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MAHANTHESHKUMAR.G.T
MSc,Biotchnology
Dept,of biotech.
Sahyadri science college shivamogga.
Welcome you all to the Department of
Biotechnology
2
Biotechnology
During 1970s, biotechnology emerged as a new discipline, as a
result of marriage of biological science with technology.
The term biotechnology was coined in 1917 by a Hungarian
Engineer Karl Ereky.
Biotechnology is not a pure science, but an integrated effort of
these two, the root of which lies in biological science.
DEFINITIONS
Biotechnology is the application of scientific and
engineering principles to the processing of materials by
biological agents to provide goods and service. [The
Organization for Economic Cooperation and
Development (OECD), 1981].
The integrated use of biochemistry, microbiology and
engineering sciences in order to achieve technological
application of the capabilities of microorganisms,
cultured tissue, cells, and parts their
of [The European Federation of Biotechnology
(EFB)]
Biotechnology is an
interdisciplinary subject where we
need the an understanding of
various basic and applied
concepts of biology
Chemistry of Biomolecules and Cellular
Metabolism
Genetics and Molecular Biology
Microbiology
Biochemical Techniques, Biostatistics and
Bioinformatics
•Carl Neuberg (1903)
•Biochemistry is the chemistry of
the living world.
•Biochemistry is the science which
is concerned with the chemical
reactions associated with biological
processes
1. The structure and properties of substances constituting the
frame work of cells and tissues
2. The structure and properties of substances which enter the cell
as useful working materials or sources of energy or leaving the
cell as waste products
3. The metabolism or the chemical changes with in the cell
4. The molecular basis for the performance of various forms of
work by the cell
5. The energy changes occurring in the processes 2 and 3.
• 2/3 of the globe is covered in
water.
•2/3 of all cells contain water.
•Water is the only substance in
world to be found naturally in all 3
states. (Solid: Ice, Liquid: Water,
Gas: Water Vapor.
•Water freezes at 00
C and boils at
1000
C.
A Water molecule consists of two
Hydrogen atoms covalently
bonded to an Oxygen atom.
Because oxygen is more
electronegative than hydrogen, it
has a greater pull on the shared
electrons.
This that the oxygen atom is
slightly negative (δ-) (because of
the closer electrons), and
hydrogen is slightly positive (δ+).
Water is therefore called a Polar
Molecule.
12
slightly positive
charge
slightly negative charge
hydrogen bond between
(+) and (-) areas of
different water molecules
Water molecules form Hydrogen bonds
HYDROGEN BONDS
Hold water molecules
together
Each water molecule
can form a maximum
of 4 hydrogen bonds
The hydrogen bonds
joining water
molecules are weak,
about 1/20th
as strong as
covalent bonds.
They form, break, and
reform with great
frequency
Extraordinary Properties
that are a result of
hydrogen bonds.
Cohesive behavior
Resists changes in
temperature
High heat of vaporization
Expands when it freezes
Versatile solvent
Water Can Ionize to Form H+
and OH-
The ionization of water
The attractive forces between water molecules and the
slight tendency of water to ionize are of crucial
importance to the structure and function of biomolecules.
Water has a number of unique properties that are
essential to life and that determine its environmental
chemical behavior. Many of these properties are due to
water is polar molecular structure and its ability to form
hydrogen bonds.
Water in organisms
Organisms usually contain
60% to 90% water.
Lowest- Plant Seed (20%)
Highest- Jellyfish (99%)
Water helps all organisms
with metabolism, and
specifically helps plants
with photosynthesis and
support.
99%
Water
20%
Water
Water as a solvent
The water molecule is said
to be polar, because
electrons are not equally
shared.
Because the water
molecule is polar, it can
ionize substances easily,
making it a good solvent.
Water is know as ‘The
Universal Solvent’.
Water as a way of transport
Many different substances,
such as blood and sap, are
transported by water.
Sap and blood contain
high amounts of water
making them good
solvents.
Being good solvents allows
them to dissolve the
substances they are
transporting.
Tree Sap
Human
Blood Cells
Water As A Reactant
Water, being a good solvent,
allows many reactions to occur.
Water is used in photosynthesis
to make NADPH2, and
ultimately sugar.
These reactions release oxygen
gas, which is vital to human life.
Without water in
photosynthesis, organisms
would not be able to obtain
energy, and life as we know it
would be impossible.
Water As A Way Of Support
When water enters the cell by
osmosis, the water fills up the cell
so much that the cell prevents
other water intake.
This makes the cell turgid, or stiff.
The cell must be turgid to support
the plant’s leaves.
Also, organisms that live in the
water have weaker skeletons than
organisms that live on land
because of the water’s buoyancy
effect.
Water As A Lubricant
When bones meet at a joint, they
need a fluid between the bones to
prevent scraping against each
other.
That fluid is called a synovial fluid,
which is made mainly of water.
Many internal organs have fluid
around them to keep them
protected. Examples:
Brain: Cerebro-spinal fluid
Lungs: Pleural Fluid
Eyes: Mix of fluids.
Synovial
Fluid
Water In Sexual Reproduction
During fertilization, the male sex
cell, the sperm, must get to the
female sex cell, the ovum in order
to make the zygote, which makes
a new individual.
In organisms adapted for internal
fertilization, the sperm is
transported in semen which
contains mostly water.
In organisms using external
sperm can be transported in the
water habitat.
Sperm Cells
Water As A Habitat
Here are some good reasons why
water is a good habitat:
1. Water can provide a good
protective layer for organisms in it.
2. Water provides buoyancy and
support for organisms in the
water.
3. Dissolved oxygen can be plentiful
in water, for use in respiration.
4. Fertilization is easier in water.
5. Water helps maintain a constant
temperature.
6.Water keeps out UV rays from the
sun.
THE PROPERTIES OF WATER
- Excellent solvent
- Highest dielectric constant of any common liquid.
- Higher surface tension than any other liquid.
- Transparent to visible and longer-wavelength fraction of
ultraviolet light.
- Maximum density as liquid at 4 o
C.
- Higher heat of evaporation than any other material.
- Higher latent heat of fusion than any other liquid except
ammonia
- Higher heat capacity than any other liquid except
ammonia
“Universal” Solvent
A liquid that is a completely homogeneous mixture of two
or more substances is called a solution.
A sugar cube in a glass of water will eventually dissolve
to form a uniform mixture of sugar and water.
The dissolving agent is the solvent and the substance that
is dissolved is the solute.
In our example, water is the solvent and sugar the
solute.
In an aqueous solution, water is the solvent.
Water is an effective
solvent as it can form
hydrogen bonds.
Water clings to polar
molecules causing them
to be soluble in water.
 Hydrophilic -
attracted to water
 Hydrophobic -
repelled by water
 Water causes
hydrophobic
molecules to
aggregate or assume
specific shapes.
The Solvent Properties of Water Derive
from Its Polar Nature
Water has a high dielectric
constant.
Dielectric constant is a
measure of the ability of a
solvent to solvate ions.
Water forms H-bonds with
polar solutes.
Hydrophobic interactions -
a "secret of life“.
cohesion = water attracted to other water
molecules because of polar properties
adhesion = water attracted to other materials
surface tension = water is pulled together
creating the smallest surface area possible
Cohesion, Adhesion and Surface Tension
Surface tension, a measure of the force necessary to
stretch or break the surface of a liquid, is related to
cohesion.
Water has a greater surface tension than most other liquids
because hydrogen bonds among surface water molecules
resist stretching or breaking the surface.
Water behaves as if
covered by an invisible
film.
Some animals can stand,
walk, or run on water
without breaking the
surface.
Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings
Fig. 3.3
Adhesion refers to
attraction to other
substances.
Water is adhesive to
any substance with
which it can form
hydrogen bonds.
Adhesion
Capillary action
water evaporates from leaves =
transpiration
adhesion,
cohesion and
capillary action
water taken up by roots
Because water has
both adhesive and
cohesive properties,
capillary action is
present.
In order to raise the temperature of water, the average
molecular speed has to increase.
It takes much more energy to raise the temperature of water
compared to other solvents because hydrogen bonds hold
the water molecules together!
Water has a high heat capacity.
“The specific heat is the amount of heat per unit mass
required to raise the temperature by one degree
Celsius.”
High Heat Capacity/High specific heat
High Heat of Vaporization
High heat of vaporization
Amount of energy required to change 1g of liquid water
into a gas (586 calories). large number of hydrogen
bonds broken when heat energy is applied
Water For Constant Temperature
 Water has a very high specific heat.
(4200J/kg0C)
 That means much energy is
required to change the temperature
of water by a single degree.
 That provides a perfect habitat for
marine mammals, because of the
non-changing temperature.
 Another way water helps mammals
maintain their body temperature is
by sweating.
 Mammals sweat when their body
temperature is too high.
 Sweat is made of mostly water.
 When the water evaporates from
the organism it creates a cooling
effect, therefore lowering the
organisms body temperature.
As a liquid evaporates, the surface of the
liquid that remains behind cools -
Evaporative cooling.
Evaporative cooling moderates
temperature in lakes and ponds and
prevents terrestrial organisms from
overheating.
Evaporation of water from the leaves of
plants or the skin of animals removes
excess heat.
Density
Water is less dense as a solid!
This is because the hydrogen bonds are stable in ice –
each molecule of water is bound to four of its
neighbors.
Solid – water molecules
are bonded together –
space between fixed
Liquid – water molecules
are constantly bonding
and rebonding – space is
always changing
same mass but
a larger volume Density = mass/volume
When water reaches 0o
C, water becomes locked into a
crystalline lattice with each molecule bonded to the
maximum of four partners.
As ice starts to melt, some of the hydrogen bonds break
and some water molecules can slip closer together than
they can while in the ice state.
Ice is about 10% less dense than water at 4o
C.
Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings
Fig. 3.5
Density of Water
Most dense at 4o
C
Contracts until 4o
C
Expands from 4o
C
to 0o
C
The density of water:
1. Prevents water from freezing from the bottom up.
2. Ice forms on the surface first—the freezing of the
water releases heat to the water below creating
insulation. (organisms can still live in the water
underneath the ice during winter)
3. Makes transition between season less abrupt.
Water is Transparent
The fact that water is clear allows light to pass
through it
Aquatic plants can receive sunlight
Light can pass through the eyeball to receptor cells
in the back
Properties of Water
So, can you name all of the properties of water?
Adhesion
Cohesion
Capillary action
High surface tension
Holds heat to regulate temperature (High heat capacity)
Less dense as a solid than a liquid
WATER

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WATER

  • 2. Welcome you all to the Department of Biotechnology 2
  • 3. Biotechnology During 1970s, biotechnology emerged as a new discipline, as a result of marriage of biological science with technology. The term biotechnology was coined in 1917 by a Hungarian Engineer Karl Ereky. Biotechnology is not a pure science, but an integrated effort of these two, the root of which lies in biological science.
  • 4. DEFINITIONS Biotechnology is the application of scientific and engineering principles to the processing of materials by biological agents to provide goods and service. [The Organization for Economic Cooperation and Development (OECD), 1981]. The integrated use of biochemistry, microbiology and engineering sciences in order to achieve technological application of the capabilities of microorganisms, cultured tissue, cells, and parts their of [The European Federation of Biotechnology (EFB)]
  • 5.
  • 6. Biotechnology is an interdisciplinary subject where we need the an understanding of various basic and applied concepts of biology
  • 7. Chemistry of Biomolecules and Cellular Metabolism Genetics and Molecular Biology Microbiology Biochemical Techniques, Biostatistics and Bioinformatics
  • 8. •Carl Neuberg (1903) •Biochemistry is the chemistry of the living world. •Biochemistry is the science which is concerned with the chemical reactions associated with biological processes
  • 9. 1. The structure and properties of substances constituting the frame work of cells and tissues 2. The structure and properties of substances which enter the cell as useful working materials or sources of energy or leaving the cell as waste products 3. The metabolism or the chemical changes with in the cell 4. The molecular basis for the performance of various forms of work by the cell 5. The energy changes occurring in the processes 2 and 3.
  • 10. • 2/3 of the globe is covered in water. •2/3 of all cells contain water. •Water is the only substance in world to be found naturally in all 3 states. (Solid: Ice, Liquid: Water, Gas: Water Vapor. •Water freezes at 00 C and boils at 1000 C.
  • 11. A Water molecule consists of two Hydrogen atoms covalently bonded to an Oxygen atom. Because oxygen is more electronegative than hydrogen, it has a greater pull on the shared electrons. This that the oxygen atom is slightly negative (δ-) (because of the closer electrons), and hydrogen is slightly positive (δ+). Water is therefore called a Polar Molecule.
  • 12. 12 slightly positive charge slightly negative charge hydrogen bond between (+) and (-) areas of different water molecules Water molecules form Hydrogen bonds
  • 13. HYDROGEN BONDS Hold water molecules together Each water molecule can form a maximum of 4 hydrogen bonds The hydrogen bonds joining water molecules are weak, about 1/20th as strong as covalent bonds. They form, break, and reform with great frequency Extraordinary Properties that are a result of hydrogen bonds. Cohesive behavior Resists changes in temperature High heat of vaporization Expands when it freezes Versatile solvent
  • 14. Water Can Ionize to Form H+ and OH- The ionization of water
  • 15. The attractive forces between water molecules and the slight tendency of water to ionize are of crucial importance to the structure and function of biomolecules. Water has a number of unique properties that are essential to life and that determine its environmental chemical behavior. Many of these properties are due to water is polar molecular structure and its ability to form hydrogen bonds.
  • 16. Water in organisms Organisms usually contain 60% to 90% water. Lowest- Plant Seed (20%) Highest- Jellyfish (99%) Water helps all organisms with metabolism, and specifically helps plants with photosynthesis and support. 99% Water 20% Water
  • 17. Water as a solvent The water molecule is said to be polar, because electrons are not equally shared. Because the water molecule is polar, it can ionize substances easily, making it a good solvent. Water is know as ‘The Universal Solvent’.
  • 18. Water as a way of transport Many different substances, such as blood and sap, are transported by water. Sap and blood contain high amounts of water making them good solvents. Being good solvents allows them to dissolve the substances they are transporting. Tree Sap Human Blood Cells
  • 19. Water As A Reactant Water, being a good solvent, allows many reactions to occur. Water is used in photosynthesis to make NADPH2, and ultimately sugar. These reactions release oxygen gas, which is vital to human life. Without water in photosynthesis, organisms would not be able to obtain energy, and life as we know it would be impossible.
  • 20. Water As A Way Of Support When water enters the cell by osmosis, the water fills up the cell so much that the cell prevents other water intake. This makes the cell turgid, or stiff. The cell must be turgid to support the plant’s leaves. Also, organisms that live in the water have weaker skeletons than organisms that live on land because of the water’s buoyancy effect.
  • 21. Water As A Lubricant When bones meet at a joint, they need a fluid between the bones to prevent scraping against each other. That fluid is called a synovial fluid, which is made mainly of water. Many internal organs have fluid around them to keep them protected. Examples: Brain: Cerebro-spinal fluid Lungs: Pleural Fluid Eyes: Mix of fluids. Synovial Fluid
  • 22. Water In Sexual Reproduction During fertilization, the male sex cell, the sperm, must get to the female sex cell, the ovum in order to make the zygote, which makes a new individual. In organisms adapted for internal fertilization, the sperm is transported in semen which contains mostly water. In organisms using external sperm can be transported in the water habitat. Sperm Cells
  • 23. Water As A Habitat Here are some good reasons why water is a good habitat: 1. Water can provide a good protective layer for organisms in it. 2. Water provides buoyancy and support for organisms in the water. 3. Dissolved oxygen can be plentiful in water, for use in respiration. 4. Fertilization is easier in water. 5. Water helps maintain a constant temperature. 6.Water keeps out UV rays from the sun.
  • 24. THE PROPERTIES OF WATER - Excellent solvent - Highest dielectric constant of any common liquid. - Higher surface tension than any other liquid. - Transparent to visible and longer-wavelength fraction of ultraviolet light. - Maximum density as liquid at 4 o C. - Higher heat of evaporation than any other material. - Higher latent heat of fusion than any other liquid except ammonia - Higher heat capacity than any other liquid except ammonia
  • 25. “Universal” Solvent A liquid that is a completely homogeneous mixture of two or more substances is called a solution. A sugar cube in a glass of water will eventually dissolve to form a uniform mixture of sugar and water. The dissolving agent is the solvent and the substance that is dissolved is the solute. In our example, water is the solvent and sugar the solute. In an aqueous solution, water is the solvent.
  • 26. Water is an effective solvent as it can form hydrogen bonds. Water clings to polar molecules causing them to be soluble in water.  Hydrophilic - attracted to water  Hydrophobic - repelled by water  Water causes hydrophobic molecules to aggregate or assume specific shapes.
  • 27. The Solvent Properties of Water Derive from Its Polar Nature Water has a high dielectric constant. Dielectric constant is a measure of the ability of a solvent to solvate ions. Water forms H-bonds with polar solutes. Hydrophobic interactions - a "secret of life“.
  • 28. cohesion = water attracted to other water molecules because of polar properties adhesion = water attracted to other materials surface tension = water is pulled together creating the smallest surface area possible Cohesion, Adhesion and Surface Tension
  • 29. Surface tension, a measure of the force necessary to stretch or break the surface of a liquid, is related to cohesion. Water has a greater surface tension than most other liquids because hydrogen bonds among surface water molecules resist stretching or breaking the surface. Water behaves as if covered by an invisible film. Some animals can stand, walk, or run on water without breaking the surface. Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings Fig. 3.3
  • 30. Adhesion refers to attraction to other substances. Water is adhesive to any substance with which it can form hydrogen bonds. Adhesion
  • 31. Capillary action water evaporates from leaves = transpiration adhesion, cohesion and capillary action water taken up by roots Because water has both adhesive and cohesive properties, capillary action is present.
  • 32. In order to raise the temperature of water, the average molecular speed has to increase. It takes much more energy to raise the temperature of water compared to other solvents because hydrogen bonds hold the water molecules together! Water has a high heat capacity. “The specific heat is the amount of heat per unit mass required to raise the temperature by one degree Celsius.” High Heat Capacity/High specific heat
  • 33. High Heat of Vaporization High heat of vaporization Amount of energy required to change 1g of liquid water into a gas (586 calories). large number of hydrogen bonds broken when heat energy is applied
  • 34. Water For Constant Temperature  Water has a very high specific heat. (4200J/kg0C)  That means much energy is required to change the temperature of water by a single degree.  That provides a perfect habitat for marine mammals, because of the non-changing temperature.  Another way water helps mammals maintain their body temperature is by sweating.  Mammals sweat when their body temperature is too high.  Sweat is made of mostly water.  When the water evaporates from the organism it creates a cooling effect, therefore lowering the organisms body temperature.
  • 35. As a liquid evaporates, the surface of the liquid that remains behind cools - Evaporative cooling. Evaporative cooling moderates temperature in lakes and ponds and prevents terrestrial organisms from overheating. Evaporation of water from the leaves of plants or the skin of animals removes excess heat.
  • 36. Density Water is less dense as a solid! This is because the hydrogen bonds are stable in ice – each molecule of water is bound to four of its neighbors. Solid – water molecules are bonded together – space between fixed Liquid – water molecules are constantly bonding and rebonding – space is always changing same mass but a larger volume Density = mass/volume
  • 37. When water reaches 0o C, water becomes locked into a crystalline lattice with each molecule bonded to the maximum of four partners. As ice starts to melt, some of the hydrogen bonds break and some water molecules can slip closer together than they can while in the ice state. Ice is about 10% less dense than water at 4o C. Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings Fig. 3.5
  • 38. Density of Water Most dense at 4o C Contracts until 4o C Expands from 4o C to 0o C The density of water: 1. Prevents water from freezing from the bottom up. 2. Ice forms on the surface first—the freezing of the water releases heat to the water below creating insulation. (organisms can still live in the water underneath the ice during winter) 3. Makes transition between season less abrupt.
  • 39. Water is Transparent The fact that water is clear allows light to pass through it Aquatic plants can receive sunlight Light can pass through the eyeball to receptor cells in the back
  • 40. Properties of Water So, can you name all of the properties of water? Adhesion Cohesion Capillary action High surface tension Holds heat to regulate temperature (High heat capacity) Less dense as a solid than a liquid