • Visit us online: • www.altair.com • www.hyperworks.com • www.pbsworks.com