06.11.14 Presentation National LambdaRail Booth Supercomputing 2006 Title: OptIPuter: Metagenomics at Light Speed Tampa, FL

1. OptIPuter: Metagenomics at Light Speed Presentation National LambdaRail Booth Supercomputing 2006 Tampa, FL November 14, 2006 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD

4. Most of Evolutionary Time Was in the Microbial World Source: Carl Woese, et al Tree of Life Derived from 16S rRNA Sequences You Are Here

6. Marine Genome Sequencing Project – Measuring the Genetic Diversity of Ocean Microbes Sorcerer II Data Will Double Number of Proteins in GenBank! Need Ocean Data

7. PI Larry Smarr Announced January 17, 2006 $24.5M Over Seven Years

11. Use of OptIPortal to Interactively View Microbial Genome Source: Raj Singh, UCSD Acidobacteria bacterium Ellin345 (NCBI) Soil Bacterium 5.6 Mb 15,000 x 15,000 Pixels

12. Use of OptIPortal to Interactively View Microbial Genome Source: Raj Singh, UCSD Acidobacteria bacterium Ellin345 (NCBI) Soil Bacterium 5.6 Mb 15,000 x 15,000 Pixels

13. Use of OptIPortal to Interactively View Microbial Genome Source: Raj Singh, UCSD Acidobacteria bacterium Ellin345 (NCBI) Soil Bacterium 5.6 Mb 15,000 x 15,000 Pixels

14. Calit2 is Now OptIPuter Connecting Remote Moore-Funded Microbial Researchers with OptIPortals NW! CICESE UW JCVI MIT SIO UCSD SDSU UIC EVL UCI OptIPortals OptIPortal

15. A Near Future Metagenomics Fiber Optic-Enabled Data Generator Source John Delaney, UWash

16. Countries are Aggressively Creating Gigabit Services: Interactive Access to CAMERA Data System www.glif.is Created in Reykjavik, Iceland 2003 Visualization courtesy of Bob Patterson, NCSA.