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Caveats and Comments
1
Overview:
This is my analysis, not Stanford’s. My goal is to understand the trajectory of COVID. It is not confidential and can be freely shared. The R program code is
available at https://github.com/StevenLShafer/COVID19/. The daily analysis are available at https://1drv.ms/u/s!AuOyHP_aTIy7rowrt2AjGpWm_frnEQ?e=KBcNbh.
You are welcome to use the R code on GitHub for any purpose.
I am attempting to keep the analysis and commentary apolitical. I am now including partisan lean as a metric to help understand the epidemic. I occasionally point
out misrepresentations by government officials. I occasionally point out where government recommendations have placed Americans at increasing risk.
I try to provide a daily update in the morning, except Sundays. My analysis my be delayed by my clinical responsibilities as a Stanford anesthesiologist.
There is a lot of information on the figures. If something isn’t clear, please see the explanation on slide 2.
Data sources:
• USA Case Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_confirmed_US.csv
• USA Death Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_deaths_US.csv
• USA Testing and Hospitalization Data: https://raw.githubusercontent.com/COVID19Tracking/covid-tracking-data/master/data/states_daily_4pm_et.csv
• Global Case Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_confirmed_global.csv
• Global Death Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_deaths_global.csv
• Global Testing Data: https://raw.githubusercontent.com/owid/covid-19-data/master/public/data/owid-covid-data.csv
• Mobility Data: https://www.gstatic.com/covid19/mobility/Global_Mobility_Report.csv
• Partisan Lean: MIT Election Data and Science Lab: https://doi.org/10.7910/DVN/VOQCHQ/HEIJCQ
• Ensemble Model: https://github.com/reichlab/covid19-forecast-hub/raw/master/data-processed/COVIDhub-ensemble/2020-xx-xx-COVIDhub-ensemble.csv
Models:
1. Future projections of case numbers are based on the Gompertz function (https://en.wikipedia.org/wiki/Gompertz_function): log 𝑐𝑢𝑚𝑢𝑙𝑎𝑡𝑖𝑣𝑒 𝑐𝑎𝑠𝑒𝑠 =
𝑐𝑢𝑟𝑟𝑒𝑛𝑡 𝑐𝑎𝑠𝑒𝑠 + 𝑚𝑎𝑥𝑖𝑚𝑢𝑚 𝑐𝑎𝑠𝑒𝑠 − 𝑐𝑢𝑟𝑟𝑒𝑛𝑡 𝑐𝑎𝑠𝑒𝑠 1 − 𝑒−𝑘 𝑡 . This is a naïve asymptotic model. k is the rate constant, such that log(2) / k = time to 50%
rise. t is the number of days. Wikipedia The Gompertz function is estimated from the last 3 weeks of data for cumulative cases (red dots in the figures).
Deaths are predicted from a log linear regression of deaths over the past 21 days. For the US, and individual states, I am also including the 98% prediction
interval from the COVID-19 Forecast Hub (https://covid19forecasthub.org/).
2. The rate of change in daily cases and deaths is the slope of delta cases / day over the last 14 days, divided by the average number of cases.
Locations
The locations for the modeling are where Pamela and I have family and friends, locations of interest to friends and colleagues, or countries in the news (e.g.,
China, South Korea, Sweden, Brazil) or with significant economic impact on the United States (e.g., Japan, Canada, Mexico). Locations are easy to add.
Stay safe, well, resilient, and kind.
Steve Shafer
steven.shafer@Stanford.edu
2,586,092
152,804
1
10
100
1,000
10,000
100,000
1,000,000
10,000,000
100,000,000
Actual(points)/Predicted(line)
Phase
Pre-Model
Modeled
Deaths
Tests
USA projection as of 2020-05-27
0
10,000
20,000
30,000
0
2,000
4,000
6,000
Cases/Day
Deaths/Day
Cases: 1,662,302 (32,123) -- Deaths: 98,220 (829) -- Case Mortality: 5.9% -- Daily Change in Cases: -0.5%
Explanation of the Figures
2
Brown dots:
cumulative tests
Red dots: cumulative cases
used to estimate Gompertz
function, presently set to last
3 weeks
Red line: predicted cumulative
cases based on the Gompertz
function estimated from the red
dots
Red number: total cases
on June 30th, based on
the Gompertz function
estimated from the red
dots
Black number: total
Deaths on July 31th,
based on log-linear
regression of the past
21 days
Black line: predicted
cumulative deaths, based
on a log linear regression
of deaths over past 21
days.
Axis for deaths / day, usually
1/10th of the axis for cases /
day on the left side of the
figure.
Green line: linear regression
over 8 days, used to calculate
percent increase / decrease
(see below)
Daily change in cases,
calculated as the slope of the
green line (above left) /
number of new cases
yesterday.
Case mortality:
cumulative deaths
/ cumulative cases.
Cases / day calculated
from cumulative cases
used to estimate the
Gompertz function
Cases / day calculated
from cumulative cases
not used to estimate the
Gompertz function
Deaths / day,
axis is on the left
Blue line: today
Blue dots: cumulative cases not
used to estimate Gompertz
function
Cumulative cases
(yesterday’s cases)
and cumulative deaths
(yesterday’s deaths)
Axis for cases / day.
Axis for deaths / day
appears to the right.
Geographic
location
Date of analysis,
also shown as
blue vertical line
below
Purple wedge: 98% ensemble
prediction interval from COVID-19
Forecast Hub (USA and US
States only)
Worldwide
33,280,849
1,058,172
1
10
100
1,000
10,000
100,000
1,000,000
10,000,000
100,000,000
Cumulative
Phase
Pre-Model
Modeled
Deaths
Worldwide projection as of 2020-09-02
0
100,000
200,000
300,000
0
5,000
10,000
15,000
Cases/Day
Deaths/Day
Cases: 25,748,911 (264,875) -- Deaths: 856,999 (6,480) -- Case Mortality: 3.3% -- Daily Change: +0.3% Cases, -0.5% Deaths
2020-09-02 Summary: 3
USA
7,274,416
217,487
1
10
100
1,000
10,000
100,000
1,000,000
10,000,000
100,000,000
Cumulative
Phase
Pre-Model
Modeled
Deaths
Tests
USA projection as of 2020-09-02
Mother'sDay
MemorialDay
July4th
July15,20200
20,000
40,000
60,000
0
1,000
2,000
3,000
Cases/Day
Deaths/Day
Cases: 6,073,840 (43,253) -- Deaths: 184,664 (1,067) -- Case Mortality: 3.0% -- Daily Change: -0.8% Cases, -1.4% Deaths
2020-09-02 Summary: 4
Non-authoritarian Asian ensemble
133,883
2,260
1
10
100
1,000
10,000
100,000
1,000,000
10,000,000
100,000,000
Cumulative
Phase
Pre-Model
Modeled
Deaths
Tests
Japan, South Korea, Thailand, and Vietnam (Population = 328 MM)
Non-authoritarian Asian ensemble projection as of 2020-09-02
0
500
1,000
1,500
0
20
40
60
80
Cases/Day
Deaths/Day
Cases: 93,941 (902) -- Deaths: 1,731 (17) -- Case Mortality: 1.8% -- Daily Change: -3.1% Cases, +2.1% Deaths
2020-09-02 Summary: 5
Western Europe
2,213,302
156,962
1
10
100
1,000
10,000
100,000
1,000,000
10,000,000
100,000,000
Cumulative
Phase
Pre-Model
Modeled
Deaths
Tests
Belgium, France, Germany, Greece, Italy, Portugal, Spain, Netherlands, Luxembourg, and the UK (Population = 344MM)
Western Europe projection as of 2020-09-02
0
20,000
40,000
60,000
0
1,000
2,000
3,000
Cases/Day
Deaths/Day
Cases: 1,790,600 (17,586) -- Deaths: 154,627 (113) -- Case Mortality: 8.6% -- Daily Change: +3.2% Cases, -0.6% Deaths
2020-09-02 Summary: 6
Worldwide cases
USA
BRA
IND
RUS
PER
ZAF
COL
MEX
ESP
ARG
CHL
IRN
GBR
SAU
BGD
FRA
PAK
TUR
ITA
DEU
IRQ
PHL
IDN
CAN
UKR
ISR
BOL
ECU
KAZ
EGY
DOM
CHN
ROU
BEL
SWE
GTM
NLD
BLR
JPN
POL
MAR
HND
PRT
NGA
ETH
VEN
DZA
GHA
KGZ
CHE
UZB
NPL
AFG
AZE
KEN
SRB
AUT
AUS
SLV
CZE
KOR
CMR
PRY
CIV
DNK
USA
0
2,000,000
4,000,000
6,000,000
1 6 11 16 21 26 31 36 41 46 51 56 61 66
Rank
Totalcasestodate
Worldwide cases
Excludes countries with population < 5,000,000
2020-09-02 Summary: 7
Worldwide cases
CHL
PER
BRA
USA
ISR
COL
ZAF
BOL
ESP
SAU
ARG
DOM
SWE
KGZ
HND
BEL
ECU
IRQ
BLR
RUS
KAZ
IRN
GTM
GBR
CHE
MEX
PRT
FRA
ITA
AZE
NLD
SRB
ROU
CAN
SLV
TUR
AUT
IND
DNK
DEU
UKR
PRY
CZE
LBY
PHL
BGR
BGD
GHA
MAR
VEN
POL
PAK
FIN
UZB
NPL
AFG
DZA
AUS
EGY
TJK
ZMB
CMR
SEN
GRC
GIN
USA
None
1 in 200
1 in 100
1 in 67
1 in 50
1 in 40
1 6 11 16 21 26 31 36 41 46 51 56 61 66
Rank
Totalcasestodate
Worldwide cases
Excludes countries with population < 5,000,000
2020-09-02 Summary: 8
Average new cases over past 7 days
PER
ISR
ARG
BRA
ESP
COL
USA
IRQ
CHL
HND
BOL
PRY
FRA
LBY
IND
GTM
ROU
ECU
MEX
UKR
DOM
ZAF
BEL
CHE
PHL
MAR
CZE
SAU
VEN
NPL
RUS
NLD
AUT
IRN
PRT
GBR
ITA
GRC
TUR
KGZ
BGR
POL
SLV
AZE
BLR
ETH
SWE
DNK
DEU
BGD
CAN
HUN
SRB
ZMB
SVK
TUN
UZB
IDN
DZA
RWA
JOR
KAZ
NIC
KOR
SEN
USA
None
1 in 20,000
1 in 10,000
1 in 6,667
1 in 5,000
1 in 4,000
1 in 3,333
1 6 11 16 21 26 31 36 41 46 51 56 61 66
Rank
Averagecases/day
Average new cases over past 7 days
Excludes countries with population < 5,000,000
2020-09-02 Summary: 9
Worldwide deaths
USA
BRA
IND
MEX
GBR
ITA
FRA
ESP
PER
IRN
COL
RUS
ZAF
CHL
BEL
DEU
CAN
ARG
IDN
IRQ
ECU
TUR
PAK
NLD
SWE
EGY
BOL
CHN
BGD
SAU
ROU
PHL
GTM
UKR
POL
CHE
HND
PRT
DOM
KAZ
DZA
AFG
JPN
MAR
KGZ
NGA
ISR
ETH
SDN
AUT
SLV
SRB
BLR
AUS
BGR
DNK
HUN
KEN
YEM
AZE
CZE
CMR
VEN
PRY
FIN
USA
0
50,000
100,000
150,000
200,000
1 6 11 16 21 26 31 36 41 46 51 56 61 66
Rank
Totaldeathstodate
Worldwide deaths
Excludes countries with population < 5,000,000
2020-09-02 Summary: 10
Worldwide deaths
PER
BEL
ESP
GBR
CHL
SWE
BRA
ITA
MEX
USA
BOL
FRA
ECU
COL
NLD
IRN
ZAF
CAN
CHE
HND
IRQ
ARG
GTM
KGZ
DOM
PRT
ROU
SAU
ISR
RUS
DEU
DNK
KAZ
SLV
SRB
AUT
BGR
TUR
BLR
EGY
AZE
FIN
HUN
UKR
IND
POL
PRY
AFG
DZA
CZE
LBY
PHL
PAK
MAR
SDN
IDN
AUS
BGD
GRC
ZMB
NIC
YEM
HTI
CMR
SEN
USA
None
1 in 5,000
1 in 2,500
1 in 1,667
1 in 1,250
1 in 1,000
1 6 11 16 21 26 31 36 41 46 51 56 61 66
Rank
Totaldeathstodate
Worldwide deaths
Excludes countries with population < 5,000,000
2020-09-02 Summary: 11
Average daily deaths over past 7 days
BOL
COL
PER
MEX
ARG
BRA
HND
CHL
USA
ZAF
IRQ
PRY
DOM
ECU
ROU
ISR
IRN
GTM
KAZ
BGR
SAU
SLV
MAR
UKR
ESP
LBY
IND
AUS
RUS
PHL
BLR
ZWE
TUR
IDN
NPL
GRC
POL
PRT
BGD
DZA
AZE
FRA
VEN
NLD
EGY
SRB
ETH
UZB
CAN
NIC
CHE
GBR
SYR
CZE
JPN
SEN
ITA
TUN
ZMB
MDG
HTI
AGO
YEM
AFG
KEN
USA
None
1 in 500,000
1 in 250,000
1 in 166,667
1 in 125,000
1 6 11 16 21 26 31 36 41 46 51 56 61 66
Rank
Averagedeaths/day
Average daily deaths over past 7 days
Excludes countries with population < 5,000,000
2020-09-02 Summary: 12
Mortality Trends
0
2
4
6
8
10
12
14
USCaseRateMortality
Mortality Type:
13 day rolling median
Cumulative
Daily Raw
Daily vs. Cumulative US Case Rate Mortality
Last week excluded because deaths are often backdated
2020-09-02 Summary: 13
Change in New Cases per Day
New cases are:
Increasing > +3%
Increasing between +1% and +3%
No Change (-1% to +1%)
Decreasing between -1% and -3%
Decreasing > -3%
New cases by state as of 2020-09-02
2020-09-02 Summary: 14
Cases as a Percent of Peak Cases
HI TX FL
OK LA MS AL GA
AZ NM KS AR TN NC SC DC
CA UT CO NE MO KY WV VA MD DE
OR NV WY SD IA IN OH PA NJ CT RI
WA ID MT ND MN IL MI NY MA
WI VT NH
AK ME
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
PercentofPeak
Daily Cases as a Percent of Peak Cases
2020-09-02 Summary: 15
Change in New Deaths per Day
New deaths are:
Increasing > +0.5%
Increasing between +0.1% and +0.5%
No Change (-0.1% to +0.1%)
Decreasing between -0.1% and -0.5%
Decreasing > -0.5%
New deaths by state as of 2020-09-02
2020-09-02 Summary: 16
Deaths as a Percent of Peak Deaths
HI TX FL
OK LA MS AL GA
AZ NM KS AR TN NC SC DC
CA UT CO NE MO KY WV VA MD DE
OR NV WY SD IA IN OH PA NJ CT RI
WA ID MT ND MN IL MI NY MA
WI VT NH
AK ME
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
0
25
50
75
100
PercentofPeak
Daily Deaths as a Percent of Peak Deaths
2020-09-02 Summary: 17
Change in cases vs change in deaths
AL
AK
AZ
AR
CA
CO
CT
DEDC
FL
GA
HI
ID
IL
IN
IAKS
KY
LA
ME
MD
MA
MI
MN
MS
MO
MT
NE
NV
NH NJ
NM
NY
NC
ND
OH
OK
OR
PA
RI
SC
SD
TN
TX
UT
VT
VA
WA
WV
WI
WY-6
-3
0
3
6
-5.0 -2.5 0.0 2.5 5.0
Change in cases (%/day)
Changeindeaths(%/day)
Change in cases vs change in deaths over last 14 days as of 2020-09-02
2020-09-02 Summary: 18
Total US COVID-19 Cases
CA
TX
FL
NY
GA
IL
AZ
NJ
NC
TN
LA
PA
MA
AL
OH
VA
SC
MI
MD
IN
MO
MS
WI
MN
WA
NV
IA
AR
OK
CO
CT
UT
KY
KS
NE
ID
OR
NM
RI
DE
DC
SD
ND
WV
HI
MT
NH
AK
ME
WY
VT
0
200,000
400,000
600,000
800,000
1 6 11 16 21 26 31 36 41 46 51
Rank
Totalcases
Masks
No
Yes
Governor
aa
Democratic
Republican
Total US COVID-19 Cases
p masks as of July 20, 2020: 0.42, p governor: 0.79. NB: association != causation.
2020-09-02 Summary: 19
Total US COVID-19 Cases
LA
FL
MS
AZ
AL
GA
SC
TN
NV
NY
TX
NJ
IA
RI
AR
DC
IL
MA
CA
ID
DE
MD
NE
UT
NC
ND
SD
OK
CT
KS
VA
MO
IN
MN
WI
NM
MI
KY
PA
OH
CO
WA
AK
MT
WY
OR
HI
WV
NH
ME
VT
None
1 in 100
1 in 50
1 in 33
1 6 11 16 21 26 31 36 41 46 51
Rank
TotalCases
Masks
No
Yes
Governor
aa
Democratic
Republican
Total US COVID-19 Cases
p masks as of July 20, 2020: 0.79, p governor: 0.1. NB: association != causation.
2020-09-02 Summary: 20
Average US COVID-19 cases over the past
7 days
IA
SD
ND
AL
MS
TN
MO
GA
AR
KS
OK
SC
TX
HI
FL
NE
ID
NC
IL
KY
NV
LA
IN
MN
CA
WI
MT
UT
VA
OH
MD
WV
AK
RI
MI
DE
DC
AZ
WA
WY
NM
OR
CO
PA
MA
NJ
CT
NY
ME
NH
VT
None
1 in 10,000
1 in 5,000
1 in 3,333
1 in 2,500
1 6 11 16 21 26 31 36 41 46 51
Rank
NewCases/Day
Masks
No
Yes
Governor
aa
Democratic
Republican
Average US COVID-19 cases over the past 7 days
p masks as of July 20, 2020: 0.0066, p governor: 0.0042. NB: association != causation.
2020-09-02 Summary: 21
Total US COVID-19 Deaths
NY
NJ
CA
TX
FL
MA
IL
PA
MI
GA
AZ
LA
CT
OH
MD
IN
SC
NC
VA
MS
AL
CO
WA
MN
TN
MO
NV
WI
IA
RI
KY
AR
OK
NM
DC
DE
OR
KS
NH
UT
NE
ID
WV
SD
ND
ME
MT
HI
VT
AK
WY
0
10,000
20,000
30,000
1 6 11 16 21 26 31 36 41 46 51
Rank
TotalDeaths
Masks
No
Yes
Governor
aa
Democratic
Republican
Total US COVID-19 Deaths
p masks as of July 20, 2020: 0.062, p governor: 0.23. NB: association != causation.
2020-09-02 Summary: 22
Total US COVID-19 Deaths
NJ
NY
MA
CT
LA
RI
DC
MS
AZ
MI
IL
MD
DE
PA
GA
SC
FL
IN
AL
TX
NV
NM
OH
IA
CO
CA
MN
NH
VA
AR
NC
TN
MO
WA
KY
NE
ID
OK
WI
ND
SD
KS
UT
WV
OR
MT
ME
VT
WY
AK
HI
None
1 in 2,000
1 in 1,000
1 in 667
1 in 500
1 6 11 16 21 26 31 36 41 46 51
Rank
TotalDeaths
Masks
No
Yes
Governor
aa
Democratic
Republican
Total US COVID-19 Deaths
p masks as of July 20, 2020: 0.029, p governor: 0.26. NB: association != causation.
2020-09-02 Summary: 23
Average US COVID-19 deaths over the past
7 days
MS
GA
SC
LA
FL
TX
AR
AZ
NV
AL
ID
TN
WV
IA
CA
OH
OK
NC
NM
MO
HI
MA
VA
KY
RI
IL
MT
IN
MD
ND
OR
MI
MN
AK
PA
KS
WI
WA
NE
SD
UT
NY
CO
DC
NH
CT
DE
NJ
ME
VT
WY
None
1 in 500,000
1 in 250,000
1 in 166,667
1 in 125,000
1 in 100,000
1 6 11 16 21 26 31 36 41 46 51
Rank
Deaths/Day
Masks
No
Yes
Governor
aa
Democratic
Republican
Average US COVID-19 deaths over the past 7 days
p masks as of July 20, 2020: 0.65, p governor: 0.035. NB: association != causation.
2020-09-02 Summary: 24
Daily testing trends
HI TX FL
OK LA MS AL GA
AZ NM KS AR TN NC SC DC
CA UT CO NE MO KY WV VA MD DE
OR NV WY SD IA IN OH PA NJ CT RI
WA ID MT ND MN IL MI NY MA
WI VT NH
AK ME
min
max
min
max
min
max
min
max
min
max
min
max
min
max
min
max
Dailytestingfrommintomax
Daily testing trends from min to max
Line = Friedman's supersmoother
2020-09-02 Summary: 25
Change in daily tests over past 14 days
VT
ME
AK
UT
MA
HI
MI
OH
CT
NC
NH
IL
WV
AR
IN
KS
WY
NY
WA
ND
MT
AL
MS
RI
NJ
KY
IA
OK
SD
MN
DC
NE
PA
MD
CA
OR
MO
CO
VA
ID
DE
NM
GA
TX
WI
AZ
LA
SC
TN
FL
NV
-2.0
0.0
2.0
4.0
6.0
1 6 11 16 21 26 31 36 41 46 51
Rank
Changeindailytests(%/day)
Masks
No
Yes
Governor
aa
Democratic
Republican
Change in daily tests over past 14 days
p masks as of July 20, 2020: 0.66, p governor: 0.93. NB: association != causation.
2020-09-02 Summary: 26
Percent Tested
AK
NY
DC
LA
NM
CT
TN
IL
NJ
CA
MI
ND
RI
MA
DE
WV
AR
MT
OK
GA
VT
MD
NC
FL
WI
UT
MN
ME
IA
AL
NV
OH
MS
WA
NE
VA
KY
SC
TX
SD
AZ
MO
IN
NH
ID
KS
HI
OR
WY
PA
CO
0
20
40
1 6 11 16 21 26 31 36 41 46 51
Rank
PercentTested
Masks
No
Yes
Governor
aa
Democratic
Republican
Percent Tested
p masks as of July 20, 2020: 0.057, p governor: 0.29. NB: association != causation.
2020-09-02 Summary: 27
Percent of Positive COVID Tests
AZ
MS
FL
AL
SC
ID
TX
NV
GA
KS
IA
NE
SD
IN
MO
AR
MD
PA
CO
RI
UT
LA
VA
NC
DE
MA
TN
MN
NJ
OK
WI
CA
ND
KY
IL
OH
NY
WA
WY
DC
OR
CT
HI
MI
NH
NM
MT
WV
ME
AK
VT
0.0
5.0
10.0
15.0
1 6 11 16 21 26 31 36 41 46 51
Rank
PercentofPositiveTests
Masks
No
Yes
Governor
aa
Democratic
Republican
Percent of Positive COVID Tests
p masks as of July 20, 2020: 0.045, p governor: 0.0058. NB: association != causation.
2020-09-02 Summary: 28
Positive fraction trends
HI TX FL
OK LA MS AL GA
AZ NM KS AR TN NC SC DC
CA UT CO NE MO KY WV VA MD DE
OR NV WY SD IA IN OH PA NJ CT RI
WA ID MT ND MN IL MI NY MA
WI VT NH
AK ME
min
max
min
max
min
max
min
max
min
max
min
max
min
max
min
max
Fractionpositivefrommintomax
Positive fraction trends from min to max
2020-09-02 Summary: 29
Change in positive tests over past 14 days
HI
ND
SD
IA
MO
KY
OK
AL
MN
WI
KS
SC
NV
AK
UT
MS
MT
OR
NE
ID
AR
TX
WV
FL
IN
NC
TN
VA
CA
GA
WA
NM
LA
PA
CO
IL
AZ
DE
RI
MD
MI
OH
NH
NJ
DC
WY
NY
VT
MA
CT
ME
-1.0
0.0
1.0
2.0
1 6 11 16 21 26 31 36 41 46 51
Rank
Changeinpositivetests(%/day)
Masks
No
Yes
Governor
aa
Democratic
Republican
Change in positive tests over past 14 days
p masks as of July 20, 2020: 0.014, p governor: 0.092. NB: association != causation.
2020-09-02 Summary: 30
Change in tests vs change in positive tests
AL
AK
AZ
AR
CA
CO
CT
DE
DC
FL
GA
HI
ID
IL
IN
IA
KS
KY
LA
ME
MD
MA
MI
MN
MS
MO
MTNE
NV
NH
NJ
NM
NY
NC
ND
OH
OK
OR
PA
RI
SC
SD
TN
TX
UT
VT
VA
WA
WV
WI
WY
-1
0
1
2
-2 0 2 4
Change in tests (%/day)
Changeinpositivetests(%/day)
Change in tests vs change in positive tests last 14 days as of 2020-09-02
Size of the state font reflects the number of deaths over the past 7 days.
2020-09-02 Summary: 31
Current hospitalizations as a percent of peak
since FebruaryHI
MO
MT
ND
WV
KS
AK
NE
OK
WY
SD
KY
ID
NC
IA
AR
GA
OH
VA
TN
MS
AL
IN
WA
CA
NV
SC
MN
UT
OR
WI
LA
FL
TX
IL
NM
RI
MD
CO
AZ
DE
VT
MI
PA
DC
ME
MA
NJ
NH
CT
NY
0
30
60
90
1 6 11 16 21 26 31 36 41 46 51
Rank
Hospitalizations(%ofpeak)
Masks
No
Yes
Governor
aa
Democratic
Republican
Current hospitalizations as a percent of peak since February
p masks as of July 20, 2020: 0.01, p governor: 0.042. NB: association != causation.
2020-09-02 Summary: 32
Hospitalizations trends
HI TX FL
OK LA MS AL GA
AZ NM KS AR TN NC SC DC
CA UT CO NE MO KY WV VA MD DE
OR NV WY SD IA IN OH PA NJ CT RI
WA ID MT ND MN IL MI NY MA
WI VT NH
AK ME
min
max
min
max
min
max
min
max
min
max
min
max
min
max
min
max
Hospitalizationsfrommintomax
Hospitalizations trends from min to max
2020-09-02 Summary: 33
Change in hospitalizations over past 14
days
DE
HI
MT
SD
ND
NE
IA
CT
KS
WV
MO
NJ
MN
OK
MI
IN
RI
IL
GA
WY
ID
NC
DC
KY
AK
PA
VA
WA
OH
MA
NY
TN
CO
AR
MD
ME
WI
AL
SC
CA
UT
LA
OR
MS
NV
VT
FL
TX
AZ
NM
NH
-5.0
-2.5
0.0
2.5
1 6 11 16 21 26 31 36 41 46 51
Rank
Changeinhospitalizations(%/day)
Masks
No
Yes
Governor
aa
Democratic
Republican
Change in hospitalizations over past 14 days
p masks as of July 20, 2020: 0.81, p governor: 0.44. NB: association != causation.
2020-09-02 Summary: 34
Change in New Cases per Day
Direction
Increasing > +2%
Increasing between +0.5% and +2%
No Change (-0.5% to +0.5%)
Decreasing between -0.5% and -2%
Decreasing > -2%
NA
Trends by county as of 2020-09-02
NA = Inadequate data
2020-09-02 Summary: 35

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COVID-19 Update (Summary): September 2, 2020

  • 1. Caveats and Comments 1 Overview: This is my analysis, not Stanford’s. My goal is to understand the trajectory of COVID. It is not confidential and can be freely shared. The R program code is available at https://github.com/StevenLShafer/COVID19/. The daily analysis are available at https://1drv.ms/u/s!AuOyHP_aTIy7rowrt2AjGpWm_frnEQ?e=KBcNbh. You are welcome to use the R code on GitHub for any purpose. I am attempting to keep the analysis and commentary apolitical. I am now including partisan lean as a metric to help understand the epidemic. I occasionally point out misrepresentations by government officials. I occasionally point out where government recommendations have placed Americans at increasing risk. I try to provide a daily update in the morning, except Sundays. My analysis my be delayed by my clinical responsibilities as a Stanford anesthesiologist. There is a lot of information on the figures. If something isn’t clear, please see the explanation on slide 2. Data sources: • USA Case Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_confirmed_US.csv • USA Death Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_deaths_US.csv • USA Testing and Hospitalization Data: https://raw.githubusercontent.com/COVID19Tracking/covid-tracking-data/master/data/states_daily_4pm_et.csv • Global Case Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_confirmed_global.csv • Global Death Data: https://github.com/CSSEGISandData/COVID-19/raw/master/csse_covid_19_data/csse_covid_19_time_series/time_series_covid19_deaths_global.csv • Global Testing Data: https://raw.githubusercontent.com/owid/covid-19-data/master/public/data/owid-covid-data.csv • Mobility Data: https://www.gstatic.com/covid19/mobility/Global_Mobility_Report.csv • Partisan Lean: MIT Election Data and Science Lab: https://doi.org/10.7910/DVN/VOQCHQ/HEIJCQ • Ensemble Model: https://github.com/reichlab/covid19-forecast-hub/raw/master/data-processed/COVIDhub-ensemble/2020-xx-xx-COVIDhub-ensemble.csv Models: 1. Future projections of case numbers are based on the Gompertz function (https://en.wikipedia.org/wiki/Gompertz_function): log 𝑐𝑢𝑚𝑢𝑙𝑎𝑡𝑖𝑣𝑒 𝑐𝑎𝑠𝑒𝑠 = 𝑐𝑢𝑟𝑟𝑒𝑛𝑡 𝑐𝑎𝑠𝑒𝑠 + 𝑚𝑎𝑥𝑖𝑚𝑢𝑚 𝑐𝑎𝑠𝑒𝑠 − 𝑐𝑢𝑟𝑟𝑒𝑛𝑡 𝑐𝑎𝑠𝑒𝑠 1 − 𝑒−𝑘 𝑡 . This is a naïve asymptotic model. k is the rate constant, such that log(2) / k = time to 50% rise. t is the number of days. Wikipedia The Gompertz function is estimated from the last 3 weeks of data for cumulative cases (red dots in the figures). Deaths are predicted from a log linear regression of deaths over the past 21 days. For the US, and individual states, I am also including the 98% prediction interval from the COVID-19 Forecast Hub (https://covid19forecasthub.org/). 2. The rate of change in daily cases and deaths is the slope of delta cases / day over the last 14 days, divided by the average number of cases. Locations The locations for the modeling are where Pamela and I have family and friends, locations of interest to friends and colleagues, or countries in the news (e.g., China, South Korea, Sweden, Brazil) or with significant economic impact on the United States (e.g., Japan, Canada, Mexico). Locations are easy to add. Stay safe, well, resilient, and kind. Steve Shafer steven.shafer@Stanford.edu
  • 2. 2,586,092 152,804 1 10 100 1,000 10,000 100,000 1,000,000 10,000,000 100,000,000 Actual(points)/Predicted(line) Phase Pre-Model Modeled Deaths Tests USA projection as of 2020-05-27 0 10,000 20,000 30,000 0 2,000 4,000 6,000 Cases/Day Deaths/Day Cases: 1,662,302 (32,123) -- Deaths: 98,220 (829) -- Case Mortality: 5.9% -- Daily Change in Cases: -0.5% Explanation of the Figures 2 Brown dots: cumulative tests Red dots: cumulative cases used to estimate Gompertz function, presently set to last 3 weeks Red line: predicted cumulative cases based on the Gompertz function estimated from the red dots Red number: total cases on June 30th, based on the Gompertz function estimated from the red dots Black number: total Deaths on July 31th, based on log-linear regression of the past 21 days Black line: predicted cumulative deaths, based on a log linear regression of deaths over past 21 days. Axis for deaths / day, usually 1/10th of the axis for cases / day on the left side of the figure. Green line: linear regression over 8 days, used to calculate percent increase / decrease (see below) Daily change in cases, calculated as the slope of the green line (above left) / number of new cases yesterday. Case mortality: cumulative deaths / cumulative cases. Cases / day calculated from cumulative cases used to estimate the Gompertz function Cases / day calculated from cumulative cases not used to estimate the Gompertz function Deaths / day, axis is on the left Blue line: today Blue dots: cumulative cases not used to estimate Gompertz function Cumulative cases (yesterday’s cases) and cumulative deaths (yesterday’s deaths) Axis for cases / day. Axis for deaths / day appears to the right. Geographic location Date of analysis, also shown as blue vertical line below Purple wedge: 98% ensemble prediction interval from COVID-19 Forecast Hub (USA and US States only)
  • 3. Worldwide 33,280,849 1,058,172 1 10 100 1,000 10,000 100,000 1,000,000 10,000,000 100,000,000 Cumulative Phase Pre-Model Modeled Deaths Worldwide projection as of 2020-09-02 0 100,000 200,000 300,000 0 5,000 10,000 15,000 Cases/Day Deaths/Day Cases: 25,748,911 (264,875) -- Deaths: 856,999 (6,480) -- Case Mortality: 3.3% -- Daily Change: +0.3% Cases, -0.5% Deaths 2020-09-02 Summary: 3
  • 4. USA 7,274,416 217,487 1 10 100 1,000 10,000 100,000 1,000,000 10,000,000 100,000,000 Cumulative Phase Pre-Model Modeled Deaths Tests USA projection as of 2020-09-02 Mother'sDay MemorialDay July4th July15,20200 20,000 40,000 60,000 0 1,000 2,000 3,000 Cases/Day Deaths/Day Cases: 6,073,840 (43,253) -- Deaths: 184,664 (1,067) -- Case Mortality: 3.0% -- Daily Change: -0.8% Cases, -1.4% Deaths 2020-09-02 Summary: 4
  • 5. Non-authoritarian Asian ensemble 133,883 2,260 1 10 100 1,000 10,000 100,000 1,000,000 10,000,000 100,000,000 Cumulative Phase Pre-Model Modeled Deaths Tests Japan, South Korea, Thailand, and Vietnam (Population = 328 MM) Non-authoritarian Asian ensemble projection as of 2020-09-02 0 500 1,000 1,500 0 20 40 60 80 Cases/Day Deaths/Day Cases: 93,941 (902) -- Deaths: 1,731 (17) -- Case Mortality: 1.8% -- Daily Change: -3.1% Cases, +2.1% Deaths 2020-09-02 Summary: 5
  • 6. Western Europe 2,213,302 156,962 1 10 100 1,000 10,000 100,000 1,000,000 10,000,000 100,000,000 Cumulative Phase Pre-Model Modeled Deaths Tests Belgium, France, Germany, Greece, Italy, Portugal, Spain, Netherlands, Luxembourg, and the UK (Population = 344MM) Western Europe projection as of 2020-09-02 0 20,000 40,000 60,000 0 1,000 2,000 3,000 Cases/Day Deaths/Day Cases: 1,790,600 (17,586) -- Deaths: 154,627 (113) -- Case Mortality: 8.6% -- Daily Change: +3.2% Cases, -0.6% Deaths 2020-09-02 Summary: 6
  • 9. Average new cases over past 7 days PER ISR ARG BRA ESP COL USA IRQ CHL HND BOL PRY FRA LBY IND GTM ROU ECU MEX UKR DOM ZAF BEL CHE PHL MAR CZE SAU VEN NPL RUS NLD AUT IRN PRT GBR ITA GRC TUR KGZ BGR POL SLV AZE BLR ETH SWE DNK DEU BGD CAN HUN SRB ZMB SVK TUN UZB IDN DZA RWA JOR KAZ NIC KOR SEN USA None 1 in 20,000 1 in 10,000 1 in 6,667 1 in 5,000 1 in 4,000 1 in 3,333 1 6 11 16 21 26 31 36 41 46 51 56 61 66 Rank Averagecases/day Average new cases over past 7 days Excludes countries with population < 5,000,000 2020-09-02 Summary: 9
  • 11. Worldwide deaths PER BEL ESP GBR CHL SWE BRA ITA MEX USA BOL FRA ECU COL NLD IRN ZAF CAN CHE HND IRQ ARG GTM KGZ DOM PRT ROU SAU ISR RUS DEU DNK KAZ SLV SRB AUT BGR TUR BLR EGY AZE FIN HUN UKR IND POL PRY AFG DZA CZE LBY PHL PAK MAR SDN IDN AUS BGD GRC ZMB NIC YEM HTI CMR SEN USA None 1 in 5,000 1 in 2,500 1 in 1,667 1 in 1,250 1 in 1,000 1 6 11 16 21 26 31 36 41 46 51 56 61 66 Rank Totaldeathstodate Worldwide deaths Excludes countries with population < 5,000,000 2020-09-02 Summary: 11
  • 12. Average daily deaths over past 7 days BOL COL PER MEX ARG BRA HND CHL USA ZAF IRQ PRY DOM ECU ROU ISR IRN GTM KAZ BGR SAU SLV MAR UKR ESP LBY IND AUS RUS PHL BLR ZWE TUR IDN NPL GRC POL PRT BGD DZA AZE FRA VEN NLD EGY SRB ETH UZB CAN NIC CHE GBR SYR CZE JPN SEN ITA TUN ZMB MDG HTI AGO YEM AFG KEN USA None 1 in 500,000 1 in 250,000 1 in 166,667 1 in 125,000 1 6 11 16 21 26 31 36 41 46 51 56 61 66 Rank Averagedeaths/day Average daily deaths over past 7 days Excludes countries with population < 5,000,000 2020-09-02 Summary: 12
  • 13. Mortality Trends 0 2 4 6 8 10 12 14 USCaseRateMortality Mortality Type: 13 day rolling median Cumulative Daily Raw Daily vs. Cumulative US Case Rate Mortality Last week excluded because deaths are often backdated 2020-09-02 Summary: 13
  • 14. Change in New Cases per Day New cases are: Increasing > +3% Increasing between +1% and +3% No Change (-1% to +1%) Decreasing between -1% and -3% Decreasing > -3% New cases by state as of 2020-09-02 2020-09-02 Summary: 14
  • 15. Cases as a Percent of Peak Cases HI TX FL OK LA MS AL GA AZ NM KS AR TN NC SC DC CA UT CO NE MO KY WV VA MD DE OR NV WY SD IA IN OH PA NJ CT RI WA ID MT ND MN IL MI NY MA WI VT NH AK ME 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 PercentofPeak Daily Cases as a Percent of Peak Cases 2020-09-02 Summary: 15
  • 16. Change in New Deaths per Day New deaths are: Increasing > +0.5% Increasing between +0.1% and +0.5% No Change (-0.1% to +0.1%) Decreasing between -0.1% and -0.5% Decreasing > -0.5% New deaths by state as of 2020-09-02 2020-09-02 Summary: 16
  • 17. Deaths as a Percent of Peak Deaths HI TX FL OK LA MS AL GA AZ NM KS AR TN NC SC DC CA UT CO NE MO KY WV VA MD DE OR NV WY SD IA IN OH PA NJ CT RI WA ID MT ND MN IL MI NY MA WI VT NH AK ME 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 0 25 50 75 100 PercentofPeak Daily Deaths as a Percent of Peak Deaths 2020-09-02 Summary: 17
  • 18. Change in cases vs change in deaths AL AK AZ AR CA CO CT DEDC FL GA HI ID IL IN IAKS KY LA ME MD MA MI MN MS MO MT NE NV NH NJ NM NY NC ND OH OK OR PA RI SC SD TN TX UT VT VA WA WV WI WY-6 -3 0 3 6 -5.0 -2.5 0.0 2.5 5.0 Change in cases (%/day) Changeindeaths(%/day) Change in cases vs change in deaths over last 14 days as of 2020-09-02 2020-09-02 Summary: 18
  • 19. Total US COVID-19 Cases CA TX FL NY GA IL AZ NJ NC TN LA PA MA AL OH VA SC MI MD IN MO MS WI MN WA NV IA AR OK CO CT UT KY KS NE ID OR NM RI DE DC SD ND WV HI MT NH AK ME WY VT 0 200,000 400,000 600,000 800,000 1 6 11 16 21 26 31 36 41 46 51 Rank Totalcases Masks No Yes Governor aa Democratic Republican Total US COVID-19 Cases p masks as of July 20, 2020: 0.42, p governor: 0.79. NB: association != causation. 2020-09-02 Summary: 19
  • 20. Total US COVID-19 Cases LA FL MS AZ AL GA SC TN NV NY TX NJ IA RI AR DC IL MA CA ID DE MD NE UT NC ND SD OK CT KS VA MO IN MN WI NM MI KY PA OH CO WA AK MT WY OR HI WV NH ME VT None 1 in 100 1 in 50 1 in 33 1 6 11 16 21 26 31 36 41 46 51 Rank TotalCases Masks No Yes Governor aa Democratic Republican Total US COVID-19 Cases p masks as of July 20, 2020: 0.79, p governor: 0.1. NB: association != causation. 2020-09-02 Summary: 20
  • 21. Average US COVID-19 cases over the past 7 days IA SD ND AL MS TN MO GA AR KS OK SC TX HI FL NE ID NC IL KY NV LA IN MN CA WI MT UT VA OH MD WV AK RI MI DE DC AZ WA WY NM OR CO PA MA NJ CT NY ME NH VT None 1 in 10,000 1 in 5,000 1 in 3,333 1 in 2,500 1 6 11 16 21 26 31 36 41 46 51 Rank NewCases/Day Masks No Yes Governor aa Democratic Republican Average US COVID-19 cases over the past 7 days p masks as of July 20, 2020: 0.0066, p governor: 0.0042. NB: association != causation. 2020-09-02 Summary: 21
  • 22. Total US COVID-19 Deaths NY NJ CA TX FL MA IL PA MI GA AZ LA CT OH MD IN SC NC VA MS AL CO WA MN TN MO NV WI IA RI KY AR OK NM DC DE OR KS NH UT NE ID WV SD ND ME MT HI VT AK WY 0 10,000 20,000 30,000 1 6 11 16 21 26 31 36 41 46 51 Rank TotalDeaths Masks No Yes Governor aa Democratic Republican Total US COVID-19 Deaths p masks as of July 20, 2020: 0.062, p governor: 0.23. NB: association != causation. 2020-09-02 Summary: 22
  • 23. Total US COVID-19 Deaths NJ NY MA CT LA RI DC MS AZ MI IL MD DE PA GA SC FL IN AL TX NV NM OH IA CO CA MN NH VA AR NC TN MO WA KY NE ID OK WI ND SD KS UT WV OR MT ME VT WY AK HI None 1 in 2,000 1 in 1,000 1 in 667 1 in 500 1 6 11 16 21 26 31 36 41 46 51 Rank TotalDeaths Masks No Yes Governor aa Democratic Republican Total US COVID-19 Deaths p masks as of July 20, 2020: 0.029, p governor: 0.26. NB: association != causation. 2020-09-02 Summary: 23
  • 24. Average US COVID-19 deaths over the past 7 days MS GA SC LA FL TX AR AZ NV AL ID TN WV IA CA OH OK NC NM MO HI MA VA KY RI IL MT IN MD ND OR MI MN AK PA KS WI WA NE SD UT NY CO DC NH CT DE NJ ME VT WY None 1 in 500,000 1 in 250,000 1 in 166,667 1 in 125,000 1 in 100,000 1 6 11 16 21 26 31 36 41 46 51 Rank Deaths/Day Masks No Yes Governor aa Democratic Republican Average US COVID-19 deaths over the past 7 days p masks as of July 20, 2020: 0.65, p governor: 0.035. NB: association != causation. 2020-09-02 Summary: 24
  • 25. Daily testing trends HI TX FL OK LA MS AL GA AZ NM KS AR TN NC SC DC CA UT CO NE MO KY WV VA MD DE OR NV WY SD IA IN OH PA NJ CT RI WA ID MT ND MN IL MI NY MA WI VT NH AK ME min max min max min max min max min max min max min max min max Dailytestingfrommintomax Daily testing trends from min to max Line = Friedman's supersmoother 2020-09-02 Summary: 25
  • 26. Change in daily tests over past 14 days VT ME AK UT MA HI MI OH CT NC NH IL WV AR IN KS WY NY WA ND MT AL MS RI NJ KY IA OK SD MN DC NE PA MD CA OR MO CO VA ID DE NM GA TX WI AZ LA SC TN FL NV -2.0 0.0 2.0 4.0 6.0 1 6 11 16 21 26 31 36 41 46 51 Rank Changeindailytests(%/day) Masks No Yes Governor aa Democratic Republican Change in daily tests over past 14 days p masks as of July 20, 2020: 0.66, p governor: 0.93. NB: association != causation. 2020-09-02 Summary: 26
  • 27. Percent Tested AK NY DC LA NM CT TN IL NJ CA MI ND RI MA DE WV AR MT OK GA VT MD NC FL WI UT MN ME IA AL NV OH MS WA NE VA KY SC TX SD AZ MO IN NH ID KS HI OR WY PA CO 0 20 40 1 6 11 16 21 26 31 36 41 46 51 Rank PercentTested Masks No Yes Governor aa Democratic Republican Percent Tested p masks as of July 20, 2020: 0.057, p governor: 0.29. NB: association != causation. 2020-09-02 Summary: 27
  • 28. Percent of Positive COVID Tests AZ MS FL AL SC ID TX NV GA KS IA NE SD IN MO AR MD PA CO RI UT LA VA NC DE MA TN MN NJ OK WI CA ND KY IL OH NY WA WY DC OR CT HI MI NH NM MT WV ME AK VT 0.0 5.0 10.0 15.0 1 6 11 16 21 26 31 36 41 46 51 Rank PercentofPositiveTests Masks No Yes Governor aa Democratic Republican Percent of Positive COVID Tests p masks as of July 20, 2020: 0.045, p governor: 0.0058. NB: association != causation. 2020-09-02 Summary: 28
  • 29. Positive fraction trends HI TX FL OK LA MS AL GA AZ NM KS AR TN NC SC DC CA UT CO NE MO KY WV VA MD DE OR NV WY SD IA IN OH PA NJ CT RI WA ID MT ND MN IL MI NY MA WI VT NH AK ME min max min max min max min max min max min max min max min max Fractionpositivefrommintomax Positive fraction trends from min to max 2020-09-02 Summary: 29
  • 30. Change in positive tests over past 14 days HI ND SD IA MO KY OK AL MN WI KS SC NV AK UT MS MT OR NE ID AR TX WV FL IN NC TN VA CA GA WA NM LA PA CO IL AZ DE RI MD MI OH NH NJ DC WY NY VT MA CT ME -1.0 0.0 1.0 2.0 1 6 11 16 21 26 31 36 41 46 51 Rank Changeinpositivetests(%/day) Masks No Yes Governor aa Democratic Republican Change in positive tests over past 14 days p masks as of July 20, 2020: 0.014, p governor: 0.092. NB: association != causation. 2020-09-02 Summary: 30
  • 31. Change in tests vs change in positive tests AL AK AZ AR CA CO CT DE DC FL GA HI ID IL IN IA KS KY LA ME MD MA MI MN MS MO MTNE NV NH NJ NM NY NC ND OH OK OR PA RI SC SD TN TX UT VT VA WA WV WI WY -1 0 1 2 -2 0 2 4 Change in tests (%/day) Changeinpositivetests(%/day) Change in tests vs change in positive tests last 14 days as of 2020-09-02 Size of the state font reflects the number of deaths over the past 7 days. 2020-09-02 Summary: 31
  • 32. Current hospitalizations as a percent of peak since FebruaryHI MO MT ND WV KS AK NE OK WY SD KY ID NC IA AR GA OH VA TN MS AL IN WA CA NV SC MN UT OR WI LA FL TX IL NM RI MD CO AZ DE VT MI PA DC ME MA NJ NH CT NY 0 30 60 90 1 6 11 16 21 26 31 36 41 46 51 Rank Hospitalizations(%ofpeak) Masks No Yes Governor aa Democratic Republican Current hospitalizations as a percent of peak since February p masks as of July 20, 2020: 0.01, p governor: 0.042. NB: association != causation. 2020-09-02 Summary: 32
  • 33. Hospitalizations trends HI TX FL OK LA MS AL GA AZ NM KS AR TN NC SC DC CA UT CO NE MO KY WV VA MD DE OR NV WY SD IA IN OH PA NJ CT RI WA ID MT ND MN IL MI NY MA WI VT NH AK ME min max min max min max min max min max min max min max min max Hospitalizationsfrommintomax Hospitalizations trends from min to max 2020-09-02 Summary: 33
  • 34. Change in hospitalizations over past 14 days DE HI MT SD ND NE IA CT KS WV MO NJ MN OK MI IN RI IL GA WY ID NC DC KY AK PA VA WA OH MA NY TN CO AR MD ME WI AL SC CA UT LA OR MS NV VT FL TX AZ NM NH -5.0 -2.5 0.0 2.5 1 6 11 16 21 26 31 36 41 46 51 Rank Changeinhospitalizations(%/day) Masks No Yes Governor aa Democratic Republican Change in hospitalizations over past 14 days p masks as of July 20, 2020: 0.81, p governor: 0.44. NB: association != causation. 2020-09-02 Summary: 34
  • 35. Change in New Cases per Day Direction Increasing > +2% Increasing between +0.5% and +2% No Change (-0.5% to +0.5%) Decreasing between -0.5% and -2% Decreasing > -2% NA Trends by county as of 2020-09-02 NA = Inadequate data 2020-09-02 Summary: 35