Biodegradation is the chemical dissolution of materials by bacteria or other biological means.
biodegradable simply means to be consumed by microorganisms and return to compounds found in nature
2. BIODEGRADATION
• Biodegradation (i.e. biotic degradation) is a chemical degradation of
materials (i.e. polymers) provoked by the action of microorganisms such as
bacteria, fungi and algae.
• Biodegradation is expected to be the major mechanism of loss for most
chemicals released into the environment.
• This process refers to the degradation and assimilation of polymers by living
microorganisms to produce degradation products.
• Biodegradable materials degrade into biomass, carbon dioxide and methane.
In the case of synthetic polymers, microbial utilization of its carbon backbone
as a carbon source is required.
• Natural polymers (i.e., proteins, polysaccharides, nucleic acids) are degraded
in biological systems by oxidation and hydrolysis.
3. MICROORGANISMS IN BIODEGRADATION
BACTERIA
• Bacteria important in the biodegradation process include, inter alia, Bacillus (capable of
producing thick-walled endospores that are resistant to heat, radiation and chemical
disinfection)
• Pseudomonas, Klebsiella, Actinomycetes, Nocardia, Streptomyces, Thermoactinomycetes,
Micromonospora, Mycobacterium, Rhodococcus, Flavobacterium, Comamonas, Escherichia,
Azotobacter and Alcaligenes(some of them can accumulate polymer up to 90% of their dry
mass).
FUNGI
• Fungi active in the biodegradation process are Sporotrichum, Talaromyces, Phanerochaete,
Ganoderma, Thermoascus, Thielavia, Paecilomyces, Thermomyces, Geotrichum,
Cladosporium, Phlebia, Trametes, Candida, Penicillium, Chaetomium, andAerobasidium .
4. TYPES OF BIODEGRADATION
The biodegradation process can be divided into
• Aerobic degradation
• Anaerobic degradation
Aerobic biodegradation:
Polymer + O2 -> CO2 + H2O + biomass + residue(s)
Anaerobic biodegradation:
Polymer -> CO2 + CH4 + H2O + biomass+ residue(s)
If oxygen is present, aerobic biodegradation occurs and carbon dioxide is produced.
If there is no oxygen, an anaerobic degradation occurs and methane is produced instead of
carbon dioxide .
The chemical structure (responsible for functional group stability, reactivity, hydrophylicity
and swelling behavior) is the most important factor affecting the biodegradability of polymeric
materials. Other important factors are inter alia, physical and physico-mechanical properties,
e.g., molecular weight, porosity, elasticity and morphology
7. BIODEGRADATION OF SYNTHETIC PRODUCTS
SYNTHETIC COMPOUNDS(XENOBIOTICS)
• Nitro aromatic compounds (NACs), polycyclic aromatics and other hydrocarbons (PAHs)
that are constituents of crude oil, and halogenated organic compounds together constitute
a large and diverse group of chemicals that are responsible for causing widespread
environmental pollution.
• Xenobiotics are manmade compounds, frequently halogenated hydrocarbons, that are
notoriously difficult for microbes to breakdown in the environment. Biodegradation of
synthetic materials is complicated.
• Anaerobic bacteria able to degrade xenobiotics are present in various anaerobic habitats,
inter alia sediments, water laden soils, reticuloruminal contents, gastrointestinal contents,
sludge digesters, feedlot wastes, groundwater, and landfill sites.
• D. oleovorans, G. metallireducens, D. acetonicum, Acidovorax, Bordetella, Pseudomonas,
Sphingomonas, Variovorax, Veillonella alkalescens, Desulfovibrio spp., Desulfuromonas
michiganensis, and Desulfitobacterium halogenans are the major groups of anaerobic
microorganisms involved in biodegradation of xenobiotic compounds.
8. BIODEGRADATION OF AROMATIC COMPOUNDS
• Aromatic compounds are ubiquitous in nature.
• Most are not of biosynthetic origin but are derived from the pyrolysis of organic compounds.
• Benzene ring is the most widely distributed unit of chemical structure in nature. Benzene,
ethyl benzene, toluene, styrene, and the xylenes are among the 50 largest-volume industrial
chemicals produced, with production figures of the order of millions of tons per year. These
mentioned compounds are widely used as fuels and industrial solvents.
• Provide the starting materials for the production of pharmaceuticals, polymers,
agrochemicals, and more .
• Aromatic compounds can be degraded under nitrate-reducing, iron-reducing, sulfate-reducing,
and methanogenic conditions.
• Aerobic degradation of aromatic compounds involves their oxidation by molecular oxygen.
• Microorganisms use oxygen (during aerobic respiration) to hydroxylate the benzene ring
,finally the aromatic double bonds are cleaved to degrade the aromatic compounds.
• Pseudomonas, Ralstonia, Burkholderia, Sphingomonas, Flavo- bacterium , Bacillus and
marine sulfate reducing bacteria (that use sulfate as the electron acceptor)..are some of the
examples of microbes degrading aromatic compounds.
9. BIODEGRADATION OF PLASTICS
• There are different mechanisms for the degradation of plastics: thermal, chemical, photo and
biodegradation.
• Polyethylene is a synthetic polymer having high hydrophobic level and high molecular weight.
• Polyurethanes (PU) represent the most common class of polymers which is used in the
medical, automotive and industrial fields.
• polymers are consumed by various microorganisms as carbon and energy sources and various
enzymes like polyhydroxyalkanoates (PHA) depolymerases secreted by them help in the
degradation of plastics.
• Some of those bacteria that can degrade polyester in vitro and which utilize the PUR as sole
carbon source have been identified from the genera Pseudomonas, Comamonas, and Bacillus.
• Emericella, Trichoderma, Aspergillus, Fusarium, Gliocladium and Penicillium. Geomyces
pannorum was found to be the predominant plastic degrading fungi.
10. PVA BIODEGRADATION
• Poly(vinyl)alcohol is a vinyl polymer in which the main chains are joined by only carbon-carbon
links.
• first report of degradation by Fusarium lini .
• Scientists have isolated the Pseudomonas bacteria from soil bacterium growing on PVA as
the source of carbon. Pseudomonas is the main PVA degrader.
• This bacterium produces and secretes an enzyme that degrades PVA.
• Polivinyl alcohol dehydrogenase (PVADH) from Pseudomonas ssp.
POLY CAPROLACTONE
• PCL is a synthetic linear polyester with almost 50% crystallinity.
• It is biologically degradable , the environmental degradation of PCL is affected by the
actions of bacteria that are widely distributed in the ecosystem.
• some filamentous fungi and yeasts also can hydrolyze PCL to water-soluble products.
• Pullularia pullulans can efficiently degrade a lower molecular weight PCL film
• PCL degrading microorganisms that produce different types of PCL hydrolases and lipases
of R. delemar and Rhizopus arrhizus.
• Ester-linkages of PCL are easy to hydrolyze by microbial enzyme degradation.
11. POLY L-LACTIDE (PLA)
• PLA is a biocompatible thermoplastic with a melting temperature of 175ºC.
• It is synthesized by the polymerization of L-lactic acid.
• PLA can be hydrolyzed by the lipase from R. delemar and the proteinase K from
Tritirachium album and also by the polyester polyurethane depolymerase from
Comamonas acidovorans.
• PLA is more resistant to microbial attack in the environment than other microbial and
synthetic polyesters.
POLYESTERS
• Monomers are bonded by ester linkages.
• Enzymes that degrade this polymer are ubiquitous in living organisms (e.g.,
Thermomonosfora Fusca and Streptomyces albus).
• The most important factors affecting biodegradability are molecular mass and crystallinity
12. POLYETHYLENE (PE)
• Polyethylene is widely used for various one-trip applications like food packaging, retail
industry uses and agricultural uses.
• PE is the most problematic plastic that is resistant to microbial attack.
• Polyethylene is a synthetic polymer with –CH2-CH2 repeating units in the polymer backbone.
• This polymer is resistant to biodegradation, which results from highly stable C-C and C-H
covalent bonds and high molecular weight.
• The mechanism of biodegradability of polyethylene includes alteration by adding a carbonyl
group (C=O) in the polymer backbone.
• The altered polyethylene molecule undergoes biotic oxidation.
carbonyl groups(In PE)
mono oxygenase enzyme
alcohol
alcohol dehydrogenase
aldehyde
aldehyde dehydrogenase
Fatty acid
Undergo biodegradation
13. NYLON
• Nylons are produced in large quantities as fibers and plastics all over the world.
• Nylon is one of the most important synthetic polymers.
• The very poor biodegradability of nylon due to its strong intermolecular cohesive force caused
by hydrogen bonds between molecular chains.
• Nylon is a synthetic polyamide with repeating amide groups (-CONH-) in its backbone.
• Bacterium Geobacillus thermocatenulatusis used to biodegrade nylon 12 and nylon 66.
• Bacterial degradation of nylon 12 is associated with the enzymatic hydrolysis of amine bonds.
• Some forms of nylons have been shown to biodegrade by fungi and bacteria.
14. MECHANISM OF ENZYMATIC BIODEGRADATION
Microorganisms
Secretion of extracellular enzymes
Adherence of enzymes to the plastic surface
Cleavage of polymer chains
Erosion of plastic surface i.e Biodegradation
End products like CO2, H2O and CH4 are produced
15. MECHANISM OF ENZYMATIC BIODEGRADATION
• The most attractive plastic waste treatment method is enzymatic degradation.
• Polyethylene degradation through microbial enzymes comprises two steps.
• Firstly enzyme adheres to the polyethylene substrate and then catalyzes a hydrolic cleavage.
• Intracellular and extracellular depolymerases in fungi and bacteria degrade the polyethylene.
• Complex polymers disintegrate into short chains of oligomers, dimers, and monomers which
can pass through the bacterial membranes and act as a source of carbon and energy. This
process is referred as depolymerisation. And mineralization is the degradation process in
which the end products are carbon dioxide (CO2), water (H2O) or methane (CH4) are
produced .
• Temperature, pressure and moisture are the physical parameters which mechanically damage
the polymers due to which the biological forces like enzymes and other metabolites produced
by microbes induce the process.
16. ENZYMES VARIES WITH PLASTICS
Enzymes are very specific in their action on substrates, so the different enzymes help in the
degradation.
Laccase
• produced by the actinomycete R.ruber, involved in biodegradation of polyethylene. Laccases
are mostly present in lignin- biodegrading fungi, where they catalyze the oxidation of
aromatic compounds. Laccase activity is known to act on non-aromatic substrates
Papain and urease
• are the two proteolytic enzymes were found to degrade medical polyester polyurethane.
Polymer degraded by papain was due to the hydrolysis of urethane and urea linkages
producing free amine and hydroxyl groups.
Some strains which are capable of degrading the polyethylene are Brevibacillus spp., Bacillus
spp., where proteases are responsible for degradation .
The enzymes responsible for biodegradation by Pseudomonas spp. are serine hydrolases,
esterases and lipases
17. SIGNIFICANCE OF ENZYME BIODEGRADATION
Biodegradation process is very eco-friendly. The growth of the microbes responsible for
biodegradation must be optimized by controlling the temperature, humidity, incubation time and
the substrate like polyethylene, polyurethane which are consumed as a carbon and energy
source. This helps in the production of large amount of enzyme. These microbial enzymes induce
the rate of biodegradation of plastics very effectively without causing any harm to the
environment
18. BIOPLASTICS
• Bioplastics are biodegradable plastics. It means these types of plastics are either produced
from fossil materials or can be synthesized from biomass or renewable resources.
• Plastics can be biodegradable by improving the hydrophilic level, or polymer chain length can
be reduced by oxidation which is to be accessible by microbial growth.
• Some polymers are being used for the manufacture of biodegradable plastics like
polyhydroxybutyrate (PHB) and copolymers containing other hydoxyalkanotes. These
polymers are consumed by various microorganisms as carbon and energy sources and various
enzymes like polyhydroxyalkanoates (PHA) depolymerases secreted by them help in the
degradation of these types of plastics .
• The major advan- tages of biodegradable plastics are that they can be com- posted with
organic wastes and returned to enrich the soil.
• Their use will not only reduce injuries to wild animals caused by dumping of conventional
plastics, but will also lessen the labor cost for the removal of plastic wastes in the environment
• They could be recycled to useful monomers and oligomers by microbial and enzymatic
treatment.
Editor's Notes
Hydrophylicity , molecule or other molecular entity that is attracted to, and tends to be dissolved by, water.
Nitro compounds are organic compounds that contain one or more nitro functional groups (–NO2). They are often highly explosive
(PAHs, also polyaromatic hydrocarbons) are hydrocarbons—organic compounds containing only carbon and hydrogen—that are composed of multiple aromatic rings
Pyrolysis is a thermochemical decomposition of organic material at elevated temperatures in the absence of oxygen (or any halogen). It involves the simultaneous change of chemical composition and physical phase, and is irreversible.
Hydroxylation is a chemical process that introduces a hydroxyl group (-OH) into an organic compound.