Plant biotechnology can be defined as the use of tissue culture and genetic engineering techniques to produce genetically modified plants that exhibit new or improved desirable characteristics.
PLANT BIOTECHNOLOGY HELPS PLANT PATHOLOGY IN MANY WAYS.
Role of biotechnology - gene silencing in plant disease controlAshajyothi Mushineni
An overview of role of biotechnology especially gene silencing approach in plant disease control and success achieved so far and way forward and it's importance in developing countries
The concept of gene for gene hypothesis was first developed by Flor in 1956 based on his studies of host pathogen interaction in flax, for rust caused by Melampsora lini. The gene for gene hypothesis states that for each gene controlling resistance in the host, there is corresponding gene controlling pathogenicity in the pathogen. The resistance of host is governed by dominant genes and virulence of pathogen by recessive genes. The genotype of host and pathogen determine the disease reaction. When genes in host and pathogen match for all loci, then only the host will show susceptible reaction. If some gene loci remain unmatched, the host will show resistant reaction. Now gene – for –gene relationship has been reported in several other crops like potato, sorghum, wheat, etc. The gene for gene hypothesis is also known as “Flor Hypothesis.”
Role of biotechnology - gene silencing in plant disease controlAshajyothi Mushineni
An overview of role of biotechnology especially gene silencing approach in plant disease control and success achieved so far and way forward and it's importance in developing countries
The concept of gene for gene hypothesis was first developed by Flor in 1956 based on his studies of host pathogen interaction in flax, for rust caused by Melampsora lini. The gene for gene hypothesis states that for each gene controlling resistance in the host, there is corresponding gene controlling pathogenicity in the pathogen. The resistance of host is governed by dominant genes and virulence of pathogen by recessive genes. The genotype of host and pathogen determine the disease reaction. When genes in host and pathogen match for all loci, then only the host will show susceptible reaction. If some gene loci remain unmatched, the host will show resistant reaction. Now gene – for –gene relationship has been reported in several other crops like potato, sorghum, wheat, etc. The gene for gene hypothesis is also known as “Flor Hypothesis.”
plant pathogen interaction
different types of pathogens
gene for gene hypothesis
direct receptor model
Elicitor receptor model
suppersor repressor model
gaurd hypothesis
Content:
Introduction
Importance of Host Plant Resistance
Historical perspectives
Advantages and Disadvantages of HPR
Mechanisms of Resistance
Adaptation of Resistance in Plant to Insect
Morphological
Anatomical
Biochemical
Assembly of plant species - Gene Pool
Behavior in Relation to Host Plant Factor
plant pathogen interaction
different types of pathogens
gene for gene hypothesis
direct receptor model
Elicitor receptor model
suppersor repressor model
gaurd hypothesis
Content:
Introduction
Importance of Host Plant Resistance
Historical perspectives
Advantages and Disadvantages of HPR
Mechanisms of Resistance
Adaptation of Resistance in Plant to Insect
Morphological
Anatomical
Biochemical
Assembly of plant species - Gene Pool
Behavior in Relation to Host Plant Factor
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
This presentation explores a brief idea about the structural and functional attributes of nucleotides, the structure and function of genetic materials along with the impact of UV rays and pH upon them.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
What is greenhouse gasses and how many gasses are there to affect the Earth.
Biotechnology and disease management with special reference to
1. BIOTECHNOLOGY IN FUNGAL AND
BACTERIAL DISEASE MANAGEMENT
Submitted by:
K Sarda Devi
Adm no: 2A-15(PhD)
Submitted to:
Dr Bireswar Sinha
Asst. Professor
DEPARTMENT OF PLANT PATHOLOGY, COLLEGE OF AGRICULTURE,
CENTRAL AGRICULTURAL UNIVERSITY, IMPHAL
PLPATH-604
2. INTRODUCTION
o Plant diseases are of paramount importance to humans and so is their
management evident from Important historical evidences of plant disease
epidemics such as Irish Famine due to late blight of potato (Ireland, 1845),
Bengal famine due to brown spot of rice (India, 1942) , Coffee rust (Sri Lanka,
1967) etc., which had left their effect on the economy of the affected
countries.
o Plant Diseases destructs crop production with annual contribution of
14.1%.
o Chemical control for plant disease has its concern on environment at large,
thus as alternative concept of molecular plant pathology & biotechnology sets
diagnostic tools , techniques for disease management.
3. Def: Plant biotechnology can be defined
as the use of tissue culture and genetic
engineering techniques to produce
genetically modified plants that exhibit
new or improved desirable characteristics.
4. PRO’S
1) Desirable characters :
better yields & quality
greater resistance to adverse
factors, including diseases,
pests, and environmental
conditions such as freezes,
drought, and salinity.
2) Production of GM crop
plants that avoid or resist
certain plant pathogens.
CON’S
1) Replaces numerous
sustainable
local varieties with few
genetically
engineered ones.
2) Development of pests and
pathogens that can resist OR
overcome the transformed
resistant crops.
3) Unknown numbers of
non target organisms affected
adversely .
6. Plants have been
rendered resistant to
specific pathogens by
genetically
engineering
(transforming) them
with isolated specific
genes that provide
resistance against
these pathogens
known as transgene.
Transformed plants
become resistant
by coding for enzymes
that mobilize other
enzymes that carry
out numerous
defensive functions,
such as breaking
down the structural
compounds of the
pathogen.
MECHANISM
RECOMBINANT DNA TECHNOLOGY
7. Resistance against bacterial and fungal
diseases are sought to be generated by
expression of the following transgenes:
1) Genes encoding insensitive target enzymes.
2) Genes specifying toxin inactivation & expression of
antibacterial peptides, bacterial lysozymes.
3) Genes specifying heterologous phytoalexins &
thionins.
4) Ectopic expression of PRP’s, chitinases.
5) Genes specifying artificially PCD.
8. PROTOPLAST
FUSION:
Introgression of
genes for
resistance
CHEMICALLY
INDUCED FUSION:
Chemicals tends to
increase fusion.
Polyethyleneglycol
(PEG) is commonly
used as fusogen.
Agrobacterium
tumefaciens or its
modified T-plasmid are
used to introduced
foreign DNA/RNA into
plant cell.
TISSUE CULTURE TECHNIQUES
9. RNA- interference technique
RNA Silencing, phenomena taking place.
Custom knock down of the gene activity.
Gene targeting in fungi, bacteria and virus.
DUE TO POST TRANSCRIPTIONAL
GENE SILENCING
10. MOLECULAR MARKERS IN DISEASE
MANAGEMENT
Molecular markers linked to various resistance
genes are used for marker assisted selection for
resistance breeding, gene pyramiding, map
based cloning of resistance genes.
11. Potato plants engineered with a chimeric gene encoding
two insect proteins exhibiting antimicrobial activities
showed significant resistance to the late blight oomycete
and their tubers were protected in storage from infection
by the soft rot-causing bacteria.
Raspberry plants engineered with the gene coding for the
common plant polygalacturonase-inhibiting protein (PGIP)
became resistant to the gray mold fungus Botrytis cinerea,
although the transgene in raspberry, but not in other
plants, is expressed only in immature green fruit.
APPLICATIONS
(A) TRANSGENIC PLANT DISEASE MANAGEMENT:
12. Indica rice varieties IR64, IR72, were co-transformed by
microbombardment of embryogenic suspensions with
plasmids that contain the Xa21 gene which confers
resistance to Xanthomonas oryzae pv. Oryzae.
13. Candidate Genes against Bacterial Pathogen: A Toxin
inactivating gene, “ttr” isolated from Pseudomonas
tabaci cloned into Tobacco cultivars showed wildfire
disease resistance.
Candidate Genes against Fungal Pathogen: PR- protein
like genes encoding chitinases and B-1,3 Glucanases
increases expression of individual and multiple PR –
proteins in various crops demonstrating enhanced
disease resistance against particular pathogens like e.g.,
in rice Rhizoctonia solani, the sheath blight pathogen.
14. ARTIFICIAL PCD(SINGLE COMPONENT SYSTEM)
:
In transgenic potato with barnase gene
under the control of infection specific
Promoter prp 1 – 1, ensures the control of
Phytophthora infestans by the action of
barnase protein, an RNAse leading to host cell
death along with the pathogen.
15. Nontoxic chemical substances
when applied to plants
externally, stimulate the
plants and elicit the activation
of their natural defense
mechanisms, i.e., activation of
the localized defense
mechanism (hypersensitive
response) and systemic-
acquired resistance (SAR). Two
such chemical substances used
commercially are Actigard &
Messenger
Actigard in one application
increases the plants’ resistance
against some bacterial and some
fungal diseases for several weeks,
and
Messenger, derived from the fire
blight bacterium gene coding for the
protein harpin, which elicits a
hypersensitive response and SAR in
plants
(B) DEVELOPMENT & USE OF NON TOXIC CHEMICAL SUBSTANCES
16. C) TISSUE CULTURE IN DISEASE MANAGEMENT
Disease Resistant Plants Produced from PROTOPLAST FUSION
SPECIES used for disease resistance
1. Latuca sativa against Downy mildew(Bremia lactucae)
2. Brassica oleracea and Raphanus sativus against club
root(Plasmodiophora brassicae)
3. Brassica napus & Brassica nigra against Black leg(Phoma
lingum) & club root
4. Solanum brevidens and Solanum tuberosum against Bacterial
soft rot(Erwinia spp)
17. RNAi IN DISEASE MANAGEMENT
RNAi Technology
has emerged as one of the most
potential and promising strategies
to combat diseases against fungi,
bacteria, virus & nematode.
Amongst fungi, disease
resistance can be created against
includes Cladosporium fulvum,
Magnaporthae grisea, Venturia
inaequalis & Neurospora crassa.
18. CONCLUSION
PLANT BIOTECHNOLOGY HELPS PLANT PATHOLOGY IN MANY
WAYS SUCH AS
1) TO OBTAIN PATHOGEN FREE MOTHER PLANTS THROUGH
CLONAL PROPAGATION.
2) NEW PLANTS TO WHICH GENES OF DESIRE HAS BEEN
INCORPORATED THROUGH GENETIC ENGENEERING.
3) STUDY OF PLANT AND PATHOGEN GENES FOR
RESISTANCE AND VIRULENCE RESPECTIVELY HAS
CONSIDERABLY BEEN ADDED BY GENETIC ENGENEERING.
4) ALTHOUGH HAVING MANY BENEFICIAL SIDES TO PLANT
BIOTECHNOLOGY AND ITS APPLICATION, THEIR STILL
SEEMS TO OCCUR A LARGE LOOPHOLE TO BE MENDED.
19. REFERENCES:
1) Neelam Geat & Devendra Singh, IARI New Delhi, Role of
Biotechnology in plant disease management ,Biotech Articles ,
2015-10-31
2) Agrios G.N. (1969) Plant Pathology, Academic Press, 5th
edition, pg.56-58