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Optimal Transport-driven CycleGAN for
Unsupervised Learning
in Inverse Problems
.LP-DHFKXO*UDGXDWH6FKRRORI$,
Dept. of Bio/Brain Engineering
Dept. of Mathematical Sciences
Classical Learning vs Deep Learning
D
Diagnosis
Classical machine learning
Deep learning
(no feature engineering)
Feature
Engineering
Esteva et al, Nature Medicine, (2019)
Deep Learning for Scientific Discovery
D
Diagnosis
Diagnosis  analysis
New frontiers of deep learning: inverse problems
Penalized LS for Inverse Problems
Likelihood term
Data fidelity term
Prior term
Regularization term
 Classical approaches for inverse problems
 Tikhonov, TV, Compressed sensing
 Top-down model
 Transductive  non-inductive
 Computational expensive
Feed-Forward Neural Network Approaches
 CNN as a direct inverse operation
 Most simplest and fastest method
 Supervised learning with lots of data
Model-based, PnP using CNN Prior
Likelihood term
Data fidelity term
CNN based regularization
 CNN is used as a denoiser
 Can use relative small CNNs  fewer training data
 Supervised learning
 Still iterative
Aggarwal et al, IEEE TMI, 2018; Liu et al, IEEE JSTSP, 2020; Wu et al, IEEE JSTSP, 2020
Deep Image Prior (DIP)
 CNN architecture as a regularization
 Unsupervised learning
 Extensive computation  PLS
Ulyanov et al, CVPR, 2018
Unsupervised
Feed-forward CNN?
Yann LeCun’s Cake Analogy
Slide courtesy of Yann LeCun’s ICIP 2019 talk
Why Unsupervised Learning in Inverse Problems?
Low-dose CT
Remote sensing
Metal artifact removal
Blind deconvolution
Sim et al, arXiv:1909.12116, 2019, Lee et al, arXiv:2007.03480, 2020
Forward physics
(unknown, partially known, known)
inverse solution
Our Geometric View of Unsupervised Learning
Geometry of GAN
subject to
Lei, Na, arXiv:1710.05488 (2017)
Statistical Distances
f-Divergence
Wasserstein-1 metric
GAN, f-GAN
W-GAN
divergence
metric
Absolute Continuity
Optimal Transport
: A Gentle Review
Optimal Transport
Transportation map
Push-Forward of a Measure
Optimal Transport: Monge
Monge’s Original OT
 Difficulty from the push-forward constraint
Transportation cost
Optimal Transport: Kantorovich
Kantorovich’s OT
 Allows mass splitting
 Probabilistic OT
 Linear programming  Nobel prize in economy
Transportation
cost
Joint
distribution
Kantorovich Dual Formulation
c-transform
marginal distribution
Kantorovich potential
Wasserstein-1 Metric and Its Dual
Kantorovich
Dual
1-Lipschitz. (Lip1)
Wasserstein GAN with Gradient Penalty
1-Lipschitz penalty
generator
discriminator
Generative Adversarial Nets (GANs)
Generator (transport map)
Discriminator
(Kantorovich Potential)
https://www.cfml.se/blog/generative_adversarial_networks/
Geometry of CycleGAN
Sim et al, arXiv:1909.12116, 2019
Khan et al, arXiv:2006.14773, 2020
Lee et al, arXiv:2007.03480, 2020
Geometry of CycleGAN
Sim et al, arXiv:1909.12116, 2019, Lee et al, arXiv:2007.03480, 2020
Forward physics
(unknown, partially known, known)
inverse solution
Two Wasserstein Metrics in Unsupervised Learning
Joint Minimization CycleGAN
Dual formulation Sim et al, arXiv:1909.12116, 2019
CycleGAN: Loss Function
1-Lipschitz
Cycle-consistency Discriminators
Forward operator
 Unknown
 Partial known
 known
CycleGAN vs Penalized LS
Data fidelity term
Regularization term
Data fidelity term Regularization term
CycleGAN
PLS
y
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CycleGAN can be considered as
stochastic generalization of PLS
Multiphase Cardiac CT denoising
 Phase 1, 2: low-dose, Phase 3 ~ 10: normal dose
 Goal: dynamic changes of heart structure
 No reference available
Kang et al, Medical Physics, 2018
Case 1: Unsupervised Denoising for Low-Dose CT
Unsupervised Denoising by CycleGAN
Kang et al, Medical Physics, 2019
Lose dose (5%)  high dose






Input: phase 1 Proposed Target: phase 8 Input- output
(a) (b) (c) (d)
(e) (f) (g) (h)
Input: phase 1 Proposed Without
identity loss
GAN
Ablation Study
Input: phase 1 Proposed Without
identity loss
GAN
Ablation Study
(a) (b) (c) (d)
(e) (f) (g) (h)
Case 2: Unsupervised Deconvolution Microscopy
Lim et al, IEEE TCI, 2020
R
Results on Real Microscopy Data
 Qualitative results
Lim et al, IEEE TCI, 2020
Case 3: Unsupervised Learning for Accelerated MRI
Sim et al, arXiv:1909.12116, 2019

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Optimal transport driven CycleGAN for unsupervised learning in inverse problems

  • 1. O Optimal Transport-driven CycleGAN for Unsupervised Learning in Inverse Problems
  • 2. .LP-DHFKXO*UDGXDWH6FKRRORI$, Dept. of Bio/Brain Engineering Dept. of Mathematical Sciences
  • 3. Classical Learning vs Deep Learning D Diagnosis Classical machine learning Deep learning (no feature engineering) Feature Engineering Esteva et al, Nature Medicine, (2019)
  • 4. Deep Learning for Scientific Discovery D Diagnosis Diagnosis analysis New frontiers of deep learning: inverse problems
  • 5. Penalized LS for Inverse Problems Likelihood term Data fidelity term Prior term Regularization term Classical approaches for inverse problems Tikhonov, TV, Compressed sensing Top-down model Transductive non-inductive Computational expensive
  • 6. Feed-Forward Neural Network Approaches CNN as a direct inverse operation Most simplest and fastest method Supervised learning with lots of data
  • 7. Model-based, PnP using CNN Prior Likelihood term Data fidelity term CNN based regularization CNN is used as a denoiser Can use relative small CNNs fewer training data Supervised learning Still iterative Aggarwal et al, IEEE TMI, 2018; Liu et al, IEEE JSTSP, 2020; Wu et al, IEEE JSTSP, 2020
  • 8. Deep Image Prior (DIP) CNN architecture as a regularization Unsupervised learning Extensive computation PLS Ulyanov et al, CVPR, 2018
  • 10. Yann LeCun’s Cake Analogy Slide courtesy of Yann LeCun’s ICIP 2019 talk
  • 11. Why Unsupervised Learning in Inverse Problems? Low-dose CT Remote sensing Metal artifact removal Blind deconvolution
  • 12. Sim et al, arXiv:1909.12116, 2019, Lee et al, arXiv:2007.03480, 2020 Forward physics (unknown, partially known, known) inverse solution Our Geometric View of Unsupervised Learning
  • 13. Geometry of GAN subject to Lei, Na, arXiv:1710.05488 (2017)
  • 16. Optimal Transport : A Gentle Review
  • 18. Push-Forward of a Measure
  • 19. Optimal Transport: Monge Monge’s Original OT Difficulty from the push-forward constraint Transportation cost
  • 20. Optimal Transport: Kantorovich Kantorovich’s OT Allows mass splitting Probabilistic OT Linear programming Nobel prize in economy Transportation cost Joint distribution
  • 21. Kantorovich Dual Formulation c-transform marginal distribution Kantorovich potential
  • 22. Wasserstein-1 Metric and Its Dual Kantorovich Dual 1-Lipschitz. (Lip1)
  • 23. Wasserstein GAN with Gradient Penalty 1-Lipschitz penalty generator discriminator
  • 24. Generative Adversarial Nets (GANs) Generator (transport map) Discriminator (Kantorovich Potential) https://www.cfml.se/blog/generative_adversarial_networks/
  • 25. Geometry of CycleGAN Sim et al, arXiv:1909.12116, 2019 Khan et al, arXiv:2006.14773, 2020 Lee et al, arXiv:2007.03480, 2020
  • 26. Geometry of CycleGAN Sim et al, arXiv:1909.12116, 2019, Lee et al, arXiv:2007.03480, 2020 Forward physics (unknown, partially known, known) inverse solution
  • 27. Two Wasserstein Metrics in Unsupervised Learning
  • 28. Joint Minimization CycleGAN Dual formulation Sim et al, arXiv:1909.12116, 2019
  • 29. CycleGAN: Loss Function 1-Lipschitz Cycle-consistency Discriminators Forward operator Unknown Partial known known
  • 30. CycleGAN vs Penalized LS Data fidelity term Regularization term Data fidelity term Regularization term CycleGAN PLS y D D D D D D D D D Da a a a a a at t t t t t t t t ta a a a a a a f f f f f f f f f f fi i i i i i i i i id d d d d d d d d d de e e e e e el l l l l l l l l l li i i i i i i i i it t t t t t t t t ty y y y y y y y t t t t t t t t t te e e e e e er r r r r r rm m m m m m m y R R R R R R R R R R R R Re e e e e e e e e e eg g g g g g g g g g g g gu u u u u u u u u u ul l l l l l l l l l l l la a a a a a a a a a ar r r r r r r r r r ri i i i i i i i i i i i iz z z z z z z z z z za a a a a a a a a a at t t t t t t t t t t t ti i i i i i i i i i i i io o o o o o o o o o on n n n n n n n n n n t t t t t t t t t t t t te e e e e e e e e e er r r r r r r r r r rm m m m m m m m m m m CycleGAN can be considered as stochastic generalization of PLS
  • 31. Multiphase Cardiac CT denoising Phase 1, 2: low-dose, Phase 3 ~ 10: normal dose Goal: dynamic changes of heart structure No reference available Kang et al, Medical Physics, 2018 Case 1: Unsupervised Denoising for Low-Dose CT
  • 32. Unsupervised Denoising by CycleGAN Kang et al, Medical Physics, 2019
  • 33. Lose dose (5%) high dose Input: phase 1 Proposed Target: phase 8 Input- output
  • 34. (a) (b) (c) (d) (e) (f) (g) (h) Input: phase 1 Proposed Without identity loss GAN Ablation Study
  • 35. Input: phase 1 Proposed Without identity loss GAN Ablation Study (a) (b) (c) (d) (e) (f) (g) (h)
  • 36. Case 2: Unsupervised Deconvolution Microscopy Lim et al, IEEE TCI, 2020
  • 37. R Results on Real Microscopy Data Qualitative results
  • 38.
  • 39. Lim et al, IEEE TCI, 2020
  • 40. Case 3: Unsupervised Learning for Accelerated MRI Sim et al, arXiv:1909.12116, 2019
  • 41. R Results on Fast MR Data Set Sim et al, arXiv:1909.12116, 2019
  • 42. Summary Unsupervised learning becomes very important topics in deep image reconstruction Our theoretical findings Optimal transport is an important mathematical tool for designing unsupervised networks CycleGAN can be derived by minimizing two Wasserstein-1 distances in input and target spaces Variation extensions of CycleGAN Geometric view can be generalized for other problems