This document discusses advances in gastrointestinal stromal tumors (GIST), including: 1. Common mutations found in KIT (CD117) receptor tyrosine kinase that are associated with GIST and their sensitivity to tyrosine kinase inhibitors (TKIs). 2. Treatment algorithms for patients with resectable or unresectable/metastatic GIST based on mutational profiling. 3. Studies of various TKIs for imatinib-resistant GIST as well as novel agents targeting mTOR and HSP90 pathways for refractory disease.