SlideShare a Scribd company logo
Understanding Microtubule Dependent Signaling
in the generation of Cellular Asymmetries
Camilla Ascanelli | Josana Rodriguez Sanchez’s lab | ICaMB | Newcastle University
Aim of the investigation
Polarity is displayed by most complex beings in the form of
structural asymmetries within physiological systems and cells. The
earliest polarity is seen in C. Elegans is in the single-cell embryo.
Our work is aimed at investigating how polarity is established
and maintained in this stage of development.
Introduction
In C. Elegans, polarity is established through two
pathways:
Actomyosin Meshwork (AMM) & aPARs (aPKC3,
PAR3, PAR6):
Prior to symmetry breaking, anterior PAR proteins
(aPARs) are distributed uniformly at the cortex [a].
Sperm entry signals retract from the cortex nearest
the centrosome, allowing pPAR accumulation [c]. [1]
aPARs retraction occurs through “cortical flows”, a
network of interconnected actomyosin foci and
cables under the plasma membrane which begins
after completion of the meiotic divisions [b-f]. [2]
This network disperses at the point of contact as the
paternally derived centrosome reaches the cortex. [3]
Vanishing of aPARs from the cortex nearest the
centrosome suggests that cortical flows carry the
aPARs. This displacement by the cortical flows
allows pPARs loading [d]. [2] pPARs can also access
the posterior cortex in the absence of cortical flows,
as seen with the NOP-1 mutant, allowing the
domains to be established, more slowly. [4;5;6]
Sperm centrosome-enucleated microtubules (MT) &
pPARs (PAR-2, PAR-1, LGL-1):
Loading and positioning of PAR-2 is associated with
microtubule nucleation by the sperm centrosome [d]
[7;8;9]. PAR-2 loads first and recruits PAR-1[e], which,
in turn, can phosphorylate PAR-3 (aPAR), triggering
exclusion of aPARS from the posterior domain.[10;11]
Before symmetry breaking, PAR-2 is maintained in
the cytosol through phosphorylation by aPKC-3. It is
thought that microtubules compete with aPKC-3 for
access to PAR-2. [g] [3]
Research outline
Knockdown
genes
thought to be
involved in
MT pathway
through RNAi
Step 1
Perform
embryonic
lethality
screens for
said genes
Step 2
Re-test genes
with non
significant-
results by
changes in
RNAi exposure
and larval stage
Step 3
Perform
confocal IF to
characterize
phenotype of
knockdown
and quantify
polarity loss
Step 4
•  In order to determine whether a gene is responsible for loss of polarity
through the Microtubule (MT) pathway, the NOP-1 mutant, which
presents a loss of the actomyosin meshwork pathway, was used. The
gene of interest would then have been knocked out through RNAi in
order to assess its involvement in the surviving pathway. If this were
the case, the gene knockdown would result in polarity loss.
Results
•  The table shows the results of the embryonic lethality screens. Each gene
was tested in triplicate. The green squares indicate significant positive hits –
i.e. the eggs exposed to the RNAi hatched less in the NOP-1 mutant than in
the N2 wild type.
Conclusion
•  The screens resulted in 8 candidate genes (gbp-1, Y65B4BR.5, let-754,
klp-19, arf-1.2, rack-1, ego-2, cnt-2) for a qualitative investigation of the
phenotype resulting from their knockdown.
•  klp-19 and gbp-1 were analysed through confocal immunofluorescence. Only
one embryo out of the 10 analysed for klp-19 showed polarity loss, and none
for gbp-1(RNAi), contrasting with the significant results obtained from the
embryonic lethality enhancement screen.
Works Cited
1.  Motegi F, Seydoux G. The PAR network: redundancy and robustness in a symmetry-breaking system. Philosophical
Transactions of the Royal Society B: Biological Sciences. 2013;368(1629):20130010-20130010.
2.  Munro E, Nance J, Priess J. Cortical Flows Powered by Asymmetrical Contraction Transport PAR Proteins to
Establish and Maintain Anterior-Posterior Polarity in the Early C. elegans Embryo. Developmental Cell. 2004;7(3):
413-424.
3.  Motegi F, Sugimoto A. Sequential functioning of the ECT-2 RhoGEF, RHO-1 and CDC-42 establishes cell polarity in
Caenorhabditis elegans embryos. Nature Cell Biology. 2006;8(9):978-985.
4.  Motegi F, Zonies S, Hao Y, Cuenca A, Griffin E, Seydoux G. Microtubules induce self-organization of polarized PAR
domains in Caenorhabditis elegans zygotes. Nature Cell Biology. 2011;13(11):1361-1367.
5.  Shelton C, Carter J, Ellis G, Bowerman B. The Nonmuscle Myosin Regulatory Light Chain Gene mlc-4 Is Required
for Cytokinesis, Anterior-Posterior Polarity, and Body Morphology during Caenorhabditis elegans Embryogenesis.
The Journal of Cell Biology. 1999;146(2):439-451.
6.  Zonies S, Motegi F, Hao Y, Seydoux G. Symmetry breaking and polarization of the C. elegans zygote by the polarity
protein PAR-2. Development. 2010;137(10):1669-1677.
7.  Tsai M, Ahringer J. Microtubules are involved in anterior-posterior axis formation in C. elegans embryos. The Journal
of Cell Biology. 2007;179(3):397-402.
8.  Wallenfang MR, Seydoux G. Polarization of the anterior – posterior axis of C. elegans is a microtubule-directed
process. Nature 2000;408(6808):89-92.
9.  O'Connell K, Maxwell K, White J. The spd-2 gene is required for polarization of the anteroposterior axis and
formation of the sperm asters in the Caenorhabditis elegans zygote. Developmental Biology. 2000;222(1):55-70.
10.  Boyd L, Guo S, Levitan D, Stinchcomb DT, Kemphues KJ. 1996 PAR-2 is asymmetrically distributed and promotes
association of P granules and PAR-1 with the cortex in C. elegans embryos. Development 1996;122(10):3075 –
3084.
Our Model
Acknowledgments
Midplain section of embryos
stained for PAR-3 (red) PAR-2
(green) and DAPI (blue). From
left to right: N2 (wt) without any
gene RNAi (F0), N2 with klp-19
and NOP-1 without RNAi (F0)
shows established polarity;
NOP-1 with klp-19 RNAi
shows loss of polarity
domains.
Cortical view of the same
embryos as those above taken
to show more clearly the loss of
polarity domains in the NOP-1
klp-19 embryo.
I’d like to thank my supervisor Josana Rodriguez and
the master student Jack Martin for helping me through
the project.

More Related Content

What's hot

Drosophila melanogaster (genome analysis)
Drosophila melanogaster (genome analysis)Drosophila melanogaster (genome analysis)
Drosophila melanogaster (genome analysis)ahmet varis
 
Epigenetic modifications of proteins
Epigenetic modifications of proteinsEpigenetic modifications of proteins
Epigenetic modifications of proteinsAkshay More
 
Minimal and Compact
Minimal and CompactMinimal and Compact
Minimal and CompactJoshua Gefen
 
3 genetics syllabus statements
3 genetics syllabus statements3 genetics syllabus statements
3 genetics syllabus statementscartlidge
 
Comparative and functional genomics
Comparative and functional genomicsComparative and functional genomics
Comparative and functional genomicsJalormi Parekh
 
Terminology related to genetics
Terminology related to geneticsTerminology related to genetics
Terminology related to geneticsenamifat
 
cell surface actin remodeling
cell surface actin remodelingcell surface actin remodeling
cell surface actin remodelingSoM
 
Important genetics terminology
Important genetics terminologyImportant genetics terminology
Important genetics terminologyKamal Bhatti
 
Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...
Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...
Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...Ben Laufer
 
Micro RNAs and ageing Dr Felekkis 2014 (1)
Micro RNAs and ageing Dr Felekkis 2014 (1)Micro RNAs and ageing Dr Felekkis 2014 (1)
Micro RNAs and ageing Dr Felekkis 2014 (1)Marios Kyriazis
 

What's hot (19)

Epigenetics
EpigeneticsEpigenetics
Epigenetics
 
Drosophila melanogaster (genome analysis)
Drosophila melanogaster (genome analysis)Drosophila melanogaster (genome analysis)
Drosophila melanogaster (genome analysis)
 
Epigenetic modifications of proteins
Epigenetic modifications of proteinsEpigenetic modifications of proteins
Epigenetic modifications of proteins
 
Da 2
Da 2Da 2
Da 2
 
Molecular evolution
Molecular evolutionMolecular evolution
Molecular evolution
 
Epigenetics
EpigeneticsEpigenetics
Epigenetics
 
Minimal and Compact
Minimal and CompactMinimal and Compact
Minimal and Compact
 
3 genetics syllabus statements
3 genetics syllabus statements3 genetics syllabus statements
3 genetics syllabus statements
 
Comparative and functional genomics
Comparative and functional genomicsComparative and functional genomics
Comparative and functional genomics
 
Epigenetics
EpigeneticsEpigenetics
Epigenetics
 
Terminology related to genetics
Terminology related to geneticsTerminology related to genetics
Terminology related to genetics
 
dna Imprinting
 dna Imprinting dna Imprinting
dna Imprinting
 
cell surface actin remodeling
cell surface actin remodelingcell surface actin remodeling
cell surface actin remodeling
 
Important genetics terminology
Important genetics terminologyImportant genetics terminology
Important genetics terminology
 
Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...
Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...
Long-lasting alterations to DNA methylation and ncRNAs could underlie the eff...
 
Micro RNAs and ageing Dr Felekkis 2014 (1)
Micro RNAs and ageing Dr Felekkis 2014 (1)Micro RNAs and ageing Dr Felekkis 2014 (1)
Micro RNAs and ageing Dr Felekkis 2014 (1)
 
Dna and mutation
Dna and mutationDna and mutation
Dna and mutation
 
Types of genomics ppt
Types of genomics pptTypes of genomics ppt
Types of genomics ppt
 
Epigenomics gyanika
Epigenomics   gyanikaEpigenomics   gyanika
Epigenomics gyanika
 

Similar to Summer project poster

The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...
The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...
The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...Wyatt Nelson
 
Wong J et al. - PLoS ONE - 2013
Wong J et al. - PLoS ONE - 2013Wong J et al. - PLoS ONE - 2013
Wong J et al. - PLoS ONE - 2013Jacob Wong
 
Fabrizio 2003 dev biol
Fabrizio 2003 dev biolFabrizio 2003 dev biol
Fabrizio 2003 dev biolJames Fabrizio
 
Induced pluripotent stem cells
Induced pluripotent stem cells Induced pluripotent stem cells
Induced pluripotent stem cells punnu_malik
 
Metalloprotease's Written Proposal
Metalloprotease's Written ProposalMetalloprotease's Written Proposal
Metalloprotease's Written ProposalAna Laura Velázquez
 
education_11-24
education_11-24education_11-24
education_11-24pharmdude
 
Characterization of stem cells
Characterization of stem cellsCharacterization of stem cells
Characterization of stem cellsRumana Tamboli
 
Stem Cell Report 2013
Stem Cell Report 2013Stem Cell Report 2013
Stem Cell Report 2013Lukasz Jasnos
 
Modulation of pluripotency in the porcine embryo and i ps cells (Dec.27,2012)
Modulation of pluripotency in the  porcine embryo and i ps cells (Dec.27,2012) Modulation of pluripotency in the  porcine embryo and i ps cells (Dec.27,2012)
Modulation of pluripotency in the porcine embryo and i ps cells (Dec.27,2012) Ahmad Usama
 
homeostasis and soma-germline interaction
homeostasis and soma-germline interactionhomeostasis and soma-germline interaction
homeostasis and soma-germline interactionBhavya Vashisht
 
Astrocytes Play a Key Role in Drosophila Mushroom Body Axon Pruning
Astrocytes Play a Key Role in Drosophila Mushroom Body Axon PruningAstrocytes Play a Key Role in Drosophila Mushroom Body Axon Pruning
Astrocytes Play a Key Role in Drosophila Mushroom Body Axon PruningNethravathi Siri
 
cytoskeleton.pptx
cytoskeleton.pptxcytoskeleton.pptx
cytoskeleton.pptxJordyLiong1
 
Drosophila Melanogaster Genome And its developmental process
Drosophila Melanogaster  Genome And its developmental processDrosophila Melanogaster  Genome And its developmental process
Drosophila Melanogaster Genome And its developmental processSubhradeep sarkar
 

Similar to Summer project poster (20)

The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...
The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...
The Impact of Lysogenic and Tail Assembly Chaperone Proteins on the Life Cycl...
 
Wong J et al. - PLoS ONE - 2013
Wong J et al. - PLoS ONE - 2013Wong J et al. - PLoS ONE - 2013
Wong J et al. - PLoS ONE - 2013
 
fabrizio1998
fabrizio1998fabrizio1998
fabrizio1998
 
GenesDev_2008
GenesDev_2008GenesDev_2008
GenesDev_2008
 
Fabrizio 2003 dev biol
Fabrizio 2003 dev biolFabrizio 2003 dev biol
Fabrizio 2003 dev biol
 
Induced pluripotent stem cells
Induced pluripotent stem cells Induced pluripotent stem cells
Induced pluripotent stem cells
 
Metalloprotease's Written Proposal
Metalloprotease's Written ProposalMetalloprotease's Written Proposal
Metalloprotease's Written Proposal
 
Metalloprotease's Written Proposal
Metalloprotease's Written ProposalMetalloprotease's Written Proposal
Metalloprotease's Written Proposal
 
education_11-24
education_11-24education_11-24
education_11-24
 
Characterization of stem cells
Characterization of stem cellsCharacterization of stem cells
Characterization of stem cells
 
Knockout mice
Knockout miceKnockout mice
Knockout mice
 
Pielak_DevBiol2004
Pielak_DevBiol2004Pielak_DevBiol2004
Pielak_DevBiol2004
 
Stem Cell Report 2013
Stem Cell Report 2013Stem Cell Report 2013
Stem Cell Report 2013
 
Modulation of pluripotency in the porcine embryo and i ps cells (Dec.27,2012)
Modulation of pluripotency in the  porcine embryo and i ps cells (Dec.27,2012) Modulation of pluripotency in the  porcine embryo and i ps cells (Dec.27,2012)
Modulation of pluripotency in the porcine embryo and i ps cells (Dec.27,2012)
 
homeostasis and soma-germline interaction
homeostasis and soma-germline interactionhomeostasis and soma-germline interaction
homeostasis and soma-germline interaction
 
Fall project
Fall projectFall project
Fall project
 
Fogarty Report
Fogarty ReportFogarty Report
Fogarty Report
 
Astrocytes Play a Key Role in Drosophila Mushroom Body Axon Pruning
Astrocytes Play a Key Role in Drosophila Mushroom Body Axon PruningAstrocytes Play a Key Role in Drosophila Mushroom Body Axon Pruning
Astrocytes Play a Key Role in Drosophila Mushroom Body Axon Pruning
 
cytoskeleton.pptx
cytoskeleton.pptxcytoskeleton.pptx
cytoskeleton.pptx
 
Drosophila Melanogaster Genome And its developmental process
Drosophila Melanogaster  Genome And its developmental processDrosophila Melanogaster  Genome And its developmental process
Drosophila Melanogaster Genome And its developmental process
 

Summer project poster

  • 1. Understanding Microtubule Dependent Signaling in the generation of Cellular Asymmetries Camilla Ascanelli | Josana Rodriguez Sanchez’s lab | ICaMB | Newcastle University Aim of the investigation Polarity is displayed by most complex beings in the form of structural asymmetries within physiological systems and cells. The earliest polarity is seen in C. Elegans is in the single-cell embryo. Our work is aimed at investigating how polarity is established and maintained in this stage of development. Introduction In C. Elegans, polarity is established through two pathways: Actomyosin Meshwork (AMM) & aPARs (aPKC3, PAR3, PAR6): Prior to symmetry breaking, anterior PAR proteins (aPARs) are distributed uniformly at the cortex [a]. Sperm entry signals retract from the cortex nearest the centrosome, allowing pPAR accumulation [c]. [1] aPARs retraction occurs through “cortical flows”, a network of interconnected actomyosin foci and cables under the plasma membrane which begins after completion of the meiotic divisions [b-f]. [2] This network disperses at the point of contact as the paternally derived centrosome reaches the cortex. [3] Vanishing of aPARs from the cortex nearest the centrosome suggests that cortical flows carry the aPARs. This displacement by the cortical flows allows pPARs loading [d]. [2] pPARs can also access the posterior cortex in the absence of cortical flows, as seen with the NOP-1 mutant, allowing the domains to be established, more slowly. [4;5;6] Sperm centrosome-enucleated microtubules (MT) & pPARs (PAR-2, PAR-1, LGL-1): Loading and positioning of PAR-2 is associated with microtubule nucleation by the sperm centrosome [d] [7;8;9]. PAR-2 loads first and recruits PAR-1[e], which, in turn, can phosphorylate PAR-3 (aPAR), triggering exclusion of aPARS from the posterior domain.[10;11] Before symmetry breaking, PAR-2 is maintained in the cytosol through phosphorylation by aPKC-3. It is thought that microtubules compete with aPKC-3 for access to PAR-2. [g] [3] Research outline Knockdown genes thought to be involved in MT pathway through RNAi Step 1 Perform embryonic lethality screens for said genes Step 2 Re-test genes with non significant- results by changes in RNAi exposure and larval stage Step 3 Perform confocal IF to characterize phenotype of knockdown and quantify polarity loss Step 4 •  In order to determine whether a gene is responsible for loss of polarity through the Microtubule (MT) pathway, the NOP-1 mutant, which presents a loss of the actomyosin meshwork pathway, was used. The gene of interest would then have been knocked out through RNAi in order to assess its involvement in the surviving pathway. If this were the case, the gene knockdown would result in polarity loss. Results •  The table shows the results of the embryonic lethality screens. Each gene was tested in triplicate. The green squares indicate significant positive hits – i.e. the eggs exposed to the RNAi hatched less in the NOP-1 mutant than in the N2 wild type. Conclusion •  The screens resulted in 8 candidate genes (gbp-1, Y65B4BR.5, let-754, klp-19, arf-1.2, rack-1, ego-2, cnt-2) for a qualitative investigation of the phenotype resulting from their knockdown. •  klp-19 and gbp-1 were analysed through confocal immunofluorescence. Only one embryo out of the 10 analysed for klp-19 showed polarity loss, and none for gbp-1(RNAi), contrasting with the significant results obtained from the embryonic lethality enhancement screen. Works Cited 1.  Motegi F, Seydoux G. The PAR network: redundancy and robustness in a symmetry-breaking system. Philosophical Transactions of the Royal Society B: Biological Sciences. 2013;368(1629):20130010-20130010. 2.  Munro E, Nance J, Priess J. Cortical Flows Powered by Asymmetrical Contraction Transport PAR Proteins to Establish and Maintain Anterior-Posterior Polarity in the Early C. elegans Embryo. Developmental Cell. 2004;7(3): 413-424. 3.  Motegi F, Sugimoto A. Sequential functioning of the ECT-2 RhoGEF, RHO-1 and CDC-42 establishes cell polarity in Caenorhabditis elegans embryos. Nature Cell Biology. 2006;8(9):978-985. 4.  Motegi F, Zonies S, Hao Y, Cuenca A, Griffin E, Seydoux G. Microtubules induce self-organization of polarized PAR domains in Caenorhabditis elegans zygotes. Nature Cell Biology. 2011;13(11):1361-1367. 5.  Shelton C, Carter J, Ellis G, Bowerman B. The Nonmuscle Myosin Regulatory Light Chain Gene mlc-4 Is Required for Cytokinesis, Anterior-Posterior Polarity, and Body Morphology during Caenorhabditis elegans Embryogenesis. The Journal of Cell Biology. 1999;146(2):439-451. 6.  Zonies S, Motegi F, Hao Y, Seydoux G. Symmetry breaking and polarization of the C. elegans zygote by the polarity protein PAR-2. Development. 2010;137(10):1669-1677. 7.  Tsai M, Ahringer J. Microtubules are involved in anterior-posterior axis formation in C. elegans embryos. The Journal of Cell Biology. 2007;179(3):397-402. 8.  Wallenfang MR, Seydoux G. Polarization of the anterior – posterior axis of C. elegans is a microtubule-directed process. Nature 2000;408(6808):89-92. 9.  O'Connell K, Maxwell K, White J. The spd-2 gene is required for polarization of the anteroposterior axis and formation of the sperm asters in the Caenorhabditis elegans zygote. Developmental Biology. 2000;222(1):55-70. 10.  Boyd L, Guo S, Levitan D, Stinchcomb DT, Kemphues KJ. 1996 PAR-2 is asymmetrically distributed and promotes association of P granules and PAR-1 with the cortex in C. elegans embryos. Development 1996;122(10):3075 – 3084. Our Model Acknowledgments Midplain section of embryos stained for PAR-3 (red) PAR-2 (green) and DAPI (blue). From left to right: N2 (wt) without any gene RNAi (F0), N2 with klp-19 and NOP-1 without RNAi (F0) shows established polarity; NOP-1 with klp-19 RNAi shows loss of polarity domains. Cortical view of the same embryos as those above taken to show more clearly the loss of polarity domains in the NOP-1 klp-19 embryo. I’d like to thank my supervisor Josana Rodriguez and the master student Jack Martin for helping me through the project.