GENETIC SCREENING & GENE THERAPYGenetic screening &   	Gene therapyDr. Dinesh TJunior resident,Department of Physiology, JIPMERDr sclerodinesh
    Introduction
HistoryTechnology to detect and treat inborn diseases - 1961. 1972 Friedmann and Roblin authored a paper in Science titled "Gene therapy for human genetic disease?“The late 1980's, an international team of scientists began the project to map the human genome.September 14, 1990 - first approved gene therapy case in the United States took place.
1992 - Doctor Claudio Bordignon, Milan, Italy performed the first procedure of gene therapy using hematopoietic stem cells.1995 DNA testing in forensic cases gains fame in the O.J. Simpson trial. 2002 - first successful gene therapy treatment for adenosine deaminase-deficiency (SCID)2003 – at University of California, Los Angeles research team inserted genes into the brain using liposome coated in a polymer called polyethylene glycol
2006 - Preston Nix from the University of Pennsylvania School of Medicine reported on VRX496, a gene-based immunotherapy for the treatment of human immunodeficiency virus (HIV) that uses a lentiviral vector for delivery of an antisense gene against the HIV envelope 2007 – Moorfields Eye Hospital and University College London's Institute of Ophthalmology announced the world's first gene therapy trial for inherited retinal disease 2008 there were more than 1,200 clinically applicable genetic tests available.
Genetic screening
What is genetic screening?The newest and most sophisticated of the techniques used to test for genetic disorders. One of the fastest moving fields in medical science.A technique to determine the genotype or phenotype of an organism.Determines risk of having or passing on a genetic disorder.
Genetic screeningGenetic screening  is often used to detect faulty or     abnormal genes in an organismCan detect some genes related to an increasedrisk of cancerCan detect some genes known to cause geneticdisorders
Genetic tests    The analysis of chromosomes (DNA), proteins, and certain metabolites in order to detect heritable disease-related genotypes, mutations, phenotypes, or karyotype for clinical purposes.
Gene tests (also called DNA-based tests), in a broader senseDirect examination of the DNA molecule Biochemical tests for such gene products as enzymes and other proteinsMicroscopic examination of stained or fluorescent chromosomes
Genetic tests Who can order?What are the samples needed?How to interpret the tests?What are all the risks?Ethical considerations?
Types of screening tests   Carrier screening
   Prenatal diagnostic testing
   Newborn screening
   Pre symptomatic testing for predicting adult-onset      disorders such as Huntington's disease   Pre symptomatic testing for estimating the risk of      developing Adult-onset cancers and Alzheimer's disease.  Conformational diagnosis of a symptomatic individual
  Pre implantation genetic diagnosis
  Forensic/ identity testing
  Research
  Pharmacogenomics
Genetic screeningAdult Polycystic Kidney Disease Alpha-1-antitrypsin deficiency Amyotrophic lateral sclerosis Alzheimer's diseaseAtaxia telangiectasiaCentral Core DiseaseCharcot-Marie-Tooth diseaseCongenital adrenal hyperplasia Cystic fibrosis Duchenne muscular dystrophy/Becker muscular dystrophy DystoniaEmanuel SyndromeFanconianemia, group C Factor V-Leiden Fragile X syndrome Gaucher disease Hereditary HemochromatosisHuntington's disease Hereditary nonpolyposis colon cancerHemophilia A and B Inherited breast and ovarian cancerMarfan SyndromeMucopolysaccharidosiMyotonic dystrophy Neurofibromatosis type 1 PhenylketonuriaPolycystic Kidney DiseasePraderWilli/Angelman syndromes Sickle cell disease Spinocerebellar ataxia, type Spinal muscular atrophy Tay-Sachs Disease ThalassemiasTimothy Syndrome Galactosemia
Methods for prenatal screening
Indications for prenatal diagnosis   Abnormal results in prenatal screening
   Previous child with a chromosome abnormality       (probability of translocation carrier in parents)   Family history of a chromosome abnormality
   Family history of a single gene disorder
   Family history of neural tube defect or other     congenital abnormalities
Newborn Screening Tests:Maple Syrup Urine DiseaseCongenital Adrenal HyperplasiaCongenital HypothyroidismGlactosemiaBiotinidase DeficiencyHomocystinuriaPhylketonuria (PKU)Sickle cell and Other Hemoglobinopathies
Pre implantation Genetic Diagnosis (PGD)Pre implantation Genetic Diagnosis (PGD) uses in vitro fertilisation (IVF) to create embryos.Tests one or two cells from each embryo for a specific genetic abnormality.Identifies unaffected embryos for transfer to the uterus.The approach through PGD assists couples at risk of an inherited disorder to avoid the birth of an affected child without going through selective pregnancy termination.
Pros and cones of gene testing   To clarify a diagnosis and direct a physician
  To avoid having children with devastating diseases
  Identify people at high risk
Provide doctors with a simple diagnostic test
Transforming it from a usually fatal condition to a treatable one
  Possibility of laboratory errors
  Potential for provoking anxiety, and risks for discrimination   social stigmatization could outweigh the benefits of testing
Genetic counseling
Genetic counseling  The process by which patients or relatives, at risk of an inherited disorder, are advised of the consequences and nature of the disorder, the probability of developing or transmitting it,
This complex process can be seen from diagnostic (the actual estimation of risk) and supportive aspects. When can we do counseling? Conception (i.e. when one or two of the parents are   carriers of a certain trait)During pregnancy (i.e. if an abnormality is noted on an   ultrasound  or if the woman will be over 35 at delivery)After birth (if a birth defect is seen)
During childhood (i.e. if the child has developmental    delay)During adulthood (for adult onset genetic conditions   such as  Huntington’s disease or hereditary cancer   syndromes).
The couple should be counselled by a genetic counsellor to inform them of the test results and the risks to the foetus.
Providing the options open to them in management and family planning in order to prevent, avoid or ameliorate it.
Autonomy of decision is crucial.
The ethical, legal, and religious issues should be respected.Direct-to-Consumer (DTC) genetic testing A type of genetic test that is accessible directly to    the consumer without having to go through a   health care professional. A variety of DTC tests, ranging from testing for    breast cancer alleles to mutations linked to cystic    fibrosis.  Benefits of DTC testing are the accessibility of    tests to consumers, promotion of proactive    healthcare and the privacy of genetic information.Risks of DTC testing are the lack of governmental   regulation and the potential misinterpretation of    genetic information.
Gene therapy
Gene therapy is the replacement of faulty genes.Introduction of functional genetic material into targetcells to replace or supplement defective genes, or to modify target cells so as to achieve therapeutic goals.
In theory it is possible to transform either somatic cells (most cells of the body) or cells of the germ line (such as sperm cells,ova, and their stem cell precursors).
All gene therapy so far in people has been directed at somatic cells.
Germ line engineering in humans remains only a highly controversial prospect.    For the introduced gene to be transmitted normally to offspring, it needs not only to be inserted into the cell, but also to be incorporated into the chromosomes by genetic recombination
Somatic Cell TherapyThis is when a gene is introduced into apatient to help them recover from a disease.
Germ Line TherapyChanges are made to genes that will affect subsequent generations.
Applications of Gene TherapyRadical cure of single gene diseases e.g.    cystic fibrosis, haemoglobinopathies.Amelioration of diseases with or without a genetic component e.g. malignancies, neurodegenerative diseases, infectious diseases.
Gene therapy concerns
Vectors in gene therapy:Non-viral methods Viruses Adeno-associated viruses Retroviruses Oligonucleotides Hybrid methods Lipoplexes and polyplexesAdenoviruses Naked DNA Envelope protein pseudotyping of viral vectors

Genetic screening & gene therapy

  • 1.
    GENETIC SCREENING &GENE THERAPYGenetic screening & Gene therapyDr. Dinesh TJunior resident,Department of Physiology, JIPMERDr sclerodinesh
  • 2.
    Introduction
  • 4.
    HistoryTechnology to detectand treat inborn diseases - 1961. 1972 Friedmann and Roblin authored a paper in Science titled "Gene therapy for human genetic disease?“The late 1980's, an international team of scientists began the project to map the human genome.September 14, 1990 - first approved gene therapy case in the United States took place.
  • 5.
    1992 - DoctorClaudio Bordignon, Milan, Italy performed the first procedure of gene therapy using hematopoietic stem cells.1995 DNA testing in forensic cases gains fame in the O.J. Simpson trial. 2002 - first successful gene therapy treatment for adenosine deaminase-deficiency (SCID)2003 – at University of California, Los Angeles research team inserted genes into the brain using liposome coated in a polymer called polyethylene glycol
  • 6.
    2006 - PrestonNix from the University of Pennsylvania School of Medicine reported on VRX496, a gene-based immunotherapy for the treatment of human immunodeficiency virus (HIV) that uses a lentiviral vector for delivery of an antisense gene against the HIV envelope 2007 – Moorfields Eye Hospital and University College London's Institute of Ophthalmology announced the world's first gene therapy trial for inherited retinal disease 2008 there were more than 1,200 clinically applicable genetic tests available.
  • 7.
  • 8.
    What is geneticscreening?The newest and most sophisticated of the techniques used to test for genetic disorders. One of the fastest moving fields in medical science.A technique to determine the genotype or phenotype of an organism.Determines risk of having or passing on a genetic disorder.
  • 9.
    Genetic screeningGenetic screening is often used to detect faulty or abnormal genes in an organismCan detect some genes related to an increasedrisk of cancerCan detect some genes known to cause geneticdisorders
  • 10.
    Genetic tests The analysis of chromosomes (DNA), proteins, and certain metabolites in order to detect heritable disease-related genotypes, mutations, phenotypes, or karyotype for clinical purposes.
  • 11.
    Gene tests (alsocalled DNA-based tests), in a broader senseDirect examination of the DNA molecule Biochemical tests for such gene products as enzymes and other proteinsMicroscopic examination of stained or fluorescent chromosomes
  • 12.
    Genetic tests Whocan order?What are the samples needed?How to interpret the tests?What are all the risks?Ethical considerations?
  • 13.
    Types of screeningtests Carrier screening
  • 14.
    Prenatal diagnostic testing
  • 15.
    Newborn screening
  • 16.
    Pre symptomatic testing for predicting adult-onset disorders such as Huntington's disease Pre symptomatic testing for estimating the risk of developing Adult-onset cancers and Alzheimer's disease. Conformational diagnosis of a symptomatic individual
  • 17.
    Preimplantation genetic diagnosis
  • 18.
    Forensic/identity testing
  • 19.
  • 20.
  • 21.
    Genetic screeningAdult PolycysticKidney Disease Alpha-1-antitrypsin deficiency Amyotrophic lateral sclerosis Alzheimer's diseaseAtaxia telangiectasiaCentral Core DiseaseCharcot-Marie-Tooth diseaseCongenital adrenal hyperplasia Cystic fibrosis Duchenne muscular dystrophy/Becker muscular dystrophy DystoniaEmanuel SyndromeFanconianemia, group C Factor V-Leiden Fragile X syndrome Gaucher disease Hereditary HemochromatosisHuntington's disease Hereditary nonpolyposis colon cancerHemophilia A and B Inherited breast and ovarian cancerMarfan SyndromeMucopolysaccharidosiMyotonic dystrophy Neurofibromatosis type 1 PhenylketonuriaPolycystic Kidney DiseasePraderWilli/Angelman syndromes Sickle cell disease Spinocerebellar ataxia, type Spinal muscular atrophy Tay-Sachs Disease ThalassemiasTimothy Syndrome Galactosemia
  • 22.
  • 23.
    Indications for prenataldiagnosis Abnormal results in prenatal screening
  • 24.
    Previous child with a chromosome abnormality (probability of translocation carrier in parents) Family history of a chromosome abnormality
  • 25.
    Family history of a single gene disorder
  • 26.
    Family history of neural tube defect or other congenital abnormalities
  • 27.
    Newborn Screening Tests:MapleSyrup Urine DiseaseCongenital Adrenal HyperplasiaCongenital HypothyroidismGlactosemiaBiotinidase DeficiencyHomocystinuriaPhylketonuria (PKU)Sickle cell and Other Hemoglobinopathies
  • 28.
    Pre implantation GeneticDiagnosis (PGD)Pre implantation Genetic Diagnosis (PGD) uses in vitro fertilisation (IVF) to create embryos.Tests one or two cells from each embryo for a specific genetic abnormality.Identifies unaffected embryos for transfer to the uterus.The approach through PGD assists couples at risk of an inherited disorder to avoid the birth of an affected child without going through selective pregnancy termination.
  • 29.
    Pros and conesof gene testing To clarify a diagnosis and direct a physician
  • 30.
    Toavoid having children with devastating diseases
  • 31.
    Identifypeople at high risk
  • 32.
    Provide doctors witha simple diagnostic test
  • 33.
    Transforming it froma usually fatal condition to a treatable one
  • 34.
    Possibilityof laboratory errors
  • 35.
    Potentialfor provoking anxiety, and risks for discrimination social stigmatization could outweigh the benefits of testing
  • 36.
  • 37.
    Genetic counseling The process by which patients or relatives, at risk of an inherited disorder, are advised of the consequences and nature of the disorder, the probability of developing or transmitting it,
  • 38.
    This complex processcan be seen from diagnostic (the actual estimation of risk) and supportive aspects. When can we do counseling? Conception (i.e. when one or two of the parents are carriers of a certain trait)During pregnancy (i.e. if an abnormality is noted on an ultrasound or if the woman will be over 35 at delivery)After birth (if a birth defect is seen)
  • 39.
    During childhood (i.e.if the child has developmental delay)During adulthood (for adult onset genetic conditions such as Huntington’s disease or hereditary cancer syndromes).
  • 40.
    The couple shouldbe counselled by a genetic counsellor to inform them of the test results and the risks to the foetus.
  • 41.
    Providing the optionsopen to them in management and family planning in order to prevent, avoid or ameliorate it.
  • 42.
  • 43.
    The ethical, legal,and religious issues should be respected.Direct-to-Consumer (DTC) genetic testing A type of genetic test that is accessible directly to the consumer without having to go through a health care professional. A variety of DTC tests, ranging from testing for breast cancer alleles to mutations linked to cystic fibrosis. Benefits of DTC testing are the accessibility of tests to consumers, promotion of proactive healthcare and the privacy of genetic information.Risks of DTC testing are the lack of governmental regulation and the potential misinterpretation of genetic information.
  • 44.
  • 45.
    Gene therapy isthe replacement of faulty genes.Introduction of functional genetic material into targetcells to replace or supplement defective genes, or to modify target cells so as to achieve therapeutic goals.
  • 46.
    In theory itis possible to transform either somatic cells (most cells of the body) or cells of the germ line (such as sperm cells,ova, and their stem cell precursors).
  • 47.
    All gene therapyso far in people has been directed at somatic cells.
  • 48.
    Germ line engineeringin humans remains only a highly controversial prospect. For the introduced gene to be transmitted normally to offspring, it needs not only to be inserted into the cell, but also to be incorporated into the chromosomes by genetic recombination
  • 49.
    Somatic Cell TherapyThisis when a gene is introduced into apatient to help them recover from a disease.
  • 50.
    Germ Line TherapyChangesare made to genes that will affect subsequent generations.
  • 51.
    Applications of GeneTherapyRadical cure of single gene diseases e.g. cystic fibrosis, haemoglobinopathies.Amelioration of diseases with or without a genetic component e.g. malignancies, neurodegenerative diseases, infectious diseases.
  • 52.
  • 53.
    Vectors in genetherapy:Non-viral methods Viruses Adeno-associated viruses Retroviruses Oligonucleotides Hybrid methods Lipoplexes and polyplexesAdenoviruses Naked DNA Envelope protein pseudotyping of viral vectors
  • 55.
    Gene therapy usingan adenovirus vector.A new gene is inserted into an adenovirus vector, which is used to introduce the modified DNA into a human cell. If the treatment is successful, the new gene will make a functional protein.
  • 56.
    Non viral vectorsUncomplexed plasmid DNA DNA coated gold particlesLiposomesDNA – protein conjugates
  • 57.
    Modes of introducinggenetic material
  • 58.
    Un complexed PlasmidDNAPurified DNA or mRNA injected directly into tissues Injected into muscle and skin• Utility in immunization/ vaccination against Infectious diseases • Ectopic synthesis of therapeutic proteins as erythropoietin.
  • 59.
    DNA coated Goldparticles Plasmid DNA + Gold particles ( 1 micron india)
  • 60.
    “shot” intocells using electric spark or pressurized gas – “gene gun” Epidermis
  • 61.
    Skin tumours(melanomas)
  • 62.
    Gene mediatedimmunizationLiposomes• DNA surrounded by hydrophobic molecules• Anionic – given i.v. Targets reticuloendothelial cells of liver• Cationic – transgene expression in most tissues if given in afferent blood supply• Intra airway injection or aerosol to target -lung epithelium
  • 63.
    DNA- Protein conjugates•Cell- specific DNA delivery systems• Utilize unique cell surface receptors ontarget cells• Chemical cross linking methods used
  • 64.
    Methods Anormal gene may be inserted into a nonspecific location within the genome to replace a nonfunctional gene. An abnormal gene could be swapped for a normal gene through homologous recombination. The abnormal gene could be repaired through selective reverse mutation, which returns the gene to its normal function. The regulation (the degree to which a gene is turned on or off) of a particular gene could be altered.
  • 65.
    Gene Transfer techniques•In vivoSuspension containing vector is injecteddirectly into the patient either systemically (i.v.)or directly into target tissue (e.g. malignanttumour)• Ex vivoTarget cells (stem cells,myoblasts,fibroblastsetc) removed from the patient, treated withvector and injected back into the patient
  • 69.
    Spectrum of geneexpressionGene replacement for single gene disordersGene repairGene inactivationEctopic synthesis of therapeutic proteinsCancer gene therapy
  • 70.
    A) Immunodeficiency DisordersAdenosine Deaminase Deficiency X- linked SCID Chronic Granulomatous diseaseB) Liver DiseaseFamilial HypercholesterolemiaHaemophilia ATarget diseases
  • 71.
    HemoglobinopathiesD) Lung Diseases • Cystic Fibrosis• α- 1 Antitrypsin DeficiencyE) Skeletal Muscle • Duchene Muscular Dystrophy • Limb Girdle Muscular Dystrophy
  • 72.
  • 73.
    Difficult to treatmulti gene or multi factorial disease
  • 74.
    Inserting gene intocorrect cells.
  • 75.
    Controlling gene expression.Possibility of over expression
  • 76.
    Damage to thehost gene
  • 77.
  • 78.
    Chance of inducinga tumour (insertional mutagenesis) Conclusion
  • 79.