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POTYVIRIDAE
BY, UDAYENDU BARIK
M.Sc(Ag )Ist Yr
Admsn no. 18122L10
DEPARTMENT OF PLANT PATHOLOGY
POTYVIRIDAE
 The Potyviridae are a family of viruses that
encompasses more than 30% of known plant
viruses, many of which are of great agricultural
significance.
 Currently, more than 190 species are placed in this
family, divided among eight genera.
 The Potyviridae family is the largest of all plant
viruses families.
DIFFERENT GENERA OF FAMILY
 Based on the amino acid sequences of their
coat proteins, potyviridae is divided into ten
genera.
 Brambyvirus
 Bymovirus
 Ipomovirus
 Macluravirus
 Poacevirus
 Potyvirus
 Rymovirus
 Tritimovirus
 Roymovirus
 Brevemovirus
STRUCTURE
 They are nonenveloped, flexuous filamentous, rod-
shaped particles.
 The diameter is around 12–15 nm, with a length of
200–300 nm.
 Potyviridae genome is positive single stranded
RNA(+ ss RNA)
Genus Structure Capsid Genomic
arrange-
ment
Genomic
segmentation
Brambyvirus Filamentous Nonenveloped Linear Monopartite
Bymovirus Filamentous Nonenveloped Linear Segmented
Ipomovirus Filamentous Nonenveloped Linear Segmented
Macluravirus Filamentous Nonenveloped Linear Segmented
Poacevirus Filamentous Nonenveloped Linear Monopartite
Potyvirus Filamentous Nonenveloped Linear Monopartite
Rymovirus Filamentous Nonenveloped Linear Segmented
Tritimovirus Filamentous Nonenveloped Linear Segmented
Roymovirus Filamentous Nonenveloped Linear Monopartite
Brevemovirus Filamentous Nonenveloped Linear Segmented
BRAMBYVIRUS
 DISTINGUISHING FEATURES :-This is a monotypic
genus containing a single species Black berry virus
Y. Distinguished from all other members of the family
by having a very large P1 protein (83.6 k Da).
BYMOVIRUS
 DISTINGUISHING FEATURES :-Members of the genus
Bymovirus are distinct in having a divided (bipartite)
genome and in being transmitted by the root-infecting
parasite, Polymyxa graminis (Fungus).
LIST OF SPECISES :-
 Barley yellow mosaic virus
 Barley mild mosaic virus
 Oat mosaic virus
 Rice necrosis mosaic virus
 Wheat spindle streak mosaic virus
 Wheat yellow mosaic virus
BaYMV
IPOMOVIRUS
 DISTINGUISHING FEATURES :- Ipomoviruses are
distinguished from other genera by their mode of
transmission (whiteflies) and by phylogenetic
analyses.
LIST OF SPECISES :-
 Sweet potato mild mottle virus
 Cassava brown streak virus
 Cucumber vein yellowing virus
 Squash vein yellowing virus
SPMMV
SqVYV
MACLURAVIRUS
 DISTINGUISHING FEATURES :-Macluraviruses
resemble members of the genus Potyvirus in their
transmission by aphids but virions are slightly shorter.
They form a distinct group in phylogenetic analyses
and have different polyprotein consensus cleavage
sites.
LIST OF SPECISES :-
 Maclura mosaic virus
 Alpinia mosaic virus
 Cardamom mosaic virus
 Chinese yam necrotic mosaic virus
 Narcissus latent virus
 Ranunculus latent virus
MacMV
 DISTINGUISHING FEATURES :-The largest genus in
the family contains viruses(150+Species) transmitted
by aphids in a non-persistent manner.
 LIST OF SPECISES :-
 Potato virus Y
 Banana bract mosaic virus
 Bean common mosaic virus
 Lettuce mosaic virus
 Maize dwarf mosaic virus
 Papaya ringspot virus
 Sorghum mosaic virus
 Soybean mosaic virus
 Tobacco vein mottling virus
 Tulip mosaic virus and Many more……
PVY
POTYVIRUS
POACEVIRUS
 DISTINGUISHING FEATURES :- Poaceae plants serve
as the natural host. Currently only three species in this
genus, including the type species Triticum mosaic virus.
Triticum mosaic virus (TriMV) is transmitted by the wheat
curl mite.
 LIST OF SPECISES :-
 Triticum mosaic virus
 Sugarcane streak mosaic virus
 Caladenia virus A
TriMV
SCSMV
RYMOVIRUS
 DISTINGUISHING FEATURES :- Genus contains only
three viruses presumably transmitted by host-adapted
populations of eriophyid mite species in a semi-
persistent manner. The rymoviruses share a reciprocal
monophyletic relationship with species of the genus
Potyvirus.
 LIST OF SPECISES :-
 Ryegrass mosaic virus
 Agropyron mosaic virus
 Hordeum mosaic virus
RGMV
HoMV
TRITIMOVIRUS
 DISTINGUISHING FEATURES :- Tritimoviruses are
transmitted by mites (but different from those that
transmit rymoviruses). They form a distinctive
phylogenetic cluster.
LIST OF SPECISES :-
 Wheat streak mosaic virus
 Oat necrotic mottle virus
 Brome streak mosaic virus
 Wheat Eqlid mosaic virus
WSMV
ROYMOVIRUS
 DISTINGUISHING FEATURES :- Roymoviruses have
low nucleotide and amino acid identities with other
potyvirids.
 The nucleotide and deduced amino acid sequences of
the polyprotein share greatest identities with other
viruses in the family Potyviridae, but they are not clearly
closer to members of any particular genera in the family.
 LIST OF SPECISES :-Contain only one species
 Rose yellow mosaic virus RYMV
BREVEMOVIRUS
 DISTINGUISHING FEATURES :- Like macluraviruses,
members of the type species, Bellflower veinal mottle virus,
lack the P1 region of most potyvirids. Isolates of bellflower
veinal mottle virus share low (22–27%) nucleotide and
amino acid sequence identities to macluraviruses.
 The virus is probably not aphid transmitted.
 LIST OF SPECISES :-
 Bellflower veinal mottle virus
BVMoV
Unrooted phylogenetic tree based on the
codon-aligned nucleotide sequences of
the polyproteins of fully-sequenced
members of the family Potyviridae.
Poacevirus
Phylogenetic (distance) tree based on the codon-aligned nucleotide sequences of the
of the polyproteins of members of the family Potyviridae.
References :-
Adams, M.J., Antoniw, J.F. and Beaudoin, F. (2005). Overview and analysis of the polyprotein
cleavage sites in the family Potyviridae. Mol. Plant Pathol., 6, 471–487.
Adams, M.J., Antoniw, J.F. and Fauquet, C.M. (2005). Molecular criteria for genus and species
discrimination within the family Potyviridae. Arch. Virol., 150, 459–479.
Chung, B.Y.W., Miller, W.A., Atkins, J.F. and Firth, E.A. (2008). An overlapping essential gene in the
Potyviridae. Proc. Natl Acad. Sci., U S A, 105, 5897–5902.
French, R. and Stenger, D.C. (2005). Genome sequences of Agropyron mosaic virus and Hordeum
mosaic virus support reciprocal monophyly of the genera Potyvirus and Rymovirus in the family.
Potyviridae. Arch. Virol, 150, 299–312.
Gibbs, A. and Ohshima, K. (2010). Potyviruses and digital revolution. Annu. Rev. Phytopathol., 48,
10.1–10.19.
Kekarainen, T., Savilahti, H. and Valkonen, J.P.T. (2002). Functional genomics on Potato virus A: a
virus genome-wide map of sites essential for virus propagation. Genome Res., 12, 584–594.
ICTV(International committee on taxonomy of Viruses)
Research gate.com
Potyviridae –Wikipedia
J Gate plus
Science direct.com
Viral zone.expasy.org
Potyviridae Family of Plant Viruses

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Potyviridae Family of Plant Viruses

  • 1.
  • 2. POTYVIRIDAE BY, UDAYENDU BARIK M.Sc(Ag )Ist Yr Admsn no. 18122L10 DEPARTMENT OF PLANT PATHOLOGY
  • 3. POTYVIRIDAE  The Potyviridae are a family of viruses that encompasses more than 30% of known plant viruses, many of which are of great agricultural significance.  Currently, more than 190 species are placed in this family, divided among eight genera.  The Potyviridae family is the largest of all plant viruses families.
  • 4. DIFFERENT GENERA OF FAMILY  Based on the amino acid sequences of their coat proteins, potyviridae is divided into ten genera.  Brambyvirus  Bymovirus  Ipomovirus  Macluravirus  Poacevirus  Potyvirus  Rymovirus  Tritimovirus  Roymovirus  Brevemovirus
  • 5. STRUCTURE  They are nonenveloped, flexuous filamentous, rod- shaped particles.  The diameter is around 12–15 nm, with a length of 200–300 nm.  Potyviridae genome is positive single stranded RNA(+ ss RNA)
  • 6. Genus Structure Capsid Genomic arrange- ment Genomic segmentation Brambyvirus Filamentous Nonenveloped Linear Monopartite Bymovirus Filamentous Nonenveloped Linear Segmented Ipomovirus Filamentous Nonenveloped Linear Segmented Macluravirus Filamentous Nonenveloped Linear Segmented Poacevirus Filamentous Nonenveloped Linear Monopartite Potyvirus Filamentous Nonenveloped Linear Monopartite Rymovirus Filamentous Nonenveloped Linear Segmented Tritimovirus Filamentous Nonenveloped Linear Segmented Roymovirus Filamentous Nonenveloped Linear Monopartite Brevemovirus Filamentous Nonenveloped Linear Segmented
  • 7. BRAMBYVIRUS  DISTINGUISHING FEATURES :-This is a monotypic genus containing a single species Black berry virus Y. Distinguished from all other members of the family by having a very large P1 protein (83.6 k Da).
  • 8. BYMOVIRUS  DISTINGUISHING FEATURES :-Members of the genus Bymovirus are distinct in having a divided (bipartite) genome and in being transmitted by the root-infecting parasite, Polymyxa graminis (Fungus). LIST OF SPECISES :-  Barley yellow mosaic virus  Barley mild mosaic virus  Oat mosaic virus  Rice necrosis mosaic virus  Wheat spindle streak mosaic virus  Wheat yellow mosaic virus BaYMV
  • 9. IPOMOVIRUS  DISTINGUISHING FEATURES :- Ipomoviruses are distinguished from other genera by their mode of transmission (whiteflies) and by phylogenetic analyses. LIST OF SPECISES :-  Sweet potato mild mottle virus  Cassava brown streak virus  Cucumber vein yellowing virus  Squash vein yellowing virus SPMMV SqVYV
  • 10. MACLURAVIRUS  DISTINGUISHING FEATURES :-Macluraviruses resemble members of the genus Potyvirus in their transmission by aphids but virions are slightly shorter. They form a distinct group in phylogenetic analyses and have different polyprotein consensus cleavage sites. LIST OF SPECISES :-  Maclura mosaic virus  Alpinia mosaic virus  Cardamom mosaic virus  Chinese yam necrotic mosaic virus  Narcissus latent virus  Ranunculus latent virus MacMV
  • 11.  DISTINGUISHING FEATURES :-The largest genus in the family contains viruses(150+Species) transmitted by aphids in a non-persistent manner.  LIST OF SPECISES :-  Potato virus Y  Banana bract mosaic virus  Bean common mosaic virus  Lettuce mosaic virus  Maize dwarf mosaic virus  Papaya ringspot virus  Sorghum mosaic virus  Soybean mosaic virus  Tobacco vein mottling virus  Tulip mosaic virus and Many more…… PVY POTYVIRUS
  • 12. POACEVIRUS  DISTINGUISHING FEATURES :- Poaceae plants serve as the natural host. Currently only three species in this genus, including the type species Triticum mosaic virus. Triticum mosaic virus (TriMV) is transmitted by the wheat curl mite.  LIST OF SPECISES :-  Triticum mosaic virus  Sugarcane streak mosaic virus  Caladenia virus A TriMV SCSMV
  • 13. RYMOVIRUS  DISTINGUISHING FEATURES :- Genus contains only three viruses presumably transmitted by host-adapted populations of eriophyid mite species in a semi- persistent manner. The rymoviruses share a reciprocal monophyletic relationship with species of the genus Potyvirus.  LIST OF SPECISES :-  Ryegrass mosaic virus  Agropyron mosaic virus  Hordeum mosaic virus RGMV HoMV
  • 14. TRITIMOVIRUS  DISTINGUISHING FEATURES :- Tritimoviruses are transmitted by mites (but different from those that transmit rymoviruses). They form a distinctive phylogenetic cluster. LIST OF SPECISES :-  Wheat streak mosaic virus  Oat necrotic mottle virus  Brome streak mosaic virus  Wheat Eqlid mosaic virus WSMV
  • 15. ROYMOVIRUS  DISTINGUISHING FEATURES :- Roymoviruses have low nucleotide and amino acid identities with other potyvirids.  The nucleotide and deduced amino acid sequences of the polyprotein share greatest identities with other viruses in the family Potyviridae, but they are not clearly closer to members of any particular genera in the family.  LIST OF SPECISES :-Contain only one species  Rose yellow mosaic virus RYMV
  • 16. BREVEMOVIRUS  DISTINGUISHING FEATURES :- Like macluraviruses, members of the type species, Bellflower veinal mottle virus, lack the P1 region of most potyvirids. Isolates of bellflower veinal mottle virus share low (22–27%) nucleotide and amino acid sequence identities to macluraviruses.  The virus is probably not aphid transmitted.  LIST OF SPECISES :-  Bellflower veinal mottle virus BVMoV
  • 17. Unrooted phylogenetic tree based on the codon-aligned nucleotide sequences of the polyproteins of fully-sequenced members of the family Potyviridae. Poacevirus
  • 18. Phylogenetic (distance) tree based on the codon-aligned nucleotide sequences of the of the polyproteins of members of the family Potyviridae.
  • 19. References :- Adams, M.J., Antoniw, J.F. and Beaudoin, F. (2005). Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol. Plant Pathol., 6, 471–487. Adams, M.J., Antoniw, J.F. and Fauquet, C.M. (2005). Molecular criteria for genus and species discrimination within the family Potyviridae. Arch. Virol., 150, 459–479. Chung, B.Y.W., Miller, W.A., Atkins, J.F. and Firth, E.A. (2008). An overlapping essential gene in the Potyviridae. Proc. Natl Acad. Sci., U S A, 105, 5897–5902. French, R. and Stenger, D.C. (2005). Genome sequences of Agropyron mosaic virus and Hordeum mosaic virus support reciprocal monophyly of the genera Potyvirus and Rymovirus in the family. Potyviridae. Arch. Virol, 150, 299–312. Gibbs, A. and Ohshima, K. (2010). Potyviruses and digital revolution. Annu. Rev. Phytopathol., 48, 10.1–10.19. Kekarainen, T., Savilahti, H. and Valkonen, J.P.T. (2002). Functional genomics on Potato virus A: a virus genome-wide map of sites essential for virus propagation. Genome Res., 12, 584–594. ICTV(International committee on taxonomy of Viruses) Research gate.com Potyviridae –Wikipedia J Gate plus Science direct.com Viral zone.expasy.org