The document summarizes the implementation of a global documentation system called GRIN-Global at the Portuguese Plant Genetic Resources bank in Portugal. It describes loading passport and inventory data for over 2,400 accessions across various crop collections. System functionality was analyzed and initial testing was performed before full implementation. Training and data uploads were conducted over multiple years. System upgrades required support to migrate data successfully. Recommendations include following implementation steps, ensuring long-term support, proper training, and developing tools to facilitate upgrades.
GVK BIO is a pioneer in the field of scientific database development and is known for its BioIT services. BioIT converts information to knowledge for usage in Discovery & Development. It integrates data from multi-disciplinary areas using Science and Information Technology.
GVK BIO is a pioneer in the field of scientific database development and is known for its BioIT services. BioIT converts information to knowledge for usage in Discovery & Development. It integrates data from multi-disciplinary areas using Science and Information Technology.
PG Day'14 Russia, PostgreSQL как платформа для разработки приложений, часть 3...pgdayrussia
Доклад был представлен на официальной российской конференции PG Day'14 Russia, посвященной вопросам разработки и эксплуатации PostgreSQL.
Уникальный семинар от опытного "базиста" Ивана Фролкова призван наглядно пояснить слушателям адекватность применения реляционных СУБД на задачах веба. В рамках доклада Иван рассмотрит типичные "грабли", на которые натыкаются разработчики, и субоптимальные решения, изобретаемые с целью побороть возникшие проблемы. В качестве альтернативы, коллега Фролков наглядно пояснит, как эти же задачи решаются штатными средствами PostgreSQL.
В качестве бонуса Иван — "ветеран" промышленной разработки ПО для реляционных СУБД — проведет краткий ликбез по рекомендуемым практикам построения SQL-запросов и программирования на языке PL/PGSQL.
10 Content Creation Tactics For When The Well Runs DryAutomated Insights
Everyone knows content is king – but when you’re faced with deadlines and writer’s block, content can seem like a tyrant. It’s time to put the monarchy back in its place. This webinar covers 10 essential tactics you can use to generate new content ideas, fast.
Learn how to get your creative juices flowing even when you don’t feel like writing a word. Explore new ways to approach your content.
Softworks (www.softworksbd.com), a Bangladeshi software development company who are working on developing innovative applications in smartphone - iPhone/iPAD, Android, Windows & J2ME development and interactive Dashboard: Charts & Maps from any database/XML feed to overlay of data on Divisional/District/Upazila/Constituency Maps. Currently Softworks is working as an IT services subcontractor of Strengthening Pharmaceutical Systems (SPS) program of Bangladesh for Management Science for Health (MSH) funded by USAID who are providing MIS services to maintain DGFP procurement and logistics system a network of 21 warehouses and 483 Upazila stores.
Manufacturing data requirements for supply chain origin, ingredients, and processes has in the past been applied primarily to food, beverage and pharmaceutical. Now, these requirements are being driven by regulatory agencies and the end user to ensure product safety in the automotive, life sciences and consumer packaged goods industry sectors.
Putting Research into Practice: The Plant Breeding and Genomics Community of ...jfuzzy
A slideshow describing the Plant Breeding and Genomics Community of Practice with eXtension presented at the eXtension Workshop 2011. Find us at http://www.extension.org/plant_breeding_genomics
Seeking an opportunity to further my experience within the Information Technology and Life Sciences industries that utilizes my knowledge and skills in the areas of TrackWise configuration, validation, systems administration, and technical writing.
BioStatFlow is a web application useful to analyze "OMICS", including metabolomics, data with statistical methods.
BioStatFlow is available online: http://biostatflow.org
Process and Regulated Processes Software Validation ElementsArta Doci
Medical device manufacturers operate in a competitive marketplace with increasing end-user demands for features and usability and in a highly regulated environment.
Regulatory bodies look for evidence that medical devices are developed under a structured, quality-oriented development process. By following software validation and verification best practices, one can not only increase the likelihood that they will meet their compliance goals, they can also enhance developer productivity.
Migrating clinical studies from one database to another (such as Oracle Clinical to Oracle Clinical or Oracle Clinical to Oracle InForm or Medidata Rave), is a complex process that requires a thorough understanding of clinical data management, technology, and the regulations that govern clinical trials.
In this SlideShare on clinical study migrations we:
Discuss reasons to migrate a clinical study
Provide an overview of the clinical study migration process
Look at validation, technical, and business considerations for migrating a clinical study
Present real-world case studies
PG Day'14 Russia, PostgreSQL как платформа для разработки приложений, часть 3...pgdayrussia
Доклад был представлен на официальной российской конференции PG Day'14 Russia, посвященной вопросам разработки и эксплуатации PostgreSQL.
Уникальный семинар от опытного "базиста" Ивана Фролкова призван наглядно пояснить слушателям адекватность применения реляционных СУБД на задачах веба. В рамках доклада Иван рассмотрит типичные "грабли", на которые натыкаются разработчики, и субоптимальные решения, изобретаемые с целью побороть возникшие проблемы. В качестве альтернативы, коллега Фролков наглядно пояснит, как эти же задачи решаются штатными средствами PostgreSQL.
В качестве бонуса Иван — "ветеран" промышленной разработки ПО для реляционных СУБД — проведет краткий ликбез по рекомендуемым практикам построения SQL-запросов и программирования на языке PL/PGSQL.
10 Content Creation Tactics For When The Well Runs DryAutomated Insights
Everyone knows content is king – but when you’re faced with deadlines and writer’s block, content can seem like a tyrant. It’s time to put the monarchy back in its place. This webinar covers 10 essential tactics you can use to generate new content ideas, fast.
Learn how to get your creative juices flowing even when you don’t feel like writing a word. Explore new ways to approach your content.
Softworks (www.softworksbd.com), a Bangladeshi software development company who are working on developing innovative applications in smartphone - iPhone/iPAD, Android, Windows & J2ME development and interactive Dashboard: Charts & Maps from any database/XML feed to overlay of data on Divisional/District/Upazila/Constituency Maps. Currently Softworks is working as an IT services subcontractor of Strengthening Pharmaceutical Systems (SPS) program of Bangladesh for Management Science for Health (MSH) funded by USAID who are providing MIS services to maintain DGFP procurement and logistics system a network of 21 warehouses and 483 Upazila stores.
Manufacturing data requirements for supply chain origin, ingredients, and processes has in the past been applied primarily to food, beverage and pharmaceutical. Now, these requirements are being driven by regulatory agencies and the end user to ensure product safety in the automotive, life sciences and consumer packaged goods industry sectors.
Putting Research into Practice: The Plant Breeding and Genomics Community of ...jfuzzy
A slideshow describing the Plant Breeding and Genomics Community of Practice with eXtension presented at the eXtension Workshop 2011. Find us at http://www.extension.org/plant_breeding_genomics
Seeking an opportunity to further my experience within the Information Technology and Life Sciences industries that utilizes my knowledge and skills in the areas of TrackWise configuration, validation, systems administration, and technical writing.
BioStatFlow is a web application useful to analyze "OMICS", including metabolomics, data with statistical methods.
BioStatFlow is available online: http://biostatflow.org
Process and Regulated Processes Software Validation ElementsArta Doci
Medical device manufacturers operate in a competitive marketplace with increasing end-user demands for features and usability and in a highly regulated environment.
Regulatory bodies look for evidence that medical devices are developed under a structured, quality-oriented development process. By following software validation and verification best practices, one can not only increase the likelihood that they will meet their compliance goals, they can also enhance developer productivity.
Migrating clinical studies from one database to another (such as Oracle Clinical to Oracle Clinical or Oracle Clinical to Oracle InForm or Medidata Rave), is a complex process that requires a thorough understanding of clinical data management, technology, and the regulations that govern clinical trials.
In this SlideShare on clinical study migrations we:
Discuss reasons to migrate a clinical study
Provide an overview of the clinical study migration process
Look at validation, technical, and business considerations for migrating a clinical study
Present real-world case studies
Presentaion for NetBio SIG 2013 by Robin Haw, Scientific Associate and Outreach Coordinator, Ontario Institute for Cancer Research. “Reactome Knowledgebase and Functional Interaction (FI) Cytoscape Plugin”
Next-Generation Bioprocessing Monitoring to Enable Smart Data Management and ...Merck Life Sciences
Watch this webinar here: https://bit.ly/2ZpV3GU
Biopharmaceutical processes are complex and highly variable in nature. This can result in inconsistent and unpredictable process outcomes. To manage complexity and better understand causes of variability, in-depth knowledge and thorough understanding of the process is critical. Bio4C™ ProcessPad provides the data integration, analysis and sharing across the manufacturing network and end-to-end data management throughout the process lifecycle required for continued process verification, reporting, and analytics.
Bio4C™ ProcessPad is a data visualization, analytics, and process monitoring platform that enables bioprocess lifecycle management, reporting, investigations, and continued process verification (CPV). Intelligently combining process data from batches, Enterprise Resource Planning (ERP), Manufacturing Execution System (MES), Laboratory Information Management System (LIMS), Historian, process equipment, and manual sources into a single, validated data source, Bio4C™ ProcessPad ensures data is current, complete, and contextual throughout the product lifecycle.
In this webinar, you will learn:
• Introduction to Next Generation BioContinuum™ Digital Platform and Bio4C™ Software Suite
• Overview of Bioprocess lifecycle and present biomanufacturing data management challenges
• Introduction to the Bio4C™ ProcessPad digital platform and its modules and features
• Benefits of Bio4C™ ProcessPad in investigations, process monitoring, continued process verification (CPV) and CDMO operations
Next-Generation Bioprocessing Monitoring to Enable Smart Data Management and ...MilliporeSigma
Watch this webinar here: https://bit.ly/2ZpV3GU
Biopharmaceutical processes are complex and highly variable in nature. This can result in inconsistent and unpredictable process outcomes. To manage complexity and better understand causes of variability, in-depth knowledge and thorough understanding of the process is critical. Bio4C™ ProcessPad provides the data integration, analysis and sharing across the manufacturing network and end-to-end data management throughout the process lifecycle required for continued process verification, reporting, and analytics.
Bio4C™ ProcessPad is a data visualization, analytics, and process monitoring platform that enables bioprocess lifecycle management, reporting, investigations, and continued process verification (CPV). Intelligently combining process data from batches, Enterprise Resource Planning (ERP), Manufacturing Execution System (MES), Laboratory Information Management System (LIMS), Historian, process equipment, and manual sources into a single, validated data source, Bio4C™ ProcessPad ensures data is current, complete, and contextual throughout the product lifecycle.
In this webinar, you will learn:
• Introduction to Next Generation BioContinuum™ Digital Platform and Bio4C™ Software Suite
• Overview of Bioprocess lifecycle and present biomanufacturing data management challenges
• Introduction to the Bio4C™ ProcessPad digital platform and its modules and features
• Benefits of Bio4C™ ProcessPad in investigations, process monitoring, continued process verification (CPV) and CDMO operations
Smart Data Management and Advanced Analytics with Bio4C™ ProcessPadMilliporeSigma
Watch the recording of this webinar here: https://bit.ly/2XFhqGj
Smart data management software, such as Bio4C™ ProcessPad, acquires data from disparate sources (paper records, spreadsheets, databases, LIMS, QMS, machine data) and automatically aggregates it into analysis-ready format for data visualization & analysis.
Now Bio4C™ ProcessPad’s advanced multivariate analytics capabilities enable quick identification of outlier batches within 100s of critical performance parameters and quality attributes and helps determine which process attributes are contributing to process variability.
Bio4C™ ProcessPad is a data visualization, advanced analytics, and process monitoring platform that enables bioprocess lifecycle management, reporting, investigations, and continued process verification (CPV). Intelligently combining process data from batches, ERP, MES, LIMS, Historians, process equipment, and manual sources into a single, validated data source, Bio4C™ ProcessPad ensures data is current, complete, and contextual throughout the product lifecycle.
In this webinar, you will learn about:
• Next generation bioprocessing and the BioContinuum™ Platform
• Bio4C™ ProcessPad data management software – capabilities around CPV, reporting, and process lifecycle management
• Statistical process control case studies - yield variability and instrument maintenance
• Advanced analytics (outlier detection using PCA and anomaly pattern search against historical data)
Smart Data Management and Advanced Analytics with Bio4C™ ProcessPadMerck Life Sciences
Watch the recording of this webinar here: https://bit.ly/2XFhqGj
Smart data management software, such as Bio4C™ ProcessPad, acquires data from disparate sources (paper records, spreadsheets, databases, LIMS, QMS, machine data) and automatically aggregates it into analysis-ready format for data visualization & analysis.
Now Bio4C™ ProcessPad’s advanced multivariate analytics capabilities enable quick identification of outlier batches within 100s of critical performance parameters and quality attributes and helps determine which process attributes are contributing to process variability.
Bio4C™ ProcessPad is a data visualization, advanced analytics, and process monitoring platform that enables bioprocess lifecycle management, reporting, investigations, and continued process verification (CPV). Intelligently combining process data from batches, ERP, MES, LIMS, Historians, process equipment, and manual sources into a single, validated data source, Bio4C™ ProcessPad ensures data is current, complete, and contextual throughout the product lifecycle.
In this webinar, you will learn about:
• Next generation bioprocessing and the BioContinuum™ Platform
• Bio4C™ ProcessPad data management software – capabilities around CPV, reporting, and process lifecycle management
• Statistical process control case studies - yield variability and instrument maintenance
• Advanced analytics (outlier detection using PCA and anomaly pattern search against historical data)
Everything Counts in Large Amounts: Measuring the Impact of Usage Activity in...OpenAIRE
OpenAIRE usage statistics session slides at #DI4R2017. 1 Dec. 2017 - by Dimitris Pierrakos, Athena Research Center and Jochen Schirrwagen, Bielefeld University.
Similar to GRIN-Global Status I, INIAV 2016 February (20)
CIP Poster Genebank Data Management. A Digital Genebank: Information Management & Hardware Technology.
- What data is stored?
- What data is published?
- How is data colected?
AGENDA
Curator considerations for germplasm images
--Include a color calibration chart
--Include a measure tape
--Include a barcode label
--Include a watermark and a standard background color
--Draft guidelines for germplasm images
Data manager considerations for germplasm images
--CIP policy for images
--Update file image properties (metadata) with ExifTool: Authors and Copyright
--Upload image metadata on Genesys: Using a quick guide
Linking in Vitro inventories with bulk media culture.pptxEdwin Rojas
Enable the tracking of contamination of in Vitro culture media in the whole process of plant propagation and helps to decrease the spread of plant parasites. This link between inventory and bulk media culture allow detect the origin of contamination (which bulk media culture was used, when was prepared, technician in charge,…) and localize other inventories contaminated.
This presentation by Morris Kleiner (University of Minnesota), was made during the discussion “Competition and Regulation in Professions and Occupations” held at the Working Party No. 2 on Competition and Regulation on 10 June 2024. More papers and presentations on the topic can be found out at oe.cd/crps.
This presentation was uploaded with the author’s consent.
Acorn Recovery: Restore IT infra within minutesIP ServerOne
Introducing Acorn Recovery as a Service, a simple, fast, and secure managed disaster recovery (DRaaS) by IP ServerOne. A DR solution that helps restore your IT infra within minutes.
0x01 - Newton's Third Law: Static vs. Dynamic AbusersOWASP Beja
f you offer a service on the web, odds are that someone will abuse it. Be it an API, a SaaS, a PaaS, or even a static website, someone somewhere will try to figure out a way to use it to their own needs. In this talk we'll compare measures that are effective against static attackers and how to battle a dynamic attacker who adapts to your counter-measures.
About the Speaker
===============
Diogo Sousa, Engineering Manager @ Canonical
An opinionated individual with an interest in cryptography and its intersection with secure software development.
Sharpen existing tools or get a new toolbox? Contemporary cluster initiatives...Orkestra
UIIN Conference, Madrid, 27-29 May 2024
James Wilson, Orkestra and Deusto Business School
Emily Wise, Lund University
Madeline Smith, The Glasgow School of Art
Have you ever wondered how search works while visiting an e-commerce site, internal website, or searching through other types of online resources? Look no further than this informative session on the ways that taxonomies help end-users navigate the internet! Hear from taxonomists and other information professionals who have first-hand experience creating and working with taxonomies that aid in navigation, search, and discovery across a range of disciplines.
12. Collections Total
Cereals 719
Forrages 121
Fruits 37
Grain Legumes 734
Medicinal and Aromatic Plants 47
Oil crops 41
Ornamentals 63
Vegetables 653
Other species 57
Total 2 472
13.
14.
15. Identification of functionalities needs
Indexing of data
to relate the information from your genebank into the system
Load the data inventory
first start with the accession-level passport data for all collections
maintained in the genebank, inventory data and secondly plan f
or the remaining related datasets - such as characterization,
evaluation, molecular data.
Public web site launching
16. Analysis of the procedures in the genebank
Business Concepts (Taxonomy, Accession, Collection, Curator,
Passport, …
Actual Data Base (Organized by species, File Maker and Excel)
Business Process
17. Reasoning for the implementation
Created by USDA/ARS, with Bioversity International that
coordinated testing and feedback from the international
genebank community, with the Crop Trust.
Royalty free, it can be world-wide, permission to use, to copy
and/or modify.
Result analysis and decision
Main of he functionalities support BPGV and
ISOplexis needs
18. Indexing of data
• Design base files, in excel, for gathering the existing passport and
inventory data
• Creation of script files, in “excel” and “txt”, to transform the data,
from the base files to the import wizards tools format
• Developing views, in Admin Tool, to use in Curator Tool
Base File
Import File 00512-BPGV
BPGV00512
19. • Building preliminary data: code groups (codes for active and base
collection), cooperators and taxonomy
• Initial tests performed with a sample of 40 Accessions
• Validation of the imported information
• Corrections in de script files
• Load all the accession’s passport and inventory data
Inventory
20. 2011 Training in June 2011 in BPGV and in ISOplexis
October/2015 Accessions e Inventory data upload
Dez/2015 Public web site on-line
2013 Evaluation of system capacity to genebanks needs:
functionality analysis and platform functionalities
21. Change version from 1.7.2 to 1.9.4
without loosing the data
This process has taken sometime and encountered some
difficulties,
but with the support of Juan Carlos and the João Oliveira and
José Lima it was possible to test and change.
22. Proposal and Suggestions for new functionalities
• Include decimal values in sample quantity
(already implemented by our suggestion)
• To build a migration tool for version upgrade
• Develop “specific forms”, supported in the GG
tables, to manage accessions stocks ( inputs and
outputs) in the different conservation conditions
and collections.
23. Recomendations
• Follow the implementation process in its four steps:
1) System Evaluation Training;
2) Functionality Analysis;
3) Implementation Decision;
4) Planning Next Steps;
• Ensure national and institutional recognition and long
term support;
• Genebank operations budget to include budget line for
documentation and information management activities;
• Proper training of genebank staff on the GG tools;
24. Recomendations
• Document your change processes and data index -
make your own ‘GRIN-Global [Name] Data Dictionary’;
• Establishment of a community of practices for GRIN-
Global development and users;
• To facilitate upgrading the priority must be to build a
migration tool for version upgrade;
• Long term support from USDA, TRUST and Bioversity
International, for adoption and implementation.