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Ecological Analyses Using BOLD Sarah Adamowicz, Assistant Professor Biodiversity Institute of Ontario & Dept. Integrative Biology University of Guelph
1- Managing and co-analyzing multiple types of data 2- Studying biological, habitat, and geographical  associations 3- Accessing published data and co-analyzing published data with your own 4- Accumulation curves and biodiversity inventories 5- Using BINs as proxies for species in ecological research  Types of Ecological Analyses BOLD Can Facilitate
[object Object],[object Object],[object Object],[object Object],1- Managing and co-analyzing multiple types of data
BOLD Systems – Data Analysis
2- Studying Biological Associations,  e.g. between caterpillars and host plants
Smith M. A. et.al. PNAS 2008;105:12359-12364 Host Specialists or Generalists?
[object Object],[object Object],[object Object],Using BOLD to Study Associations
Diptera Larvae from Churchill Extra Info: Type of Pond
Churchill Mites Collected from Different Substrates Extra Info: Lichen Types
3- Accessing published data  and co-analyzing published data with your own ,[object Object],[object Object],[object Object],[object Object]
 
 
Churchill Northern Studies Centre Sub Arctic Low Arctic High Arctic 4- Using BOLD to Inform Biodiversity Surveys The Case of Churchill, Manitoba, Canada
Species Accumulation Curve Tool Available in BOLD Insect Orders Marine Taxa Number of Individuals Number of Species/Clusters
Species Accumulation Curve Tool Available in BOLD Insect Orders Marine Taxa Number of Individuals Number of Species/Clusters
Zhou et al. 2009. Frontiers in Zoology. 6, 30. Similar trends often shown when biodiversity quantified in different ways  Accumulation of EPT Diversity in Churchill Trichoptera Ephemeroptera Plecoptera Barcode Clusters Phylogenetic Diversity Morphospecies Number of Individuals
 
[object Object],[object Object],[object Object]
5- Barcode clusters can be used as proxies for species for many types of ecological analyses ,[object Object],[object Object],[object Object],[object Object],Jinjing Wang et al., in review Amateur Expert
6- Phylogenetic structure offers insight into ecological mechanisms Clustered Phylogeny Overdispersed Phylogeny ,[object Object],[object Object],[object Object]
 

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Dr Sarah Adamowicz - Ecological studies

  • 1. Ecological Analyses Using BOLD Sarah Adamowicz, Assistant Professor Biodiversity Institute of Ontario & Dept. Integrative Biology University of Guelph
  • 2. 1- Managing and co-analyzing multiple types of data 2- Studying biological, habitat, and geographical associations 3- Accessing published data and co-analyzing published data with your own 4- Accumulation curves and biodiversity inventories 5- Using BINs as proxies for species in ecological research Types of Ecological Analyses BOLD Can Facilitate
  • 3.
  • 4. BOLD Systems – Data Analysis
  • 5. 2- Studying Biological Associations, e.g. between caterpillars and host plants
  • 6. Smith M. A. et.al. PNAS 2008;105:12359-12364 Host Specialists or Generalists?
  • 7.
  • 8. Diptera Larvae from Churchill Extra Info: Type of Pond
  • 9. Churchill Mites Collected from Different Substrates Extra Info: Lichen Types
  • 10.
  • 11.  
  • 12.  
  • 13. Churchill Northern Studies Centre Sub Arctic Low Arctic High Arctic 4- Using BOLD to Inform Biodiversity Surveys The Case of Churchill, Manitoba, Canada
  • 14. Species Accumulation Curve Tool Available in BOLD Insect Orders Marine Taxa Number of Individuals Number of Species/Clusters
  • 15. Species Accumulation Curve Tool Available in BOLD Insect Orders Marine Taxa Number of Individuals Number of Species/Clusters
  • 16. Zhou et al. 2009. Frontiers in Zoology. 6, 30. Similar trends often shown when biodiversity quantified in different ways Accumulation of EPT Diversity in Churchill Trichoptera Ephemeroptera Plecoptera Barcode Clusters Phylogenetic Diversity Morphospecies Number of Individuals
  • 17.  
  • 18.
  • 19.
  • 20.
  • 21.  

Editor's Notes

  1. * Rough idea of Canadian interest (Suz)